RNA–Protein interactions for RNA: ENST00000550335.5

HCFC2-204, Transcript of host cell factor C2, humanhuman

TSL 5

Gene HCFC2, Length 1,223 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2-204ENST00000550335 MANBALQ9NQG1 85 aa2.2□□□□□ -2.06
HCFC2-204ENST00000550335 CDC42SE1Q9NRR8 79 aa2.2□□□□□ -2.06
HCFC2-204ENST00000550335 A0A0J9YY99 117 aa2.19□□□□□ -2.06
HCFC2-204ENST00000550335 TRBV10-1A0A0K0K1A3 114 aa2.19□□□□□ -2.06
HCFC2-204ENST00000550335 PRB4P10163 310 aaPredicted RBP2.19□□□□□ -2.06
HCFC2-204ENST00000550335 ASIPP42127 132 aa2.19□□□□□ -2.06
HCFC2-204ENST00000550335 CRIP1P50238 77 aa2.19□□□□□ -2.06
HCFC2-204ENST00000550335 NDUFA6P56556 154 aa2.19□□□□□ -2.06
HCFC2-204ENST00000550335 RHOHQ15669 191 aa2.19□□□□□ -2.06
HCFC2-204ENST00000550335 CFAP126Q5VTH2 177 aa2.19□□□□□ -2.06
HCFC2-204ENST00000550335 Q86TA4 180 aa2.19□□□□□ -2.06
HCFC2-204ENST00000550335 FAM213BQ8TBF2 198 aa2.19□□□□□ -2.06
HCFC2-204ENST00000550335 LYSTQ99698 3801 aa2.19□□□□□ -2.06
HCFC2-204ENST00000550335 HYDINQ4G0P3 5121 aa2.18□□□□□ -2.06
HCFC2-204ENST00000550335 A0A087WWC5 75 aa2.18□□□□□ -2.06
HCFC2-204ENST00000550335 ARMS2P0C7Q2 107 aa2.18□□□□□ -2.06
HCFC2-204ENST00000550335 LINC01556Q5JQF7 62 aa2.18□□□□□ -2.06
HCFC2-204ENST00000550335 LELP1Q5T871 98 aa2.18□□□□□ -2.06
HCFC2-204ENST00000550335 UNQ6190/PRO20217Q6UXQ8 127 aa2.18□□□□□ -2.06
HCFC2-204ENST00000550335 BAGE2Q86Y30 109 aa2.18□□□□□ -2.06
HCFC2-204ENST00000550335 Q8N814 137 aa2.18□□□□□ -2.06
HCFC2-204ENST00000550335 DNAH1Q9P2D7 4330 aa2.18□□□□□ -2.06
HCFC2-204ENST00000550335 SACSQ9NZJ4 4579 aa2.17□□□□□ -2.06
HCFC2-204ENST00000550335 A0A087WX48 190 aa2.17□□□□□ -2.06
HCFC2-204ENST00000550335 F2Z2F3 143 aa2.17□□□□□ -2.06
HCFC2-204ENST00000550335 M0R2N4 97 aa2.17□□□□□ -2.06
HCFC2-204ENST00000550335 ERC2-IT1O76042 136 aa2.17□□□□□ -2.06
HCFC2-204ENST00000550335 DNAL4O96015 105 aa2.17□□□□□ -2.06
HCFC2-204ENST00000550335 SFTA3P0C7M3 94 aa2.17□□□□□ -2.06
HCFC2-204ENST00000550335 LINC00694P0DN24 101 aa2.17□□□□□ -2.06
HCFC2-204ENST00000550335 EVI2AP22794 236 aa2.17□□□□□ -2.06
HCFC2-204ENST00000550335 C9orf62Q8N4C0 152 aa2.17□□□□□ -2.06
HCFC2-204ENST00000550335 ATP6V0E2Q8NHE4 81 aa2.17□□□□□ -2.06
HCFC2-204ENST00000550335 GNG13Q9P2W3 67 aa2.17□□□□□ -2.06
HCFC2-204ENST00000550335 MUC4Q99102 2169 aa2.17□□□□□ -2.06
HCFC2-204ENST00000550335 PLECQ15149 4684 aaKnown RBP2.17□□□□□ -2.06
HCFC2-204ENST00000550335 DYNC2H1Q8NCM8 4307 aaKnown RBP2.17□□□□□ -2.06
HCFC2-204ENST00000550335 BIRC6Q9NR09 4857 aa2.16□□□□□ -2.06
HCFC2-204ENST00000550335 TRBV7-3A0A075B6L6 115 aa2.16□□□□□ -2.06
HCFC2-204ENST00000550335 hDV103S1A0JD37 113 aa2.16□□□□□ -2.06
HCFC2-204ENST00000550335 H3BVH4 76 aa2.16□□□□□ -2.06
HCFC2-204ENST00000550335 IGLC6P0CF74 106 aa2.16□□□□□ -2.06
HCFC2-204ENST00000550335 GNG4P50150 75 aa2.16□□□□□ -2.06
HCFC2-204ENST00000550335 FOXA3P55318 350 aaPredicted RBP2.16□□□□□ -2.06
HCFC2-204ENST00000550335 PKIAP61925 76 aa2.16□□□□□ -2.06
HCFC2-204ENST00000550335 CNBPP62633 177 aaKnown RBP2.16□□□□□ -2.06
HCFC2-204ENST00000550335 CNFNQ9BYD5 112 aa2.16□□□□□ -2.06
HCFC2-204ENST00000550335 KMT2AQ03164 3969 aa2.16□□□□□ -2.06
HCFC2-204ENST00000550335 EPPK1P58107 5090 aaKnown RBP2.16□□□□□ -2.06
HCFC2-204ENST00000550335 UBE2D3P61077 147 aa2.15□□□□□ -2.07
HCFC2-204ENST00000550335 UBE2D2P62837 147 aa2.15□□□□□ -2.07
HCFC2-204ENST00000550335 SPANXN1Q5VSR9 72 aa2.15□□□□□ -2.07
HCFC2-204ENST00000550335 PHF5AQ7RTV0 110 aaKnown RBP2.15□□□□□ -2.07
HCFC2-204ENST00000550335 WFDC10BQ8IUB3 73 aa2.15□□□□□ -2.07
HCFC2-204ENST00000550335 AP1S3Q96PC3 154 aa2.15□□□□□ -2.07
HCFC2-204ENST00000550335 ALMS1Q8TCU4 4167 aa2.14□□□□□ -2.07
HCFC2-204ENST00000550335 A0A087WTM6 91 aa2.14□□□□□ -2.07
HCFC2-204ENST00000550335 Q0VG73 95 aa2.14□□□□□ -2.07
HCFC2-204ENST00000550335 CIRBPQ14011 172 aaKnown RBP2.14□□□□□ -2.07
HCFC2-204ENST00000550335 ALKAL2Q6UX46 152 aa2.14□□□□□ -2.07
HCFC2-204ENST00000550335 OR10AG1Q8NH19 301 aa2.14□□□□□ -2.07
HCFC2-204ENST00000550335 CYSTM1Q9H1C7 97 aa2.14□□□□□ -2.07
HCFC2-204ENST00000550335 DPH3P1Q9H4G8 78 aa2.14□□□□□ -2.07
HCFC2-204ENST00000550335 M0QY20 66 aa2.13□□□□□ -2.07
HCFC2-204ENST00000550335 NCR2O95944 276 aa2.13□□□□□ -2.07
HCFC2-204ENST00000550335 ZNF56Q15929 161 aa2.13□□□□□ -2.07
HCFC2-204ENST00000550335 IQCJQ1A5X6 159 aa2.13□□□□□ -2.07
HCFC2-204ENST00000550335 FAM74A4Q5TZK3 123 aa2.13□□□□□ -2.07
HCFC2-204ENST00000550335 Q6ZSA8 131 aa2.13□□□□□ -2.07
HCFC2-204ENST00000550335 TSKUQ8WUA8 353 aa2.13□□□□□ -2.07
HCFC2-204ENST00000550335 NIT2Q9NQR4 276 aa2.13□□□□□ -2.07
HCFC2-204ENST00000550335 ORMDL1Q9P0S3 153 aa2.13□□□□□ -2.07
HCFC2-204ENST00000550335 TRBV25-1A0A075B6N4 114 aa2.12□□□□□ -2.07
HCFC2-204ENST00000550335 IGHV1-24A0A0C4DH33 117 aa2.12□□□□□ -2.07
HCFC2-204ENST00000550335 IGHV1-58A0A0C4DH39 117 aa2.12□□□□□ -2.07
HCFC2-204ENST00000550335 ZNF727A8MUV8 499 aa2.12□□□□□ -2.07
HCFC2-204ENST00000550335 PPP1R17O96001 155 aa2.12□□□□□ -2.07
HCFC2-204ENST00000550335 IGHV3-30P01768 117 aa2.12□□□□□ -2.07
HCFC2-204ENST00000550335 IGHV3-33P01772 117 aa2.12□□□□□ -2.07
HCFC2-204ENST00000550335 IGHV3-30-5P0DP03 117 aa2.12□□□□□ -2.07
HCFC2-204ENST00000550335 PEA15Q15121 130 aa2.12□□□□□ -2.07
HCFC2-204ENST00000550335 TEN1Q86WV5 123 aa2.12□□□□□ -2.07
HCFC2-204ENST00000550335 PRELID3AQ96N28 172 aa2.12□□□□□ -2.07
HCFC2-204ENST00000550335 SMIM7Q9BQ49 75 aa2.12□□□□□ -2.07
HCFC2-204ENST00000550335 TMEM191AQ9H0A3 160 aa2.12□□□□□ -2.07
HCFC2-204ENST00000550335 VPS13DQ5THJ4 4388 aa2.11□□□□□ -2.07
HCFC2-204ENST00000550335 A0A1B0GUT8 65 aa2.11□□□□□ -2.07
HCFC2-204ENST00000550335 F8W1H4 67 aa2.11□□□□□ -2.07
HCFC2-204ENST00000550335 J3KT08 172 aa2.11□□□□□ -2.07
HCFC2-204ENST00000550335 FABP4P15090 132 aa2.11□□□□□ -2.07
HCFC2-204ENST00000550335 ZNF25P17030 456 aaPredicted RBP2.11□□□□□ -2.07
HCFC2-204ENST00000550335 ENHOQ6UWT2 76 aa2.11□□□□□ -2.07
HCFC2-204ENST00000550335 V9GYV3 84 aa2.11□□□□□ -2.07
HCFC2-204ENST00000550335 TRAV13-1A0A0B4J241 112 aa2.1□□□□□ -2.07
HCFC2-204ENST00000550335 TRBV27A0A0K0K1C4 114 aa2.1□□□□□ -2.07
HCFC2-204ENST00000550335 SMIM27A0A1W2PRY6 76 aa2.1□□□□□ -2.07
HCFC2-204ENST00000550335 HIGD1CA8MV81 97 aa2.1□□□□□ -2.07
HCFC2-204ENST00000550335 TMEM262E9PQX1 116 aa2.1□□□□□ -2.07
HCFC2-204ENST00000550335 CCL25O15444 150 aa2.1□□□□□ -2.07
HCFC2-204ENST00000550335 ANGP03950 147 aaKnown RBP2.1□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 70 ms