RNA–Protein interactions for RNA: ENST00000550818.1

TSPAN8-205, Transcript of tetraspanin 8, humanhuman

TSL 1 (best)

Gene TSPAN8, Length 627 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN8-205ENST00000550818 ATP7AQ04656 1500 aa0.94□□□□□ -2.26
TSPAN8-205ENST00000550818 CPSF4LA6NMK7 179 aaKnown RBP0.93□□□□□ -2.26
TSPAN8-205ENST00000550818 NDUFA4O00483 81 aa0.93□□□□□ -2.26
TSPAN8-205ENST00000550818 PRH1P02810 166 aa0.93□□□□□ -2.26
TSPAN8-205ENST00000550818 PLNP26678 52 aa0.93□□□□□ -2.26
TSPAN8-205ENST00000550818 RPL37P61927 97 aaKnown RBP0.93□□□□□ -2.26
TSPAN8-205ENST00000550818 PRB3Q04118 309 aaPredicted RBP0.93□□□□□ -2.26
TSPAN8-205ENST00000550818 KRTAP5-10Q6L8G5 202 aa0.93□□□□□ -2.26
TSPAN8-205ENST00000550818 ABRACLQ9P1F3 81 aa0.93□□□□□ -2.26
TSPAN8-205ENST00000550818 E9PCH4 1651 aa0.93□□□□□ -2.26
TSPAN8-205ENST00000550818 DDX60Q8IY21 1712 aaKnown RBP0.92□□□□□ -2.26
TSPAN8-205ENST00000550818 FAM208BQ5VWN6 2430 aa0.92□□□□□ -2.26
TSPAN8-205ENST00000550818 COX6B1P14854 86 aa0.92□□□□□ -2.26
TSPAN8-205ENST00000550818 SAMD9LQ8IVG5 1584 aa0.91□□□□□ -2.26
TSPAN8-205ENST00000550818 DEFB131BA0A096LNP1 70 aa0.91□□□□□ -2.26
TSPAN8-205ENST00000550818 FCER1GP30273 86 aa0.91□□□□□ -2.26
TSPAN8-205ENST00000550818 RPL38P63173 70 aaKnown RBP0.91□□□□□ -2.26
TSPAN8-205ENST00000550818 DOPEY2Q9Y3R5 2298 aa0.91□□□□□ -2.26
TSPAN8-205ENST00000550818 DEPDC5O75140 1603 aa0.9□□□□□ -2.26
TSPAN8-205ENST00000550818 C4AP0C0L4 1744 aa0.9□□□□□ -2.27
TSPAN8-205ENST00000550818 ETDCA0A1B0GVM5 59 aa0.9□□□□□ -2.27
TSPAN8-205ENST00000550818 I3L3M4 83 aa0.9□□□□□ -2.27
TSPAN8-205ENST00000550818 MRPL33O75394 65 aaKnown RBP0.9□□□□□ -2.27
TSPAN8-205ENST00000550818 CACNA1EQ15878 2313 aa0.9□□□□□ -2.27
TSPAN8-205ENST00000550818 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP0.9□□□□□ -2.27
TSPAN8-205ENST00000550818 IQGAP1P46940 1657 aa0.9□□□□□ -2.27
TSPAN8-205ENST00000550818 CNTRLQ7Z7A1 2325 aa0.89□□□□□ -2.27
TSPAN8-205ENST00000550818 JMJD1CQ15652 2540 aa0.89□□□□□ -2.27
TSPAN8-205ENST00000550818 H0YGX0 51 aa0.89□□□□□ -2.27
TSPAN8-205ENST00000550818 K7EIL1 84 aa0.89□□□□□ -2.27
TSPAN8-205ENST00000550818 HAMPP81172 84 aa0.89□□□□□ -2.27
TSPAN8-205ENST00000550818 TOGARAM1Q9Y4F4 1720 aa0.89□□□□□ -2.27
TSPAN8-205ENST00000550818 M0R1W7 72 aa0.88□□□□□ -2.27
TSPAN8-205ENST00000550818 COX6B2Q6YFQ2 88 aa0.88□□□□□ -2.27
TSPAN8-205ENST00000550818 SSBP3-AS1Q7Z2R9 100 aa0.88□□□□□ -2.27
TSPAN8-205ENST00000550818 DEFB123Q8N688 67 aa0.88□□□□□ -2.27
TSPAN8-205ENST00000550818 PTPRZ1P23471 2315 aaPredicted RBP0.87□□□□□ -2.27
TSPAN8-205ENST00000550818 PLCE1Q9P212 2302 aa0.87□□□□□ -2.27
TSPAN8-205ENST00000550818 SPTY2D1-AS1A0A0U1RR47 76 aa0.87□□□□□ -2.27
TSPAN8-205ENST00000550818 FXYD6P3P58550 94 aa0.87□□□□□ -2.27
TSPAN8-205ENST00000550818 SNRPGP62308 76 aaKnown RBP0.87□□□□□ -2.27
TSPAN8-205ENST00000550818 KIF21BO75037 1637 aa0.86□□□□□ -2.27
TSPAN8-205ENST00000550818 LYNX1G3V0Z9 82 aa0.86□□□□□ -2.27
TSPAN8-205ENST00000550818 UBE2DNLQ8IWF7 75 aa0.86□□□□□ -2.27
TSPAN8-205ENST00000550818 PIEZO2Q9H5I5 2752 aa0.86□□□□□ -2.27
TSPAN8-205ENST00000550818 DUOX1Q9NRD9 1551 aa0.86□□□□□ -2.27
TSPAN8-205ENST00000550818 ALMS1Q8TCU4 4167 aa0.85□□□□□ -2.27
TSPAN8-205ENST00000550818 I3L2K1 104 aa0.85□□□□□ -2.27
TSPAN8-205ENST00000550818 K7EQZ3 153 aa0.85□□□□□ -2.27
TSPAN8-205ENST00000550818 C4BP0C0L5 1744 aa0.85□□□□□ -2.27
TSPAN8-205ENST00000550818 CRIP1P50238 77 aa0.85□□□□□ -2.27
TSPAN8-205ENST00000550818 USMG5Q96IX5 58 aa0.85□□□□□ -2.27
TSPAN8-205ENST00000550818 CRIPTQ9P021 101 aa0.85□□□□□ -2.27
TSPAN8-205ENST00000550818 LMO7Q8WWI1 1683 aa0.84□□□□□ -2.27
TSPAN8-205ENST00000550818 TNRC6CQ9HCJ0 1690 aaKnown RBP0.84□□□□□ -2.27
TSPAN8-205ENST00000550818 CNFNQ9BYD5 112 aa0.84□□□□□ -2.27
TSPAN8-205ENST00000550818 ASH1LQ9NR48 2969 aaKnown RBP0.84□□□□□ -2.27
TSPAN8-205ENST00000550818 MROH2BQ7Z745 1585 aa0.83□□□□□ -2.28
TSPAN8-205ENST00000550818 PDE4DIPQ5VU43 2346 aa0.83□□□□□ -2.28
TSPAN8-205ENST00000550818 C2CD3Q4AC94 2353 aa0.83□□□□□ -2.28
TSPAN8-205ENST00000550818 CCL22O00626 93 aa0.83□□□□□ -2.28
TSPAN8-205ENST00000550818 Q8IZM0 81 aa0.83□□□□□ -2.28
TSPAN8-205ENST00000550818 TP53AIP1Q9HCN2 124 aa0.83□□□□□ -2.28
TSPAN8-205ENST00000550818 TMEM167BQ9NRX6 74 aa0.83□□□□□ -2.28
TSPAN8-205ENST00000550818 PTPRQQ9UMZ3 2332 aa0.83□□□□□ -2.28
TSPAN8-205ENST00000550818 MUC16Q8WXI7 14507 aa0.83□□□□□ -2.28
TSPAN8-205ENST00000550818 PKDREJQ9NTG1 2253 aa0.82□□□□□ -2.28
TSPAN8-205ENST00000550818 LINC00158P58513 81 aa0.82□□□□□ -2.28
TSPAN8-205ENST00000550818 PIGYQ3MUY2 71 aa0.82□□□□□ -2.28
TSPAN8-205ENST00000550818 MRPL34Q9BQ48 92 aaKnown RBP0.82□□□□□ -2.28
TSPAN8-205ENST00000550818 CDKN2A-AS1Q9UH64 79 aa0.82□□□□□ -2.28
TSPAN8-205ENST00000550818 GCC2Q8IWJ2 1684 aa0.81□□□□□ -2.28
TSPAN8-205ENST00000550818 COX6A2Q02221 97 aa0.81□□□□□ -2.28
TSPAN8-205ENST00000550818 USF3Q68DE3 2245 aa0.81□□□□□ -2.28
TSPAN8-205ENST00000550818 NOTCH1P46531 2555 aa0.81□□□□□ -2.28
TSPAN8-205ENST00000550818 WNK2Q9Y3S1 2297 aa0.8□□□□□ -2.28
TSPAN8-205ENST00000550818 CLTCL1P53675 1640 aa0.8□□□□□ -2.28
TSPAN8-205ENST00000550818 NDUFA3O95167 84 aa0.8□□□□□ -2.28
TSPAN8-205ENST00000550818 C10orf95Q9H7T3 257 aa0.8□□□□□ -2.28
TSPAN8-205ENST00000550818 SPTBN2O15020 2390 aa0.79□□□□□ -2.28
TSPAN8-205ENST00000550818 TPRP12270 2363 aaKnown RBP0.79□□□□□ -2.28
TSPAN8-205ENST00000550818 SPINK4O60575 86 aa0.79□□□□□ -2.28
TSPAN8-205ENST00000550818 SPINK9Q5DT21 86 aa0.79□□□□□ -2.28
TSPAN8-205ENST00000550818 Q5VSD8 79 aa0.79□□□□□ -2.28
TSPAN8-205ENST00000550818 PRO3102Q9H379 93 aa0.79□□□□□ -2.28
TSPAN8-205ENST00000550818 FBN2P35556 2912 aa0.79□□□□□ -2.28
TSPAN8-205ENST00000550818 H0YAA0 97 aa0.78□□□□□ -2.28
TSPAN8-205ENST00000550818 LINC00308Q8TCZ7 52 aa0.78□□□□□ -2.28
TSPAN8-205ENST00000550818 SMIM2Q9BVW6 85 aa0.78□□□□□ -2.28
TSPAN8-205ENST00000550818 ZNF462Q96JM2 2506 aa0.78□□□□□ -2.28
TSPAN8-205ENST00000550818 REV3LO60673 3130 aa0.78□□□□□ -2.29
TSPAN8-205ENST00000550818 MEGF8Q7Z7M0 2845 aa0.77□□□□□ -2.29
TSPAN8-205ENST00000550818 KNL1Q8NG31 2342 aa0.77□□□□□ -2.29
TSPAN8-205ENST00000550818 CACNA1HO95180 2353 aa0.77□□□□□ -2.29
TSPAN8-205ENST00000550818 SPTBN1Q01082 2364 aaKnown RBP0.77□□□□□ -2.29
TSPAN8-205ENST00000550818 NDUFA1O15239 70 aa0.76□□□□□ -2.29
TSPAN8-205ENST00000550818 SPRR1AP35321 89 aa0.76□□□□□ -2.29
TSPAN8-205ENST00000550818 IGF2RP11717 2491 aa0.75□□□□□ -2.29
TSPAN8-205ENST00000550818 TIMM8BQ9Y5J9 83 aaPredicted RBP0.75□□□□□ -2.29
TSPAN8-205ENST00000550818 GVINP1Q7Z2Y8 2422 aa0.74□□□□□ -2.29
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms