RNA–Protein interactions for RNA: ENST00000550406.1

RAB5C-206, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB5C, Length 500 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-206ENST00000550406 C12orf57Q99622 126 aa7.9□□□□□ -1.14
RAB5C-206ENST00000550406 LRP1Q07954 4544 aaKnown RBP7.89□□□□□ -1.15
RAB5C-206ENST00000550406 FLG2Q5D862 2391 aaPredicted RBP7.89□□□□□ -1.15
RAB5C-206ENST00000550406 PRLHP81277 87 aa7.89□□□□□ -1.15
RAB5C-206ENST00000550406 CEND1Q8N111 149 aa7.89□□□□□ -1.15
RAB5C-206ENST00000550406 TRAV23DV6A0A075B6W5 121 aa7.88□□□□□ -1.15
RAB5C-206ENST00000550406 A6NDN8 102 aa7.87□□□□□ -1.15
RAB5C-206ENST00000550406 B5MCH6 92 aa7.87□□□□□ -1.15
RAB5C-206ENST00000550406 H0Y9J4 135 aa7.87□□□□□ -1.15
RAB5C-206ENST00000550406 UBE2AP49459 152 aa7.87□□□□□ -1.15
RAB5C-206ENST00000550406 FXYD2P54710 66 aa7.87□□□□□ -1.15
RAB5C-206ENST00000550406 TRAV13-2A0A0B4J235 113 aa7.86□□□□□ -1.15
RAB5C-206ENST00000550406 ZNF73O43830 326 aaPredicted RBP7.86□□□□□ -1.15
RAB5C-206ENST00000550406 CFC1BP0CG36 223 aa7.86□□□□□ -1.15
RAB5C-206ENST00000550406 CFC1P0CG37 223 aa7.86□□□□□ -1.15
RAB5C-206ENST00000550406 RPL28P46779 137 aaKnown RBP7.86□□□□□ -1.15
RAB5C-206ENST00000550406 DIRC1Q969H9 104 aa7.86□□□□□ -1.15
RAB5C-206ENST00000550406 ETDCA0A1B0GVM5 59 aa7.85□□□□□ -1.15
RAB5C-206ENST00000550406 HSD52Q0P140 79 aa7.85□□□□□ -1.15
RAB5C-206ENST00000550406 SMIM11BQ8TCY0 68 aa7.84□□□□□ -1.15
RAB5C-206ENST00000550406 SMCR5Q8TEV8 140 aa7.84□□□□□ -1.15
RAB5C-206ENST00000550406 Q9BRP9 147 aa7.84□□□□□ -1.15
RAB5C-206ENST00000550406 MYCBP2O75592 4640 aa7.83□□□□□ -1.16
RAB5C-206ENST00000550406 KRTAP1-4P0C5Y4 121 aa7.83□□□□□ -1.16
RAB5C-206ENST00000550406 Q6ZRX8 168 aa7.83□□□□□ -1.16
RAB5C-206ENST00000550406 ERC2-IT1O76042 136 aa7.82□□□□□ -1.16
RAB5C-206ENST00000550406 RPL13AP40429 203 aaKnown RBP7.82□□□□□ -1.16
RAB5C-206ENST00000550406 C6orf99Q4VX62 202 aa7.82□□□□□ -1.16
RAB5C-206ENST00000550406 CBY1Q9Y3M2 126 aa7.82□□□□□ -1.16
RAB5C-206ENST00000550406 A0A0B4J2C4 111 aa7.81□□□□□ -1.16
RAB5C-206ENST00000550406 KRTAP29-1A8MX34 341 aaPredicted RBP7.81□□□□□ -1.16
RAB5C-206ENST00000550406 HIGD2AQ9BW72 106 aa7.81□□□□□ -1.16
RAB5C-206ENST00000550406 OXTP01178 125 aa7.8□□□□□ -1.16
RAB5C-206ENST00000550406 CTAG1AP78358 180 aa7.8□□□□□ -1.16
RAB5C-206ENST00000550406 BVES-AS1Q5T3Y7 98 aa7.8□□□□□ -1.16
RAB5C-206ENST00000550406 LINC01600Q96MT4 127 aa7.8□□□□□ -1.16
RAB5C-206ENST00000550406 TRBV7-6A0A0J9YX20 115 aa7.79□□□□□ -1.16
RAB5C-206ENST00000550406 MT1HL1P0DM35 61 aa7.79□□□□□ -1.16
RAB5C-206ENST00000550406 ELOF1P60002 83 aaKnown RBP7.79□□□□□ -1.16
RAB5C-206ENST00000550406 TNXBP22105 4242 aa7.79□□□□□ -1.16
RAB5C-206ENST00000550406 TMEM238LA0A1B0GVL6 79 aa7.78□□□□□ -1.16
RAB5C-206ENST00000550406 A0A1B0GWB2 263 aa7.78□□□□□ -1.16
RAB5C-206ENST00000550406 A6NJY4 79 aa7.78□□□□□ -1.16
RAB5C-206ENST00000550406 TSTD3H0UI37 97 aa7.78□□□□□ -1.16
RAB5C-206ENST00000550406 COX7BP24311 80 aa7.78□□□□□ -1.16
RAB5C-206ENST00000550406 RAB37Q96AX2 223 aa7.78□□□□□ -1.16
RAB5C-206ENST00000550406 NHP2Q9NX24 153 aaKnown RBP7.78□□□□□ -1.16
RAB5C-206ENST00000550406 ANAPC11Q9NYG5 84 aa7.78□□□□□ -1.16
RAB5C-206ENST00000550406 HINT1P49773 126 aaPredicted RBP7.77□□□□□ -1.17
RAB5C-206ENST00000550406 KRTAP10-8P60410 259 aa7.77□□□□□ -1.17
RAB5C-206ENST00000550406 PRO1854Q9UHT4 67 aa7.77□□□□□ -1.17
RAB5C-206ENST00000550406 H7C2G1 150 aa7.76□□□□□ -1.17
RAB5C-206ENST00000550406 K7ERJ3 54 aa7.76□□□□□ -1.17
RAB5C-206ENST00000550406 SPRR4Q96PI1 79 aa7.76□□□□□ -1.17
RAB5C-206ENST00000550406 PRR26Q8N8Z3 221 aa7.75□□□□□ -1.17
RAB5C-206ENST00000550406 A0A087X002 238 aa7.74□□□□□ -1.17
RAB5C-206ENST00000550406 ST20-AS1Q8NBB2 130 aa7.74□□□□□ -1.17
RAB5C-206ENST00000550406 DHRS4-AS1Q9P1J3 65 aa7.73□□□□□ -1.17
RAB5C-206ENST00000550406 KRTAP13-2Q52LG2 175 aa7.72□□□□□ -1.17
RAB5C-206ENST00000550406 LINC00575Q6W349 94 aa7.72□□□□□ -1.17
RAB5C-206ENST00000550406 UBR4Q5T4S7 5183 aa7.72□□□□□ -1.17
RAB5C-206ENST00000550406 VAMP3Q15836 100 aa7.71□□□□□ -1.18
RAB5C-206ENST00000550406 FAM229BQ4G0N7 80 aa7.71□□□□□ -1.18
RAB5C-206ENST00000550406 LINC00483Q53H64 154 aa7.71□□□□□ -1.18
RAB5C-206ENST00000550406 M0R143 59 aa7.7□□□□□ -1.18
RAB5C-206ENST00000550406 TSPAN13O95857 204 aa7.7□□□□□ -1.18
RAB5C-206ENST00000550406 Q1RN00 199 aa7.7□□□□□ -1.18
RAB5C-206ENST00000550406 GAGE2AQ6NT46 116 aa7.7□□□□□ -1.18
RAB5C-206ENST00000550406 ZNF706Q9Y5V0 76 aaPredicted RBP7.7□□□□□ -1.18
RAB5C-206ENST00000550406 J3QL48 77 aa7.69□□□□□ -1.18
RAB5C-206ENST00000550406 TRIAP1O43715 76 aa7.69□□□□□ -1.18
RAB5C-206ENST00000550406 LINC01547P58512 204 aaPredicted RBP7.69□□□□□ -1.18
RAB5C-206ENST00000550406 CRYGAP11844 174 aa7.68□□□□□ -1.18
RAB5C-206ENST00000550406 C3orf22Q8N5N4 141 aa7.68□□□□□ -1.18
RAB5C-206ENST00000550406 FAM218AQ96MZ4 157 aa7.68□□□□□ -1.18
RAB5C-206ENST00000550406 SPRR1BP22528 89 aa7.67□□□□□ -1.18
RAB5C-206ENST00000550406 HERC1Q15751 4861 aa7.66□□□□□ -1.18
RAB5C-206ENST00000550406 hADV29S1A0JD25 119 aa7.66□□□□□ -1.18
RAB5C-206ENST00000550406 H0YGX0 51 aa7.65□□□□□ -1.18
RAB5C-206ENST00000550406 IGLV5-48A0A075B6I7 105 aa7.64□□□□□ -1.19
RAB5C-206ENST00000550406 SLC25A20O43772 301 aa7.64□□□□□ -1.19
RAB5C-206ENST00000550406 BATFQ16520 125 aa7.64□□□□□ -1.19
RAB5C-206ENST00000550406 DEFB105AQ8NG35 78 aa7.64□□□□□ -1.19
RAB5C-206ENST00000550406 PSMB2P49721 201 aa7.63□□□□□ -1.19
RAB5C-206ENST00000550406 Q6ZQY7 126 aa7.63□□□□□ -1.19
RAB5C-206ENST00000550406 SMIM29Q86T20 159 aa7.63□□□□□ -1.19
RAB5C-206ENST00000550406 Q8N377 158 aa7.63□□□□□ -1.19
RAB5C-206ENST00000550406 TYMSOSQ8TAI1 123 aa7.63□□□□□ -1.19
RAB5C-206ENST00000550406 CLEC2BQ92478 149 aa7.63□□□□□ -1.19
RAB5C-206ENST00000550406 TEX49A0A1B0GTD5 131 aa7.62□□□□□ -1.19
RAB5C-206ENST00000550406 NAA38Q9BRA0 125 aaKnown RBP7.62□□□□□ -1.19
RAB5C-206ENST00000550406 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP7.61□□□□□ -1.19
RAB5C-206ENST00000550406 SNHG12Q9BXW3 62 aa7.61□□□□□ -1.19
RAB5C-206ENST00000550406 DMBT1Q9UGM3 2413 aaPredicted RBP7.6□□□□□ -1.19
RAB5C-206ENST00000550406 IGLV9-49A0A0B4J1Y8 123 aa7.6□□□□□ -1.19
RAB5C-206ENST00000550406 A0A1B0GX51 115 aa7.59□□□□□ -1.19
RAB5C-206ENST00000550406 TAX1BP3O14907 124 aa7.59□□□□□ -1.19
RAB5C-206ENST00000550406 PCP4L1A6NKN8 68 aa7.58□□□□□ -1.2
RAB5C-206ENST00000550406 COX6CP09669 75 aa7.58□□□□□ -1.2
RAB5C-206ENST00000550406 MOBPQ13875 183 aa7.58□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms