RNA–Protein interactions for RNA: ENST00000549770.1

NPAS3-207, Transcript of neuronal PAS domain protein 3, humanhuman

TSL 3

Gene NPAS3, Length 622 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-207ENST00000549770 S100A7L2Q5SY68 101 aa4.27□□□□□ -1.73
NPAS3-207ENST00000549770 SERTAD4-AS1Q5TG53 156 aa4.27□□□□□ -1.73
NPAS3-207ENST00000549770 SFTA2Q6UW10 78 aa4.27□□□□□ -1.73
NPAS3-207ENST00000549770 RPL36ALQ969Q0 106 aaKnown RBP4.27□□□□□ -1.73
NPAS3-207ENST00000549770 RNF185Q96GF1 192 aa4.27□□□□□ -1.73
NPAS3-207ENST00000549770 TRAV7A0A075B6U4 112 aa4.26□□□□□ -1.73
NPAS3-207ENST00000549770 TRAV13-2A0A0B4J235 113 aa4.26□□□□□ -1.73
NPAS3-207ENST00000549770 LECT2O14960 151 aa4.26□□□□□ -1.73
NPAS3-207ENST00000549770 TIMM17BO60830 172 aa4.26□□□□□ -1.73
NPAS3-207ENST00000549770 KRTAP15-1Q3LI76 137 aa4.26□□□□□ -1.73
NPAS3-207ENST00000549770 LYZL1Q6UWQ5 148 aa4.26□□□□□ -1.73
NPAS3-207ENST00000549770 DEFB104AQ8WTQ1 72 aa4.26□□□□□ -1.73
NPAS3-207ENST00000549770 TOMM6Q96B49 74 aa4.26□□□□□ -1.73
NPAS3-207ENST00000549770 TRBV10-1A0A0K0K1A3 114 aa4.25□□□□□ -1.73
NPAS3-207ENST00000549770 SUMO2P61956 95 aaKnown RBP4.25□□□□□ -1.73
NPAS3-207ENST00000549770 Q1RN00 199 aa4.25□□□□□ -1.73
NPAS3-207ENST00000549770 KLK12Q9UKR0 248 aa4.25□□□□□ -1.73
NPAS3-207ENST00000549770 KIF25-AS1Q9Y6Z4 181 aa4.25□□□□□ -1.73
NPAS3-207ENST00000549770 LRCOL1A6NCL2 159 aa4.24□□□□□ -1.73
NPAS3-207ENST00000549770 NDUFS5O43920 106 aa4.24□□□□□ -1.73
NPAS3-207ENST00000549770 CDK2AP2O75956 126 aa4.24□□□□□ -1.73
NPAS3-207ENST00000549770 KRTAP10-1P60331 282 aa4.24□□□□□ -1.73
NPAS3-207ENST00000549770 HAMPP81172 84 aa4.24□□□□□ -1.73
NPAS3-207ENST00000549770 SUMO4Q6EEV6 95 aa4.24□□□□□ -1.73
NPAS3-207ENST00000549770 SMIM2Q9BVW6 85 aa4.24□□□□□ -1.73
NPAS3-207ENST00000549770 RBM12B-AS1Q9P1G2 102 aa4.24□□□□□ -1.73
NPAS3-207ENST00000549770 IGKV2D-24A0A075B6R9 120 aa4.23□□□□□ -1.73
NPAS3-207ENST00000549770 IGLV5-52A0A0A0MRZ9 124 aa4.23□□□□□ -1.73
NPAS3-207ENST00000549770 TRBV6-8A0A0A6YYG3 113 aa4.23□□□□□ -1.73
NPAS3-207ENST00000549770 A0A0J9YXY3 114 aa4.23□□□□□ -1.73
NPAS3-207ENST00000549770 TRBV27A0A0K0K1C4 114 aa4.23□□□□□ -1.73
NPAS3-207ENST00000549770 IGIPA6NJ69 53 aa4.23□□□□□ -1.73
NPAS3-207ENST00000549770 M0QY20 66 aa4.23□□□□□ -1.73
NPAS3-207ENST00000549770 COX7A2LO14548 114 aa4.23□□□□□ -1.73
NPAS3-207ENST00000549770 ERC2-IT1O76042 136 aa4.23□□□□□ -1.73
NPAS3-207ENST00000549770 CLPSL2Q6UWE3 100 aa4.23□□□□□ -1.73
NPAS3-207ENST00000549770 NTM-AS1Q6ZSK4 140 aa4.23□□□□□ -1.73
NPAS3-207ENST00000549770 NRACQ8N912 160 aa4.23□□□□□ -1.73
NPAS3-207ENST00000549770 VPS13BQ7Z7G8 4022 aa4.22□□□□□ -1.73
NPAS3-207ENST00000549770 IGLV4-69A0A075B6H9 119 aa4.22□□□□□ -1.73
NPAS3-207ENST00000549770 IGLV2-33A0A075B6J2 118 aaPredicted RBP4.22□□□□□ -1.73
NPAS3-207ENST00000549770 TRAV8-3A0A0A6YYJ7 113 aa4.22□□□□□ -1.73
NPAS3-207ENST00000549770 LEPROTO15243 131 aa4.22□□□□□ -1.73
NPAS3-207ENST00000549770 DNAL4O96015 105 aa4.22□□□□□ -1.73
NPAS3-207ENST00000549770 ANGP03950 147 aaKnown RBP4.22□□□□□ -1.73
NPAS3-207ENST00000549770 Q6ZVQ6 151 aa4.22□□□□□ -1.73
NPAS3-207ENST00000549770 C20orf197Q8N268 126 aa4.22□□□□□ -1.73
NPAS3-207ENST00000549770 Q8N814 137 aa4.22□□□□□ -1.73
NPAS3-207ENST00000549770 OBSCN-AS1Q96MR7 158 aa4.22□□□□□ -1.73
NPAS3-207ENST00000549770 TSPEAR-AS2P59090 65 aa4.21□□□□□ -1.74
NPAS3-207ENST00000549770 Q1T7F1 81 aa4.21□□□□□ -1.74
NPAS3-207ENST00000549770 ENHOQ6UWT2 76 aa4.21□□□□□ -1.74
NPAS3-207ENST00000549770 RMI2Q96E14 147 aa4.21□□□□□ -1.74
NPAS3-207ENST00000549770 RPL39LQ96EH5 51 aaKnown RBP4.21□□□□□ -1.74
NPAS3-207ENST00000549770 SCGB3A1Q96QR1 104 aa4.21□□□□□ -1.74
NPAS3-207ENST00000549770 TIMM17AQ99595 171 aa4.21□□□□□ -1.74
NPAS3-207ENST00000549770 SRRM2Q9UQ35 2752 aaKnown RBP4.21□□□□□ -1.74
NPAS3-207ENST00000549770 SMKR1H3BMG3 65 aa4.2□□□□□ -1.74
NPAS3-207ENST00000549770 CRPP02741 224 aa4.2□□□□□ -1.74
NPAS3-207ENST00000549770 SMR3BP02814 79 aaPredicted RBP4.2□□□□□ -1.74
NPAS3-207ENST00000549770 UBE2BP63146 152 aa4.2□□□□□ -1.74
NPAS3-207ENST00000549770 RBM3P98179 157 aaKnown RBP4.2□□□□□ -1.74
NPAS3-207ENST00000549770 SS18Q15532 418 aa4.2□□□□□ -1.74
NPAS3-207ENST00000549770 MIAQ16674 131 aa4.2□□□□□ -1.74
NPAS3-207ENST00000549770 LINC00269Q8N2A0 174 aa4.2□□□□□ -1.74
NPAS3-207ENST00000549770 TMEM141Q96I45 108 aa4.2□□□□□ -1.74
NPAS3-207ENST00000549770 CHCHD7Q9BUK0 85 aa4.2□□□□□ -1.74
NPAS3-207ENST00000549770 MYCBP2O75592 4640 aa4.19□□□□□ -1.74
NPAS3-207ENST00000549770 HERC1Q15751 4861 aa4.19□□□□□ -1.74
NPAS3-207ENST00000549770 IGLV10-54A0A075B6I4 117 aa4.19□□□□□ -1.74
NPAS3-207ENST00000549770 I3L3M4 83 aa4.19□□□□□ -1.74
NPAS3-207ENST00000549770 GAS8-AS1O95177 125 aa4.19□□□□□ -1.74
NPAS3-207ENST00000549770 PPP1R17O96001 155 aa4.19□□□□□ -1.74
NPAS3-207ENST00000549770 PRSS2P07478 247 aa4.19□□□□□ -1.74
NPAS3-207ENST00000549770 LITAFQ99732 161 aa4.19□□□□□ -1.74
NPAS3-207ENST00000549770 IGLV4-60A0A075B6I1 120 aa4.18□□□□□ -1.74
NPAS3-207ENST00000549770 C8orf87E5RJ46 101 aa4.18□□□□□ -1.74
NPAS3-207ENST00000549770 F8WEM9 126 aa4.18□□□□□ -1.74
NPAS3-207ENST00000549770 UBE2L6O14933 153 aa4.18□□□□□ -1.74
NPAS3-207ENST00000549770 PHF5AQ7RTV0 110 aaKnown RBP4.18□□□□□ -1.74
NPAS3-207ENST00000549770 MUSTN1Q8IVN3 82 aa4.18□□□□□ -1.74
NPAS3-207ENST00000549770 CLEC2BQ92478 149 aa4.18□□□□□ -1.74
NPAS3-207ENST00000549770 LINC00474Q9P2X8 69 aa4.18□□□□□ -1.74
NPAS3-207ENST00000549770 C22orf24Q9Y442 160 aa4.18□□□□□ -1.74
NPAS3-207ENST00000549770 IGKV2D-29A0A075B6S2 120 aaPredicted RBP4.17□□□□□ -1.74
NPAS3-207ENST00000549770 IGKV3OR2-268A0A0C4DH90 116 aa4.17□□□□□ -1.74
NPAS3-207ENST00000549770 IGKV2-29A2NJV5 120 aaPredicted RBP4.17□□□□□ -1.74
NPAS3-207ENST00000549770 REG3AQ06141 175 aa4.17□□□□□ -1.74
NPAS3-207ENST00000549770 Q5VSD8 79 aa4.17□□□□□ -1.74
NPAS3-207ENST00000549770 C2orf66Q6UXQ4 117 aa4.17□□□□□ -1.74
NPAS3-207ENST00000549770 C20orf203Q8NBC4 194 aa4.17□□□□□ -1.74
NPAS3-207ENST00000549770 A0A087WVE0 104 aa4.16□□□□□ -1.74
NPAS3-207ENST00000549770 TRBV7-4A0A0J9YYF1 115 aa4.16□□□□□ -1.74
NPAS3-207ENST00000549770 ZNF73O43830 326 aaPredicted RBP4.16□□□□□ -1.74
NPAS3-207ENST00000549770 PRR34Q9NV39 138 aa4.16□□□□□ -1.74
NPAS3-207ENST00000549770 H7C2G1 150 aa4.15□□□□□ -1.75
NPAS3-207ENST00000549770 M0R378 163 aa4.15□□□□□ -1.75
NPAS3-207ENST00000549770 TSHBP01222 138 aa4.15□□□□□ -1.75
NPAS3-207ENST00000549770 RPL28P46779 137 aaKnown RBP4.15□□□□□ -1.75
NPAS3-207ENST00000549770 KRTAP26-1Q6PEX3 210 aa4.15□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms