RNA–Protein interactions for RNA: ENST00000551845.5

PTCH1-225, Transcript of patched 1, humanhuman

TSL 5

Gene PTCH1, Length 809 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-225ENST00000551845 PRYO14603 147 aa6.41□□□□□ -1.38
PTCH1-225ENST00000551845 IFITM1P13164 125 aa6.41□□□□□ -1.38
PTCH1-225ENST00000551845 DDTP30046 118 aa6.41□□□□□ -1.38
PTCH1-225ENST00000551845 LINC00518Q8N0U6 118 aa6.41□□□□□ -1.38
PTCH1-225ENST00000551845 SPANXCQ9NY87 97 aa6.41□□□□□ -1.38
PTCH1-225ENST00000551845 KRTAP10-8P60410 259 aa6.4□□□□□ -1.38
PTCH1-225ENST00000551845 PRLHP81277 87 aa6.4□□□□□ -1.38
PTCH1-225ENST00000551845 SPANXDQ9BXN6 97 aa6.4□□□□□ -1.38
PTCH1-225ENST00000551845 CBY1Q9Y3M2 126 aa6.4□□□□□ -1.38
PTCH1-225ENST00000551845 MT1HL1P0DM35 61 aa6.39□□□□□ -1.39
PTCH1-225ENST00000551845 JOSD1Q15040 202 aaPredicted RBP6.39□□□□□ -1.39
PTCH1-225ENST00000551845 KRTAP13-1Q8IUC0 172 aa6.39□□□□□ -1.39
PTCH1-225ENST00000551845 LINC00337Q8N6G1 96 aa6.39□□□□□ -1.39
PTCH1-225ENST00000551845 OR13C6PQ8NH95 151 aa6.39□□□□□ -1.39
PTCH1-225ENST00000551845 ETDCA0A1B0GVM5 59 aa6.38□□□□□ -1.39
PTCH1-225ENST00000551845 IGLV6-57P01721 117 aa6.38□□□□□ -1.39
PTCH1-225ENST00000551845 SPRR1AP35321 89 aa6.38□□□□□ -1.39
PTCH1-225ENST00000551845 MUSTN1Q8IVN3 82 aa6.38□□□□□ -1.39
PTCH1-225ENST00000551845 HINT1P49773 126 aaPredicted RBP6.37□□□□□ -1.39
PTCH1-225ENST00000551845 PRR26Q8N8Z3 221 aa6.37□□□□□ -1.39
PTCH1-225ENST00000551845 HIGD2AQ9BW72 106 aa6.37□□□□□ -1.39
PTCH1-225ENST00000551845 PPDPFQ9H3Y8 114 aa6.37□□□□□ -1.39
PTCH1-225ENST00000551845 TRAV23DV6A0A075B6W5 121 aa6.36□□□□□ -1.39
PTCH1-225ENST00000551845 KRTAP1-4P0C5Y4 121 aa6.36□□□□□ -1.39
PTCH1-225ENST00000551845 RNF213Q63HN8 5207 aa6.36□□□□□ -1.39
PTCH1-225ENST00000551845 KRTAP4-16G5E9R7 235 aaPredicted RBP6.35□□□□□ -1.39
PTCH1-225ENST00000551845 COX8AP10176 69 aa6.35□□□□□ -1.39
PTCH1-225ENST00000551845 RPL13AP40429 203 aaKnown RBP6.35□□□□□ -1.39
PTCH1-225ENST00000551845 VAMP8Q9BV40 100 aa6.35□□□□□ -1.39
PTCH1-225ENST00000551845 KRTAP4-8Q9BYQ9 185 aa6.35□□□□□ -1.39
PTCH1-225ENST00000551845 B5MCH6 92 aa6.34□□□□□ -1.39
PTCH1-225ENST00000551845 DLEU1O43261 78 aa6.34□□□□□ -1.39
PTCH1-225ENST00000551845 ZNF73O43830 326 aaPredicted RBP6.34□□□□□ -1.39
PTCH1-225ENST00000551845 CRYGAP11844 174 aa6.34□□□□□ -1.39
PTCH1-225ENST00000551845 SPATA45Q537H7 98 aa6.34□□□□□ -1.39
PTCH1-225ENST00000551845 SMCR5Q8TEV8 140 aa6.34□□□□□ -1.39
PTCH1-225ENST00000551845 C14orf144Q96I85 54 aa6.34□□□□□ -1.39
PTCH1-225ENST00000551845 PAM16Q9Y3D7 125 aa6.34□□□□□ -1.39
PTCH1-225ENST00000551845 LRP2P98164 4655 aa6.33□□□□□ -1.4
PTCH1-225ENST00000551845 A6NDN8 102 aa6.33□□□□□ -1.4
PTCH1-225ENST00000551845 TRAV13-2A0A0B4J235 113 aa6.32□□□□□ -1.4
PTCH1-225ENST00000551845 HIST1H4GQ99525 98 aa6.32□□□□□ -1.4
PTCH1-225ENST00000551845 ANAPC11Q9NYG5 84 aa6.32□□□□□ -1.4
PTCH1-225ENST00000551845 ZNF706Q9Y5V0 76 aaPredicted RBP6.32□□□□□ -1.4
PTCH1-225ENST00000551845 TNXBP22105 4242 aa6.32□□□□□ -1.4
PTCH1-225ENST00000551845 FAM229BQ4G0N7 80 aa6.31□□□□□ -1.4
PTCH1-225ENST00000551845 PYY3Q5JQD4 70 aa6.31□□□□□ -1.4
PTCH1-225ENST00000551845 SLC25A34Q6PIV7 304 aa6.31□□□□□ -1.4
PTCH1-225ENST00000551845 Q6ZRX8 168 aa6.31□□□□□ -1.4
PTCH1-225ENST00000551845 TYMSOSQ8TAI1 123 aa6.3□□□□□ -1.4
PTCH1-225ENST00000551845 A0A087X002 238 aa6.29□□□□□ -1.4
PTCH1-225ENST00000551845 A4D1N5 150 aa6.29□□□□□ -1.4
PTCH1-225ENST00000551845 SPRR4Q96PI1 79 aa6.29□□□□□ -1.4
PTCH1-225ENST00000551845 HIGD1BQ9P298 99 aa6.29□□□□□ -1.4
PTCH1-225ENST00000551845 COX7BP24311 80 aa6.28□□□□□ -1.4
PTCH1-225ENST00000551845 C6orf99Q4VX62 202 aa6.28□□□□□ -1.4
PTCH1-225ENST00000551845 Q9BRP9 147 aa6.28□□□□□ -1.4
PTCH1-225ENST00000551845 ERC2-IT1O76042 136 aa6.27□□□□□ -1.41
PTCH1-225ENST00000551845 GAGE2AQ6NT46 116 aa6.27□□□□□ -1.41
PTCH1-225ENST00000551845 DHRS4-AS1Q9P1J3 65 aa6.27□□□□□ -1.41
PTCH1-225ENST00000551845 TRBV7-6A0A0J9YX20 115 aa6.26□□□□□ -1.41
PTCH1-225ENST00000551845 ELOF1P60002 83 aaKnown RBP6.25□□□□□ -1.41
PTCH1-225ENST00000551845 VAMP3Q15836 100 aa6.25□□□□□ -1.41
PTCH1-225ENST00000551845 TAL2Q16559 108 aa6.25□□□□□ -1.41
PTCH1-225ENST00000551845 KRTAP13-2Q52LG2 175 aa6.25□□□□□ -1.41
PTCH1-225ENST00000551845 KRTAP9-2Q9BYQ4 174 aa6.25□□□□□ -1.41
PTCH1-225ENST00000551845 A0A1B0GWB2 263 aa6.24□□□□□ -1.41
PTCH1-225ENST00000551845 C2orf91Q6ZV80 131 aa6.24□□□□□ -1.41
PTCH1-225ENST00000551845 SMIM11BQ8TCY0 68 aa6.24□□□□□ -1.41
PTCH1-225ENST00000551845 H3BS24 57 aa6.23□□□□□ -1.41
PTCH1-225ENST00000551845 LINC00483Q53H64 154 aa6.23□□□□□ -1.41
PTCH1-225ENST00000551845 TSPAN13O95857 204 aa6.22□□□□□ -1.41
PTCH1-225ENST00000551845 CEND1Q8N111 149 aa6.22□□□□□ -1.41
PTCH1-225ENST00000551845 C3orf22Q8N5N4 141 aa6.22□□□□□ -1.41
PTCH1-225ENST00000551845 ST20-AS1Q8NBB2 130 aa6.22□□□□□ -1.41
PTCH1-225ENST00000551845 RAB37Q96AX2 223 aa6.22□□□□□ -1.41
PTCH1-225ENST00000551845 C12orf57Q99622 126 aa6.22□□□□□ -1.41
PTCH1-225ENST00000551845 SLC25A20O43772 301 aa6.21□□□□□ -1.42
PTCH1-225ENST00000551845 CFC1BP0CG36 223 aa6.21□□□□□ -1.42
PTCH1-225ENST00000551845 CFC1P0CG37 223 aa6.21□□□□□ -1.42
PTCH1-225ENST00000551845 LINC00304Q8N9R0 145 aa6.21□□□□□ -1.42
PTCH1-225ENST00000551845 NHP2Q9NX24 153 aaKnown RBP6.21□□□□□ -1.42
PTCH1-225ENST00000551845 UQCR10Q9UDW1 63 aa6.21□□□□□ -1.42
PTCH1-225ENST00000551845 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.2□□□□□ -1.42
PTCH1-225ENST00000551845 SPAG11AQ6PDA7 123 aa6.2□□□□□ -1.42
PTCH1-225ENST00000551845 SSBP3-AS1Q7Z2R9 100 aa6.2□□□□□ -1.42
PTCH1-225ENST00000551845 IGLV9-49A0A0B4J1Y8 123 aa6.19□□□□□ -1.42
PTCH1-225ENST00000551845 CTAG1AP78358 180 aa6.19□□□□□ -1.42
PTCH1-225ENST00000551845 BVES-AS1Q5T3Y7 98 aa6.19□□□□□ -1.42
PTCH1-225ENST00000551845 DEFB105AQ8NG35 78 aa6.19□□□□□ -1.42
PTCH1-225ENST00000551845 A0A0B4J2C4 111 aa6.18□□□□□ -1.42
PTCH1-225ENST00000551845 KRTAP9-6A0A140TA67 174 aa6.18□□□□□ -1.42
PTCH1-225ENST00000551845 TEX49A0A1B0GTD5 131 aa6.18□□□□□ -1.42
PTCH1-225ENST00000551845 H7C2G1 150 aa6.18□□□□□ -1.42
PTCH1-225ENST00000551845 SPRR1BP22528 89 aa6.18□□□□□ -1.42
PTCH1-225ENST00000551845 HSD52Q0P140 79 aa6.18□□□□□ -1.42
PTCH1-225ENST00000551845 LAMTOR3Q9UHA4 124 aa6.18□□□□□ -1.42
PTCH1-225ENST00000551845 LINC00575Q6W349 94 aa6.17□□□□□ -1.42
PTCH1-225ENST00000551845 Q8NBF4 154 aa6.17□□□□□ -1.42
PTCH1-225ENST00000551845 PRO1854Q9UHT4 67 aa6.17□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms