RNA–Protein interactions for RNA: ENST00000549678.1

PTCH1-219, Transcript of patched 1, humanhuman

TSL 4

Gene PTCH1, Length 578 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-219ENST00000549678 SOSTDC1Q6X4U4 206 aa4.35□□□□□ -1.71
PTCH1-219ENST00000549678 PCP2Q8IVA1 136 aa4.35□□□□□ -1.71
PTCH1-219ENST00000549678 LINC00518Q8N0U6 118 aa4.35□□□□□ -1.71
PTCH1-219ENST00000549678 SPANXDQ9BXN6 97 aa4.35□□□□□ -1.71
PTCH1-219ENST00000549678 KCNQ1DNQ9H478 68 aa4.35□□□□□ -1.71
PTCH1-219ENST00000549678 KRTAP13-1Q8IUC0 172 aa4.34□□□□□ -1.71
PTCH1-219ENST00000549678 ANAPC11Q9NYG5 84 aa4.34□□□□□ -1.71
PTCH1-219ENST00000549678 A6NDN8 102 aa4.33□□□□□ -1.72
PTCH1-219ENST00000549678 C5orf52A6NGY3 159 aa4.33□□□□□ -1.72
PTCH1-219ENST00000549678 ZNF73O43830 326 aaPredicted RBP4.33□□□□□ -1.72
PTCH1-219ENST00000549678 IFITM1P13164 125 aa4.33□□□□□ -1.72
PTCH1-219ENST00000549678 SPRR1AP35321 89 aa4.33□□□□□ -1.72
PTCH1-219ENST00000549678 FAM229BQ4G0N7 80 aa4.33□□□□□ -1.72
PTCH1-219ENST00000549678 Q6ZVH6 145 aa4.33□□□□□ -1.72
PTCH1-219ENST00000549678 SMCR5Q8TEV8 140 aa4.33□□□□□ -1.72
PTCH1-219ENST00000549678 LITAFQ99732 161 aa4.33□□□□□ -1.72
PTCH1-219ENST00000549678 PPDPFQ9H3Y8 114 aa4.33□□□□□ -1.72
PTCH1-219ENST00000549678 A0A087X002 238 aa4.32□□□□□ -1.72
PTCH1-219ENST00000549678 B5MCH6 92 aa4.32□□□□□ -1.72
PTCH1-219ENST00000549678 EIF4EBP3O60516 100 aaPredicted RBP4.32□□□□□ -1.72
PTCH1-219ENST00000549678 TSPAN13O95857 204 aa4.32□□□□□ -1.72
PTCH1-219ENST00000549678 IGLV6-57P01721 117 aa4.32□□□□□ -1.72
PTCH1-219ENST00000549678 C4orf48Q5BLP8 95 aa4.31□□□□□ -1.72
PTCH1-219ENST00000549678 GAGE2AQ6NT46 116 aa4.31□□□□□ -1.72
PTCH1-219ENST00000549678 Q6ZRX8 168 aa4.31□□□□□ -1.72
PTCH1-219ENST00000549678 MUSTN1Q8IVN3 82 aa4.31□□□□□ -1.72
PTCH1-219ENST00000549678 LINC00304Q8N9R0 145 aa4.31□□□□□ -1.72
PTCH1-219ENST00000549678 SPRR4Q96PI1 79 aa4.31□□□□□ -1.72
PTCH1-219ENST00000549678 VAMP8Q9BV40 100 aa4.31□□□□□ -1.72
PTCH1-219ENST00000549678 PRR4Q16378 134 aa4.3□□□□□ -1.72
PTCH1-219ENST00000549678 C6orf99Q4VX62 202 aa4.3□□□□□ -1.72
PTCH1-219ENST00000549678 HIST1H4GQ99525 98 aa4.3□□□□□ -1.72
PTCH1-219ENST00000549678 PAM16Q9Y3D7 125 aa4.3□□□□□ -1.72
PTCH1-219ENST00000549678 IGLV9-49A0A0B4J1Y8 123 aa4.29□□□□□ -1.72
PTCH1-219ENST00000549678 TRAV13-2A0A0B4J235 113 aa4.29□□□□□ -1.72
PTCH1-219ENST00000549678 KRTAP4-16G5E9R7 235 aaPredicted RBP4.29□□□□□ -1.72
PTCH1-219ENST00000549678 COX7BP24311 80 aa4.29□□□□□ -1.72
PTCH1-219ENST00000549678 SPATA45Q537H7 98 aa4.29□□□□□ -1.72
PTCH1-219ENST00000549678 C9orf153Q5TBE3 101 aa4.29□□□□□ -1.72
PTCH1-219ENST00000549678 C3orf22Q8N5N4 141 aa4.29□□□□□ -1.72
PTCH1-219ENST00000549678 COX8AP10176 69 aa4.28□□□□□ -1.72
PTCH1-219ENST00000549678 KRTAP13-2Q52LG2 175 aa4.28□□□□□ -1.72
PTCH1-219ENST00000549678 Q9BRP9 147 aa4.28□□□□□ -1.72
PTCH1-219ENST00000549678 DHRS4-AS1Q9P1J3 65 aa4.28□□□□□ -1.72
PTCH1-219ENST00000549678 ERC2-IT1O76042 136 aa4.27□□□□□ -1.73
PTCH1-219ENST00000549678 TAL2Q16559 108 aa4.27□□□□□ -1.73
PTCH1-219ENST00000549678 SLC25A34Q6PIV7 304 aa4.27□□□□□ -1.73
PTCH1-219ENST00000549678 C14orf144Q96I85 54 aa4.27□□□□□ -1.73
PTCH1-219ENST00000549678 C12orf57Q99622 126 aa4.27□□□□□ -1.73
PTCH1-219ENST00000549678 A0A1B0GWB2 263 aa4.26□□□□□ -1.73
PTCH1-219ENST00000549678 A4D1N5 150 aa4.26□□□□□ -1.73
PTCH1-219ENST00000549678 SLC25A20O43772 301 aa4.26□□□□□ -1.73
PTCH1-219ENST00000549678 ELOF1P60002 83 aaKnown RBP4.26□□□□□ -1.73
PTCH1-219ENST00000549678 MOBPQ13875 183 aa4.26□□□□□ -1.73
PTCH1-219ENST00000549678 VAMP3Q15836 100 aa4.26□□□□□ -1.73
PTCH1-219ENST00000549678 NHP2Q9NX24 153 aaKnown RBP4.26□□□□□ -1.73
PTCH1-219ENST00000549678 MUC2Q02817 5179 aa4.25□□□□□ -1.73
PTCH1-219ENST00000549678 SPAG11AQ6PDA7 123 aa4.25□□□□□ -1.73
PTCH1-219ENST00000549678 ST20-AS1Q8NBB2 130 aa4.25□□□□□ -1.73
PTCH1-219ENST00000549678 Q8NBF4 154 aa4.25□□□□□ -1.73
PTCH1-219ENST00000549678 DEFB105AQ8NG35 78 aa4.25□□□□□ -1.73
PTCH1-219ENST00000549678 RAB37Q96AX2 223 aa4.25□□□□□ -1.73
PTCH1-219ENST00000549678 TRBV7-6A0A0J9YX20 115 aa4.24□□□□□ -1.73
PTCH1-219ENST00000549678 H7C2G1 150 aa4.24□□□□□ -1.73
PTCH1-219ENST00000549678 DLEU1O43261 78 aa4.24□□□□□ -1.73
PTCH1-219ENST00000549678 Q1RN00 199 aa4.24□□□□□ -1.73
PTCH1-219ENST00000549678 LINC00483Q53H64 154 aa4.24□□□□□ -1.73
PTCH1-219ENST00000549678 SMIM11BQ8TCY0 68 aa4.24□□□□□ -1.73
PTCH1-219ENST00000549678 LAMTOR3Q9UHA4 124 aa4.24□□□□□ -1.73
PTCH1-219ENST00000549678 LOC105371267A0A1B0GV96 52 aa4.23□□□□□ -1.73
PTCH1-219ENST00000549678 TMEM238LA0A1B0GVL6 79 aa4.23□□□□□ -1.73
PTCH1-219ENST00000549678 A6NJY4 79 aa4.23□□□□□ -1.73
PTCH1-219ENST00000549678 RETNLBQ9BQ08 111 aa4.23□□□□□ -1.73
PTCH1-219ENST00000549678 MUC17Q685J3 4493 aa4.22□□□□□ -1.73
PTCH1-219ENST00000549678 SNCGO76070 127 aa4.22□□□□□ -1.73
PTCH1-219ENST00000549678 CTAG1AP78358 180 aa4.22□□□□□ -1.73
PTCH1-219ENST00000549678 SSBP3-AS1Q7Z2R9 100 aa4.22□□□□□ -1.73
PTCH1-219ENST00000549678 HIGD1BQ9P298 99 aa4.22□□□□□ -1.73
PTCH1-219ENST00000549678 TEX49A0A1B0GTD5 131 aa4.21□□□□□ -1.74
PTCH1-219ENST00000549678 F8WEM9 126 aa4.21□□□□□ -1.74
PTCH1-219ENST00000549678 SPINK1P00995 79 aa4.21□□□□□ -1.74
PTCH1-219ENST00000549678 PYY3Q5JQD4 70 aa4.21□□□□□ -1.74
PTCH1-219ENST00000549678 BVES-AS1Q5T3Y7 98 aa4.21□□□□□ -1.74
PTCH1-219ENST00000549678 FAT4Q6V0I7 4981 aa4.2□□□□□ -1.74
PTCH1-219ENST00000549678 hADV29S1A0JD25 119 aa4.2□□□□□ -1.74
PTCH1-219ENST00000549678 CEND1Q8N111 149 aa4.2□□□□□ -1.74
PTCH1-219ENST00000549678 IGLV7-46A0A075B6I9 117 aa4.19□□□□□ -1.74
PTCH1-219ENST00000549678 A0A0U1RQV1 116 aa4.19□□□□□ -1.74
PTCH1-219ENST00000549678 SPRR1BP22528 89 aa4.19□□□□□ -1.74
PTCH1-219ENST00000549678 HRCT1Q6UXD1 115 aa4.19□□□□□ -1.74
PTCH1-219ENST00000549678 C2orf91Q6ZV80 131 aa4.19□□□□□ -1.74
PTCH1-219ENST00000549678 LIMD2Q9BT23 127 aa4.19□□□□□ -1.74
PTCH1-219ENST00000549678 A0A0B4J2C4 111 aa4.18□□□□□ -1.74
PTCH1-219ENST00000549678 CFC1BP0CG36 223 aa4.18□□□□□ -1.74
PTCH1-219ENST00000549678 CFC1P0CG37 223 aa4.18□□□□□ -1.74
PTCH1-219ENST00000549678 HSD52Q0P140 79 aa4.18□□□□□ -1.74
PTCH1-219ENST00000549678 LINC00575Q6W349 94 aa4.18□□□□□ -1.74
PTCH1-219ENST00000549678 Q6ZQY7 126 aa4.18□□□□□ -1.74
PTCH1-219ENST00000549678 CDIP1Q9H305 208 aa4.18□□□□□ -1.74
PTCH1-219ENST00000549678 PRO1933Q9H354 126 aa4.18□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms