RNA–Protein interactions for RNA: ENST00000551269.1

PRPF40B-213, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 3

Gene PRPF40B, Length 923 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-213ENST00000551269 IGLV7-43P04211 117 aa7.22□□□□□ -1.25
PRPF40B-213ENST00000551269 HINT1P49773 126 aaPredicted RBP7.22□□□□□ -1.25
PRPF40B-213ENST00000551269 CTAG1AP78358 180 aa7.22□□□□□ -1.25
PRPF40B-213ENST00000551269 DIRC1Q969H9 104 aa7.22□□□□□ -1.25
PRPF40B-213ENST00000551269 ZNF73O43830 326 aaPredicted RBP7.21□□□□□ -1.26
PRPF40B-213ENST00000551269 RPL28P46779 137 aaKnown RBP7.21□□□□□ -1.26
PRPF40B-213ENST00000551269 NHP2Q9NX24 153 aaKnown RBP7.21□□□□□ -1.26
PRPF40B-213ENST00000551269 CFC1BP0CG36 223 aa7.2□□□□□ -1.26
PRPF40B-213ENST00000551269 CFC1P0CG37 223 aa7.2□□□□□ -1.26
PRPF40B-213ENST00000551269 PRLHP81277 87 aa7.2□□□□□ -1.26
PRPF40B-213ENST00000551269 Q1RN00 199 aa7.2□□□□□ -1.26
PRPF40B-213ENST00000551269 PKHD1L1Q86WI1 4243 aa7.19□□□□□ -1.26
PRPF40B-213ENST00000551269 H7C2G1 150 aa7.19□□□□□ -1.26
PRPF40B-213ENST00000551269 SPRR1AP35321 89 aa7.19□□□□□ -1.26
PRPF40B-213ENST00000551269 FAT1Q14517 4588 aa7.19□□□□□ -1.26
PRPF40B-213ENST00000551269 KRTAP10-4P60372 401 aaPredicted RBP7.18□□□□□ -1.26
PRPF40B-213ENST00000551269 C6orf99Q4VX62 202 aa7.18□□□□□ -1.26
PRPF40B-213ENST00000551269 BVES-AS1Q5T3Y7 98 aa7.18□□□□□ -1.26
PRPF40B-213ENST00000551269 ZNF861PO60384 105 aa7.17□□□□□ -1.26
PRPF40B-213ENST00000551269 SPINK6Q6UWN8 80 aa7.17□□□□□ -1.26
PRPF40B-213ENST00000551269 SMIM11BQ8TCY0 68 aa7.17□□□□□ -1.26
PRPF40B-213ENST00000551269 HIGD2AQ9BW72 106 aa7.17□□□□□ -1.26
PRPF40B-213ENST00000551269 PRO1854Q9UHT4 67 aa7.17□□□□□ -1.26
PRPF40B-213ENST00000551269 HERC2O95714 4834 aa7.16□□□□□ -1.26
PRPF40B-213ENST00000551269 K7ERJ3 54 aa7.16□□□□□ -1.26
PRPF40B-213ENST00000551269 COX7BP24311 80 aa7.16□□□□□ -1.26
PRPF40B-213ENST00000551269 Q6ZRX8 168 aa7.16□□□□□ -1.26
PRPF40B-213ENST00000551269 A0A1B0GWB2 263 aa7.15□□□□□ -1.26
PRPF40B-213ENST00000551269 B5MCH6 92 aa7.15□□□□□ -1.26
PRPF40B-213ENST00000551269 KRTAP4-16G5E9R7 235 aaPredicted RBP7.15□□□□□ -1.26
PRPF40B-213ENST00000551269 H0Y9J4 135 aa7.15□□□□□ -1.26
PRPF40B-213ENST00000551269 VAMP3Q15836 100 aa7.15□□□□□ -1.26
PRPF40B-213ENST00000551269 BATFQ16520 125 aa7.15□□□□□ -1.26
PRPF40B-213ENST00000551269 KRTAP17-1Q9BYP8 105 aa7.15□□□□□ -1.26
PRPF40B-213ENST00000551269 INAFM2P0DMQ5 153 aa7.14□□□□□ -1.27
PRPF40B-213ENST00000551269 ELOF1P60002 83 aaKnown RBP7.14□□□□□ -1.27
PRPF40B-213ENST00000551269 KRTAP13-1Q8IUC0 172 aa7.14□□□□□ -1.27
PRPF40B-213ENST00000551269 TRBV7-6A0A0J9YX20 115 aa7.13□□□□□ -1.27
PRPF40B-213ENST00000551269 SRRM2Q9UQ35 2752 aaKnown RBP7.13□□□□□ -1.27
PRPF40B-213ENST00000551269 PSMB2P49721 201 aa7.12□□□□□ -1.27
PRPF40B-213ENST00000551269 KRTAP4-5Q9BYR2 181 aa7.12□□□□□ -1.27
PRPF40B-213ENST00000551269 DHRS4-AS1Q9P1J3 65 aa7.12□□□□□ -1.27
PRPF40B-213ENST00000551269 ZNF706Q9Y5V0 76 aaPredicted RBP7.12□□□□□ -1.27
PRPF40B-213ENST00000551269 PCP4L1A6NKN8 68 aa7.11□□□□□ -1.27
PRPF40B-213ENST00000551269 SLC25A20O43772 301 aa7.11□□□□□ -1.27
PRPF40B-213ENST00000551269 TSPAN13O95857 204 aa7.1□□□□□ -1.27
PRPF40B-213ENST00000551269 SMCR5Q8TEV8 140 aa7.1□□□□□ -1.27
PRPF40B-213ENST00000551269 Q9BRP9 147 aa7.1□□□□□ -1.27
PRPF40B-213ENST00000551269 COX6CP09669 75 aa7.09□□□□□ -1.27
PRPF40B-213ENST00000551269 TRIAP1O43715 76 aa7.08□□□□□ -1.28
PRPF40B-213ENST00000551269 H0YGX0 51 aa7.07□□□□□ -1.28
PRPF40B-213ENST00000551269 SNCGO76070 127 aa7.07□□□□□ -1.28
PRPF40B-213ENST00000551269 hADV29S1A0JD25 119 aa7.05□□□□□ -1.28
PRPF40B-213ENST00000551269 ERC2-IT1O76042 136 aa7.05□□□□□ -1.28
PRPF40B-213ENST00000551269 LYRM7Q5U5X0 104 aa7.05□□□□□ -1.28
PRPF40B-213ENST00000551269 LINC00575Q6W349 94 aa7.05□□□□□ -1.28
PRPF40B-213ENST00000551269 SPRR4Q96PI1 79 aa7.05□□□□□ -1.28
PRPF40B-213ENST00000551269 FLG2Q5D862 2391 aaPredicted RBP7.05□□□□□ -1.28
PRPF40B-213ENST00000551269 SCGB1C2P0DMR2 95 aa7.04□□□□□ -1.28
PRPF40B-213ENST00000551269 DNAL4O96015 105 aa7.03□□□□□ -1.28
PRPF40B-213ENST00000551269 GAGE2AQ6NT46 116 aa7.03□□□□□ -1.28
PRPF40B-213ENST00000551269 SNHG12Q9BXW3 62 aa7.03□□□□□ -1.28
PRPF40B-213ENST00000551269 A0A1B0GX51 115 aa7.02□□□□□ -1.29
PRPF40B-213ENST00000551269 KRTAP1-4P0C5Y4 121 aa7.02□□□□□ -1.29
PRPF40B-213ENST00000551269 ST20-AS1Q8NBB2 130 aa7.02□□□□□ -1.29
PRPF40B-213ENST00000551269 CLEC2BQ92478 149 aa7.02□□□□□ -1.29
PRPF40B-213ENST00000551269 NAA38Q9BRA0 125 aaKnown RBP7.02□□□□□ -1.29
PRPF40B-213ENST00000551269 ABCA13Q86UQ4 5058 aa7.01□□□□□ -1.29
PRPF40B-213ENST00000551269 OXTP01178 125 aa7.01□□□□□ -1.29
PRPF40B-213ENST00000551269 FAM229BQ4G0N7 80 aa7.01□□□□□ -1.29
PRPF40B-213ENST00000551269 COL5A1-AS1Q5SY13 56 aa7.01□□□□□ -1.29
PRPF40B-213ENST00000551269 Q6ZQY7 126 aa7.01□□□□□ -1.29
PRPF40B-213ENST00000551269 DEFB105AQ8NG35 78 aa7.01□□□□□ -1.29
PRPF40B-213ENST00000551269 CRYGAP11844 174 aa7□□□□□ -1.29
PRPF40B-213ENST00000551269 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP7□□□□□ -1.29
PRPF40B-213ENST00000551269 FAM218AQ96MZ4 157 aa7□□□□□ -1.29
PRPF40B-213ENST00000551269 TEX49A0A1B0GTD5 131 aa6.99□□□□□ -1.29
PRPF40B-213ENST00000551269 H3BUT2 72 aa6.99□□□□□ -1.29
PRPF40B-213ENST00000551269 LINC00483Q53H64 154 aa6.99□□□□□ -1.29
PRPF40B-213ENST00000551269 LINC01600Q96MT4 127 aa6.99□□□□□ -1.29
PRPF40B-213ENST00000551269 ANAPC11Q9NYG5 84 aa6.99□□□□□ -1.29
PRPF40B-213ENST00000551269 C9orf118A6NHY6 69 aa6.98□□□□□ -1.29
PRPF40B-213ENST00000551269 KRTAP29-1A8MX34 341 aaPredicted RBP6.98□□□□□ -1.29
PRPF40B-213ENST00000551269 J3QL48 77 aa6.98□□□□□ -1.29
PRPF40B-213ENST00000551269 TAX1BP3O14907 124 aa6.98□□□□□ -1.29
PRPF40B-213ENST00000551269 GHRHP01286 108 aa6.98□□□□□ -1.29
PRPF40B-213ENST00000551269 PRR26Q8N8Z3 221 aa6.98□□□□□ -1.29
PRPF40B-213ENST00000551269 FAT3Q8TDW7 4589 aa6.97□□□□□ -1.29
PRPF40B-213ENST00000551269 IGLV5-48A0A075B6I7 105 aa6.97□□□□□ -1.29
PRPF40B-213ENST00000551269 A0A087X002 238 aa6.97□□□□□ -1.29
PRPF40B-213ENST00000551269 ATXN8Q156A1 80 aa6.97□□□□□ -1.29
PRPF40B-213ENST00000551269 OCIAD2Q56VL3 154 aa6.97□□□□□ -1.29
PRPF40B-213ENST00000551269 C9orf153Q5TBE3 101 aa6.97□□□□□ -1.29
PRPF40B-213ENST00000551269 TYMSOSQ8TAI1 123 aa6.97□□□□□ -1.29
PRPF40B-213ENST00000551269 LAMTOR3Q9UHA4 124 aa6.97□□□□□ -1.29
PRPF40B-213ENST00000551269 MYCBP2O75592 4640 aa6.97□□□□□ -1.29
PRPF40B-213ENST00000551269 IGLV9-49A0A0B4J1Y8 123 aa6.96□□□□□ -1.3
PRPF40B-213ENST00000551269 F8WEM9 126 aa6.96□□□□□ -1.3
PRPF40B-213ENST00000551269 LST1O00453 97 aa6.96□□□□□ -1.3
PRPF40B-213ENST00000551269 SPRR1BP22528 89 aa6.96□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms