RNA–Protein interactions for RNA: ENST00000549162.5

SCAF11-212, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 1 (best) BASIC

Gene SCAF11, Length 3,934 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-212ENST00000549162 KRTAP10-8P60410 259 aa2.97□□□□□ -1.93
SCAF11-212ENST00000549162 SPAG11BQ08648 103 aa2.97□□□□□ -1.93
SCAF11-212ENST00000549162 SMIM13P0DJ93 91 aa2.97□□□□□ -1.93
SCAF11-212ENST00000549162 FLGP20930 4061 aaPredicted RBP2.97□□□□□ -1.93
SCAF11-212ENST00000549162 PSPHP1O15172 72 aa2.97□□□□□ -1.93
SCAF11-212ENST00000549162 ERC2-IT1O76042 136 aa2.97□□□□□ -1.93
SCAF11-212ENST00000549162 KRTAP1-4P0C5Y4 121 aa2.97□□□□□ -1.93
SCAF11-212ENST00000549162 PCP2Q8IVA1 136 aa2.97□□□□□ -1.93
SCAF11-212ENST00000549162 SS18L2Q9UHA2 77 aa2.97□□□□□ -1.93
SCAF11-212ENST00000549162 COL7A1Q02388 2944 aa2.96□□□□□ -1.94
SCAF11-212ENST00000549162 JMJD7-PLA2G4BH0Y9G9 81 aa2.96□□□□□ -1.94
SCAF11-212ENST00000549162 PMAIP1Q13794 54 aa2.96□□□□□ -1.94
SCAF11-212ENST00000549162 SSBP3-AS1Q7Z2R9 100 aa2.96□□□□□ -1.94
SCAF11-212ENST00000549162 FLNAP21333 2647 aaKnown RBP2.96□□□□□ -1.94
SCAF11-212ENST00000549162 IGHV6-1A0A0B4J1U7 121 aa2.95□□□□□ -1.94
SCAF11-212ENST00000549162 C1orf134Q5TEV5 83 aa2.95□□□□□ -1.94
SCAF11-212ENST00000549162 MUSTN1Q8IVN3 82 aa2.95□□□□□ -1.94
SCAF11-212ENST00000549162 MEGF8Q7Z7M0 2845 aa2.95□□□□□ -1.94
SCAF11-212ENST00000549162 A0A0U1RQV1 116 aa2.95□□□□□ -1.94
SCAF11-212ENST00000549162 RAB37Q96AX2 223 aa2.95□□□□□ -1.94
SCAF11-212ENST00000549162 FAM236DA0A1B0GTK5 79 aa2.95□□□□□ -1.94
SCAF11-212ENST00000549162 FAM236CP0DP71 79 aa2.95□□□□□ -1.94
SCAF11-212ENST00000549162 PSMB2P49721 201 aa2.95□□□□□ -1.94
SCAF11-212ENST00000549162 FXYD2P54710 66 aa2.95□□□□□ -1.94
SCAF11-212ENST00000549162 TMEM170BQ5T4T1 132 aa2.95□□□□□ -1.94
SCAF11-212ENST00000549162 FP248Q71RG6 208 aaPredicted RBP2.95□□□□□ -1.94
SCAF11-212ENST00000549162 SMCR5Q8TEV8 140 aa2.95□□□□□ -1.94
SCAF11-212ENST00000549162 A0A1W2PNM2 257 aa2.94□□□□□ -1.94
SCAF11-212ENST00000549162 ATXN8Q156A1 80 aa2.94□□□□□ -1.94
SCAF11-212ENST00000549162 C5orf38Q86SI9 138 aa2.94□□□□□ -1.94
SCAF11-212ENST00000549162 CSMD1Q96PZ7 3565 aa2.94□□□□□ -1.94
SCAF11-212ENST00000549162 CNTRLQ7Z7A1 2325 aa2.94□□□□□ -1.94
SCAF11-212ENST00000549162 CRPP02741 224 aa2.94□□□□□ -1.94
SCAF11-212ENST00000549162 ITPR2Q14571 2701 aa2.93□□□□□ -1.94
SCAF11-212ENST00000549162 LOC389332A0A1B0GUA5 103 aa2.93□□□□□ -1.94
SCAF11-212ENST00000549162 SPAG11AQ6PDA7 123 aa2.93□□□□□ -1.94
SCAF11-212ENST00000549162 TMEM256-PLSCR3K7ERE1 68 aa2.93□□□□□ -1.94
SCAF11-212ENST00000549162 CRYGAP11844 174 aa2.93□□□□□ -1.94
SCAF11-212ENST00000549162 TRAV23DV6A0A075B6W5 121 aa2.92□□□□□ -1.94
SCAF11-212ENST00000549162 PRM2P04554 102 aa2.92□□□□□ -1.94
SCAF11-212ENST00000549162 FAM74A4Q5TZK3 123 aa2.92□□□□□ -1.94
SCAF11-212ENST00000549162 TMEM262E9PQX1 116 aa2.92□□□□□ -1.94
SCAF11-212ENST00000549162 OPRPNQ99935 248 aaPredicted RBP2.92□□□□□ -1.94
SCAF11-212ENST00000549162 MAP1AP78559 2803 aaPredicted RBP2.92□□□□□ -1.94
SCAF11-212ENST00000549162 NIPBLQ6KC79 2804 aaeCLIP2.92□□□□□ -1.944e-7■■■■□ 19.6
SCAF11-212ENST00000549162 SPINK8P0C7L1 97 aa2.92□□□□□ -1.94
SCAF11-212ENST00000549162 C7orf33Q8WU49 177 aa2.92□□□□□ -1.94
SCAF11-212ENST00000549162 Q8N3U1 123 aa2.91□□□□□ -1.94
SCAF11-212ENST00000549162 Q9BRP9 147 aa2.91□□□□□ -1.94
SCAF11-212ENST00000549162 ZNF861PO60384 105 aa2.91□□□□□ -1.94
SCAF11-212ENST00000549162 DEFA6Q01524 100 aa2.91□□□□□ -1.94
SCAF11-212ENST00000549162 KRTAP13-3Q3SY46 172 aa2.91□□□□□ -1.94
SCAF11-212ENST00000549162 Q6ZQT0 140 aa2.91□□□□□ -1.94
SCAF11-212ENST00000549162 GTF2H5Q6ZYL4 71 aa2.91□□□□□ -1.94
SCAF11-212ENST00000549162 OR13C6PQ8NH95 151 aa2.91□□□□□ -1.94
SCAF11-212ENST00000549162 IGLV7-46A0A075B6I9 117 aa2.91□□□□□ -1.94
SCAF11-212ENST00000549162 ANGP03950 147 aaKnown RBP2.91□□□□□ -1.94
SCAF11-212ENST00000549162 SMIM11BQ8TCY0 68 aa2.91□□□□□ -1.94
SCAF11-212ENST00000549162 Q96NJ1 140 aa2.91□□□□□ -1.94
SCAF11-212ENST00000549162 VWFP04275 2813 aa2.91□□□□□ -1.94
SCAF11-212ENST00000549162 J3KT08 172 aa2.9□□□□□ -1.94
SCAF11-212ENST00000549162 ZNF73O43830 326 aaPredicted RBP2.9□□□□□ -1.94
SCAF11-212ENST00000549162 MIR7-3HGQ8N6C7 128 aa2.9□□□□□ -1.94
SCAF11-212ENST00000549162 DEFB130BP0DP73 79 aa2.9□□□□□ -1.95
SCAF11-212ENST00000549162 DEFB130AP0DP74 79 aa2.9□□□□□ -1.95
SCAF11-212ENST00000549162 KRTAP15-1Q3LI76 137 aa2.9□□□□□ -1.95
SCAF11-212ENST00000549162 SCGB1D4Q6XE38 83 aa2.9□□□□□ -1.95
SCAF11-212ENST00000549162 IGLV7-43P04211 117 aa2.9□□□□□ -1.95
SCAF11-212ENST00000549162 A0A096LNI7 61 aa2.89□□□□□ -1.95
SCAF11-212ENST00000549162 CCKP06307 115 aa2.89□□□□□ -1.95
SCAF11-212ENST00000549162 WFDC2Q14508 124 aa2.89□□□□□ -1.95
SCAF11-212ENST00000549162 DIRC1Q969H9 104 aa2.89□□□□□ -1.95
SCAF11-212ENST00000549162 ROS1P08922 2347 aa2.89□□□□□ -1.95
SCAF11-212ENST00000549162 UNQ6190/PRO20217Q6UXQ8 127 aa2.89□□□□□ -1.95
SCAF11-212ENST00000549162 ANAPC13Q9BS18 74 aa2.89□□□□□ -1.95
SCAF11-212ENST00000549162 KLK12Q9UKR0 248 aa2.89□□□□□ -1.95
SCAF11-212ENST00000549162 Q8N377 158 aa2.88□□□□□ -1.95
SCAF11-212ENST00000549162 TENM1Q9UKZ4 2725 aa2.88□□□□□ -1.95
SCAF11-212ENST00000549162 MP68P56378 58 aa2.88□□□□□ -1.95
SCAF11-212ENST00000549162 ABCA1O95477 2261 aa2.88□□□□□ -1.95
SCAF11-212ENST00000549162 TEX49A0A1B0GTD5 131 aa2.88□□□□□ -1.95
SCAF11-212ENST00000549162 H3BPC8 53 aa2.87□□□□□ -1.95
SCAF11-212ENST00000549162 COX7BP24311 80 aa2.87□□□□□ -1.95
SCAF11-212ENST00000549162 CKS1BP61024 79 aa2.87□□□□□ -1.95
SCAF11-212ENST00000549162 CAMK2N2Q96S95 79 aa2.87□□□□□ -1.95
SCAF11-212ENST00000549162 TCL1BO95988 128 aa2.87□□□□□ -1.95
SCAF11-212ENST00000549162 A0A1W2PNN7 141 aa2.87□□□□□ -1.95
SCAF11-212ENST00000549162 KRTAP10-2P60368 255 aa2.87□□□□□ -1.95
SCAF11-212ENST00000549162 KRTAP19-4Q3LI73 84 aa2.87□□□□□ -1.95
SCAF11-212ENST00000549162 LINC00472Q9H8W2 130 aa2.87□□□□□ -1.95
SCAF11-212ENST00000549162 BATFQ16520 125 aa2.87□□□□□ -1.95
SCAF11-212ENST00000549162 SPG11Q96JI7 2443 aa2.86□□□□□ -1.95
SCAF11-212ENST00000549162 SVILO95425 2214 aa2.86□□□□□ -1.95
SCAF11-212ENST00000549162 KRTAP16-1A8MUX0 517 aa2.86□□□□□ -1.95
SCAF11-212ENST00000549162 COX6CP09669 75 aa2.86□□□□□ -1.95
SCAF11-212ENST00000549162 KMT2CQ8NEZ4 4911 aaKnown RBP2.86□□□□□ -1.95
SCAF11-212ENST00000549162 MT1HL1P0DM35 61 aa2.86□□□□□ -1.95
SCAF11-212ENST00000549162 FABP2P12104 132 aa2.86□□□□□ -1.95
SCAF11-212ENST00000549162 ANKRD29Q8N6D5 301 aa2.86□□□□□ -1.95
SCAF11-212ENST00000549162 COL12A1Q99715 3063 aa2.86□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms