RNA–Protein interactions for RNA: ENST00000551752.5

RBFOX1-213, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 1 (best)

Gene RBFOX1, Length 974 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-213ENST00000551752 SNCGO76070 127 aa5.34□□□□□ -1.55
RBFOX1-213ENST00000551752 CRPP02741 224 aa5.34□□□□□ -1.55
RBFOX1-213ENST00000551752 CHCHD5Q9BSY4 110 aa5.34□□□□□ -1.55
RBFOX1-213ENST00000551752 A0A087WYN8 130 aa5.33□□□□□ -1.56
RBFOX1-213ENST00000551752 TRACP01848 142 aa5.33□□□□□ -1.56
RBFOX1-213ENST00000551752 ANGP03950 147 aaKnown RBP5.33□□□□□ -1.56
RBFOX1-213ENST00000551752 SOSTDC1Q6X4U4 206 aa5.33□□□□□ -1.56
RBFOX1-213ENST00000551752 DAND5Q8N907 189 aa5.33□□□□□ -1.56
RBFOX1-213ENST00000551752 COX7B2Q8TF08 81 aa5.33□□□□□ -1.56
RBFOX1-213ENST00000551752 TRAV13-2A0A0B4J235 113 aa5.32□□□□□ -1.56
RBFOX1-213ENST00000551752 TEX49A0A1B0GTD5 131 aa5.32□□□□□ -1.56
RBFOX1-213ENST00000551752 GAGE2BQ13066 116 aa5.32□□□□□ -1.56
RBFOX1-213ENST00000551752 GAGE2EQ4V326 116 aa5.32□□□□□ -1.56
RBFOX1-213ENST00000551752 GAGE2DQ9UEU5 116 aa5.32□□□□□ -1.56
RBFOX1-213ENST00000551752 ACYP1P07311 99 aa5.31□□□□□ -1.56
RBFOX1-213ENST00000551752 KRTAP26-1Q6PEX3 210 aa5.31□□□□□ -1.56
RBFOX1-213ENST00000551752 ANAPC13Q9BS18 74 aa5.31□□□□□ -1.56
RBFOX1-213ENST00000551752 A0A0U1RRA0 63 aa5.3□□□□□ -1.56
RBFOX1-213ENST00000551752 REG3AQ06141 175 aa5.3□□□□□ -1.56
RBFOX1-213ENST00000551752 GAGE6Q13070 117 aa5.3□□□□□ -1.56
RBFOX1-213ENST00000551752 Q5VSD8 79 aa5.3□□□□□ -1.56
RBFOX1-213ENST00000551752 LINC00269Q8N2A0 174 aa5.3□□□□□ -1.56
RBFOX1-213ENST00000551752 C9orf163Q8N9P6 203 aa5.3□□□□□ -1.56
RBFOX1-213ENST00000551752 INAFM2P0DMQ5 153 aa5.29□□□□□ -1.56
RBFOX1-213ENST00000551752 RPL28P46779 137 aaKnown RBP5.29□□□□□ -1.56
RBFOX1-213ENST00000551752 CNBPP62633 177 aaKnown RBP5.29□□□□□ -1.56
RBFOX1-213ENST00000551752 SMIM29Q86T20 159 aa5.29□□□□□ -1.56
RBFOX1-213ENST00000551752 LINC01561Q8N1V8 128 aa5.29□□□□□ -1.56
RBFOX1-213ENST00000551752 A0A087WZ39 114 aa5.28□□□□□ -1.56
RBFOX1-213ENST00000551752 FUSP35637 526 aaKnown RBP eCLIP5.28□□□□□ -1.56
RBFOX1-213ENST00000551752 NDUFV3P56181 108 aaKnown RBP5.28□□□□□ -1.56
RBFOX1-213ENST00000551752 CFAP161Q6P656 301 aa5.28□□□□□ -1.56
RBFOX1-213ENST00000551752 SND1-IT1Q9HBX3 110 aa5.28□□□□□ -1.56
RBFOX1-213ENST00000551752 ABCA13Q86UQ4 5058 aa5.28□□□□□ -1.56
RBFOX1-213ENST00000551752 SRRM2Q9UQ35 2752 aaKnown RBP5.27□□□□□ -1.57
RBFOX1-213ENST00000551752 IGLV4-60A0A075B6I1 120 aa5.27□□□□□ -1.57
RBFOX1-213ENST00000551752 IGLV2-33A0A075B6J2 118 aaPredicted RBP5.27□□□□□ -1.57
RBFOX1-213ENST00000551752 IGHV3OR16-9A0A0B4J2B5 98 aa5.27□□□□□ -1.57
RBFOX1-213ENST00000551752 TRBV7-7A0A0K0K1E9 115 aa5.27□□□□□ -1.57
RBFOX1-213ENST00000551752 LECT2O14960 151 aa5.27□□□□□ -1.57
RBFOX1-213ENST00000551752 BAALC-AS2P0C853 105 aa5.27□□□□□ -1.57
RBFOX1-213ENST00000551752 LINC00158P58513 81 aa5.27□□□□□ -1.57
RBFOX1-213ENST00000551752 MIR7-3HGQ8N6C7 128 aa5.27□□□□□ -1.57
RBFOX1-213ENST00000551752 TOMM7Q9P0U1 55 aa5.27□□□□□ -1.57
RBFOX1-213ENST00000551752 DMBT1Q9UGM3 2413 aaPredicted RBP5.27□□□□□ -1.57
RBFOX1-213ENST00000551752 VPS13BQ7Z7G8 4022 aa5.26□□□□□ -1.57
RBFOX1-213ENST00000551752 IGKV3OR2-268A0A0C4DH90 116 aa5.26□□□□□ -1.57
RBFOX1-213ENST00000551752 LINC00959A0A1B0GUT2 108 aa5.26□□□□□ -1.57
RBFOX1-213ENST00000551752 H0YGX0 51 aa5.26□□□□□ -1.57
RBFOX1-213ENST00000551752 SS18Q15532 418 aa5.26□□□□□ -1.57
RBFOX1-213ENST00000551752 SMR3BP02814 79 aaPredicted RBP5.25□□□□□ -1.57
RBFOX1-213ENST00000551752 SDIM1Q6ZPB5 146 aa5.25□□□□□ -1.57
RBFOX1-213ENST00000551752 LINC00337Q8N6G1 96 aa5.25□□□□□ -1.57
RBFOX1-213ENST00000551752 IMUPQ9GZP8 106 aa5.25□□□□□ -1.57
RBFOX1-213ENST00000551752 PKIGQ9Y2B9 76 aa5.25□□□□□ -1.57
RBFOX1-213ENST00000551752 FLG2Q5D862 2391 aaPredicted RBP5.24□□□□□ -1.57
RBFOX1-213ENST00000551752 DNAH8Q96JB1 4490 aa5.24□□□□□ -1.57
RBFOX1-213ENST00000551752 IGKV2-28A0A075B6P5 120 aa5.24□□□□□ -1.57
RBFOX1-213ENST00000551752 IGKV2D-28P01615 120 aa5.24□□□□□ -1.57
RBFOX1-213ENST00000551752 SCXQ7RTU7 201 aa5.24□□□□□ -1.57
RBFOX1-213ENST00000551752 LINC00643Q86TS7 51 aa5.24□□□□□ -1.57
RBFOX1-213ENST00000551752 Q8IZM0 81 aa5.24□□□□□ -1.57
RBFOX1-213ENST00000551752 CIRBP-AS1Q8TBR5 109 aa5.24□□□□□ -1.57
RBFOX1-213ENST00000551752 FAM218AQ96MZ4 157 aa5.24□□□□□ -1.57
RBFOX1-213ENST00000551752 DNAL4O96015 105 aa5.23□□□□□ -1.57
RBFOX1-213ENST00000551752 C5orf38Q86SI9 138 aa5.23□□□□□ -1.57
RBFOX1-213ENST00000551752 SMIM11BQ8TCY0 68 aa5.23□□□□□ -1.57
RBFOX1-213ENST00000551752 FAT1Q14517 4588 aa5.22□□□□□ -1.57
RBFOX1-213ENST00000551752 IGLV10-54A0A075B6I4 117 aa5.22□□□□□ -1.57
RBFOX1-213ENST00000551752 GVQW2A0A096LPI5 108 aaPredicted RBP5.22□□□□□ -1.57
RBFOX1-213ENST00000551752 CXCL5P42830 114 aa5.22□□□□□ -1.57
RBFOX1-213ENST00000551752 C6orf226Q5I0X4 101 aa5.22□□□□□ -1.57
RBFOX1-213ENST00000551752 CHCHD10Q8WYQ3 142 aaPredicted RBP5.22□□□□□ -1.57
RBFOX1-213ENST00000551752 C22orf24Q9Y442 160 aa5.22□□□□□ -1.57
RBFOX1-213ENST00000551752 A0A1B0GX51 115 aa5.21□□□□□ -1.58
RBFOX1-213ENST00000551752 OXTP01178 125 aa5.21□□□□□ -1.58
RBFOX1-213ENST00000551752 PFN2P35080 140 aa5.21□□□□□ -1.58
RBFOX1-213ENST00000551752 KRTAP10-6P60371 365 aaPredicted RBP5.21□□□□□ -1.58
RBFOX1-213ENST00000551752 KRTAP10-4P60372 401 aaPredicted RBP5.21□□□□□ -1.58
RBFOX1-213ENST00000551752 CLPSL2Q6UWE3 100 aa5.21□□□□□ -1.58
RBFOX1-213ENST00000551752 CD164L2Q6UWJ8 174 aa5.21□□□□□ -1.58
RBFOX1-213ENST00000551752 C15orf56Q8N910 161 aa5.21□□□□□ -1.58
RBFOX1-213ENST00000551752 F8WDY8 70 aa5.2□□□□□ -1.58
RBFOX1-213ENST00000551752 NDUFC2O95298 119 aa5.2□□□□□ -1.58
RBFOX1-213ENST00000551752 XCL1P47992 114 aa5.2□□□□□ -1.58
RBFOX1-213ENST00000551752 COX17Q14061 63 aa5.2□□□□□ -1.58
RBFOX1-213ENST00000551752 OR13C6PQ8NH95 151 aa5.2□□□□□ -1.58
RBFOX1-213ENST00000551752 OBSCN-AS1Q96MR7 158 aa5.2□□□□□ -1.58
RBFOX1-213ENST00000551752 LINC00474Q9P2X8 69 aa5.2□□□□□ -1.58
RBFOX1-213ENST00000551752 CCDC179H3BU77 68 aa5.19□□□□□ -1.58
RBFOX1-213ENST00000551752 GAGE2AQ6NT46 116 aa5.19□□□□□ -1.58
RBFOX1-213ENST00000551752 SMCR5Q8TEV8 140 aa5.19□□□□□ -1.58
RBFOX1-213ENST00000551752 LINC00167Q96N53 147 aa5.19□□□□□ -1.58
RBFOX1-213ENST00000551752 PLAC8Q9NZF1 115 aa5.19□□□□□ -1.58
RBFOX1-213ENST00000551752 HAMPP81172 84 aa5.18□□□□□ -1.58
RBFOX1-213ENST00000551752 Q6JHZ5 121 aa5.18□□□□□ -1.58
RBFOX1-213ENST00000551752 SPACA4Q8TDM5 124 aa5.18□□□□□ -1.58
RBFOX1-213ENST00000551752 ORMDL1Q9P0S3 153 aa5.18□□□□□ -1.58
RBFOX1-213ENST00000551752 FAM236AA0A1B0GUQ0 79 aa5.17□□□□□ -1.58
RBFOX1-213ENST00000551752 FAM236BA0A1B0GV22 79 aa5.17□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms