RNA–Protein interactions for RNA: ENST00000548874.5

CACNB3-210, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 3

Gene CACNB3, Length 581 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-210ENST00000548874 ZNF861PO60384 105 aa12.84□□□□□ -0.35
CACNB3-210ENST00000548874 SPINK6Q6UWN8 80 aa12.84□□□□□ -0.35
CACNB3-210ENST00000548874 INAFM2P0DMQ5 153 aa12.83□□□□□ -0.36
CACNB3-210ENST00000548874 FXYD2P54710 66 aa12.83□□□□□ -0.36
CACNB3-210ENST00000548874 FAM19A1Q7Z5A9 133 aa12.83□□□□□ -0.36
CACNB3-210ENST00000548874 TSTD3H0UI37 97 aa12.82□□□□□ -0.36
CACNB3-210ENST00000548874 ZNF73O43830 326 aaPredicted RBP12.82□□□□□ -0.36
CACNB3-210ENST00000548874 RPL28P46779 137 aaKnown RBP12.82□□□□□ -0.36
CACNB3-210ENST00000548874 UBE2AP49459 152 aa12.82□□□□□ -0.36
CACNB3-210ENST00000548874 H0Y9J4 135 aa12.81□□□□□ -0.36
CACNB3-210ENST00000548874 CFC1BP0CG36 223 aa12.81□□□□□ -0.36
CACNB3-210ENST00000548874 CFC1P0CG37 223 aa12.81□□□□□ -0.36
CACNB3-210ENST00000548874 PRLHP81277 87 aa12.81□□□□□ -0.36
CACNB3-210ENST00000548874 PKHD1L1Q86WI1 4243 aa12.81□□□□□ -0.36
CACNB3-210ENST00000548874 A0A0B4J2C4 111 aa12.8□□□□□ -0.36
CACNB3-210ENST00000548874 TMEM238LA0A1B0GVL6 79 aa12.8□□□□□ -0.36
CACNB3-210ENST00000548874 ETDCA0A1B0GVM5 59 aa12.8□□□□□ -0.36
CACNB3-210ENST00000548874 A6NJY4 79 aa12.8□□□□□ -0.36
CACNB3-210ENST00000548874 B5MCH6 92 aa12.78□□□□□ -0.36
CACNB3-210ENST00000548874 DIRC1Q969H9 104 aa12.78□□□□□ -0.36
CACNB3-210ENST00000548874 RPL13AP40429 203 aaKnown RBP12.76□□□□□ -0.37
CACNB3-210ENST00000548874 SMIM11BQ8TCY0 68 aa12.76□□□□□ -0.37
CACNB3-210ENST00000548874 CTAG1AP78358 180 aa12.75□□□□□ -0.37
CACNB3-210ENST00000548874 C6orf99Q4VX62 202 aa12.75□□□□□ -0.37
CACNB3-210ENST00000548874 Q6ZRX8 168 aa12.75□□□□□ -0.37
CACNB3-210ENST00000548874 RAB37Q96AX2 223 aa12.75□□□□□ -0.37
CACNB3-210ENST00000548874 BVES-AS1Q5T3Y7 98 aa12.74□□□□□ -0.37
CACNB3-210ENST00000548874 TRBV7-6A0A0J9YX20 115 aa12.72□□□□□ -0.37
CACNB3-210ENST00000548874 A0A1B0GWB2 263 aa12.72□□□□□ -0.37
CACNB3-210ENST00000548874 HINT1P49773 126 aaPredicted RBP12.72□□□□□ -0.37
CACNB3-210ENST00000548874 FLG2Q5D862 2391 aaPredicted RBP12.72□□□□□ -0.37
CACNB3-210ENST00000548874 ELOF1P60002 83 aaKnown RBP12.71□□□□□ -0.37
CACNB3-210ENST00000548874 SMCR5Q8TEV8 140 aa12.71□□□□□ -0.37
CACNB3-210ENST00000548874 Q9BRP9 147 aa12.71□□□□□ -0.37
CACNB3-210ENST00000548874 HIGD2AQ9BW72 106 aa12.71□□□□□ -0.37
CACNB3-210ENST00000548874 NHP2Q9NX24 153 aaKnown RBP12.71□□□□□ -0.37
CACNB3-210ENST00000548874 PRO1854Q9UHT4 67 aa12.7□□□□□ -0.38
CACNB3-210ENST00000548874 COX7BP24311 80 aa12.69□□□□□ -0.38
CACNB3-210ENST00000548874 PCLOQ9Y6V0 5065 aa12.68□□□□□ -0.38
CACNB3-210ENST00000548874 M0R143 59 aa12.68□□□□□ -0.38
CACNB3-210ENST00000548874 K7ERJ3 54 aa12.67□□□□□ -0.38
CACNB3-210ENST00000548874 KRTAP1-4P0C5Y4 121 aa12.67□□□□□ -0.38
CACNB3-210ENST00000548874 H7C2G1 150 aa12.66□□□□□ -0.38
CACNB3-210ENST00000548874 ERC2-IT1O76042 136 aa12.65□□□□□ -0.38
CACNB3-210ENST00000548874 DHRS4-AS1Q9P1J3 65 aa12.63□□□□□ -0.39
CACNB3-210ENST00000548874 MYCBP2O75592 4640 aa12.62□□□□□ -0.39
CACNB3-210ENST00000548874 OXTP01178 125 aa12.62□□□□□ -0.39
CACNB3-210ENST00000548874 VAMP3Q15836 100 aa12.62□□□□□ -0.39
CACNB3-210ENST00000548874 KRTAP29-1A8MX34 341 aaPredicted RBP12.61□□□□□ -0.39
CACNB3-210ENST00000548874 Q1RN00 199 aa12.61□□□□□ -0.39
CACNB3-210ENST00000548874 LINC01600Q96MT4 127 aa12.61□□□□□ -0.39
CACNB3-210ENST00000548874 SPRR4Q96PI1 79 aa12.6□□□□□ -0.39
CACNB3-210ENST00000548874 ZNF706Q9Y5V0 76 aaPredicted RBP12.59□□□□□ -0.39
CACNB3-210ENST00000548874 LRP1Q07954 4544 aaKnown RBP12.59□□□□□ -0.39
CACNB3-210ENST00000548874 FAT3Q8TDW7 4589 aa12.59□□□□□ -0.39
CACNB3-210ENST00000548874 TSPAN13O95857 204 aa12.57□□□□□ -0.4
CACNB3-210ENST00000548874 LINC00575Q6W349 94 aa12.57□□□□□ -0.4
CACNB3-210ENST00000548874 TRIAP1O43715 76 aa12.55□□□□□ -0.4
CACNB3-210ENST00000548874 H0YGX0 51 aa12.54□□□□□ -0.4
CACNB3-210ENST00000548874 FAM229BQ4G0N7 80 aa12.54□□□□□ -0.4
CACNB3-210ENST00000548874 LINC00483Q53H64 154 aa12.54□□□□□ -0.4
CACNB3-210ENST00000548874 ST20-AS1Q8NBB2 130 aa12.54□□□□□ -0.4
CACNB3-210ENST00000548874 ANAPC11Q9NYG5 84 aa12.54□□□□□ -0.4
CACNB3-210ENST00000548874 MT1HL1P0DM35 61 aa12.53□□□□□ -0.4
CACNB3-210ENST00000548874 BATFQ16520 125 aa12.52□□□□□ -0.41
CACNB3-210ENST00000548874 PRR26Q8N8Z3 221 aa12.52□□□□□ -0.41
CACNB3-210ENST00000548874 A0A087X002 238 aa12.51□□□□□ -0.41
CACNB3-210ENST00000548874 SLC25A20O43772 301 aa12.51□□□□□ -0.41
CACNB3-210ENST00000548874 KRTAP10-8P60410 259 aa12.51□□□□□ -0.41
CACNB3-210ENST00000548874 GAGE2AQ6NT46 116 aa12.51□□□□□ -0.41
CACNB3-210ENST00000548874 hADV29S1A0JD25 119 aa12.5□□□□□ -0.41
CACNB3-210ENST00000548874 CRYGAP11844 174 aa12.49□□□□□ -0.41
CACNB3-210ENST00000548874 PSMB2P49721 201 aa12.49□□□□□ -0.41
CACNB3-210ENST00000548874 FAM218AQ96MZ4 157 aa12.49□□□□□ -0.41
CACNB3-210ENST00000548874 SPRR1BP22528 89 aa12.48□□□□□ -0.41
CACNB3-210ENST00000548874 IGLV5-48A0A075B6I7 105 aa12.46□□□□□ -0.41
CACNB3-210ENST00000548874 COX6CP09669 75 aa12.46□□□□□ -0.41
CACNB3-210ENST00000548874 LINC01547P58512 204 aaPredicted RBP12.46□□□□□ -0.41
CACNB3-210ENST00000548874 KRTAP13-2Q52LG2 175 aa12.46□□□□□ -0.41
CACNB3-210ENST00000548874 J3QL48 77 aa12.45□□□□□ -0.42
CACNB3-210ENST00000548874 SNHG12Q9BXW3 62 aa12.45□□□□□ -0.42
CACNB3-210ENST00000548874 A0A1B0GX51 115 aa12.44□□□□□ -0.42
CACNB3-210ENST00000548874 Q6ZQY7 126 aa12.44□□□□□ -0.42
CACNB3-210ENST00000548874 PCP4L1A6NKN8 68 aa12.43□□□□□ -0.42
CACNB3-210ENST00000548874 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP12.43□□□□□ -0.42
CACNB3-210ENST00000548874 CLEC2BQ92478 149 aa12.43□□□□□ -0.42
CACNB3-210ENST00000548874 TEX49A0A1B0GTD5 131 aa12.42□□□□□ -0.42
CACNB3-210ENST00000548874 TNXBP22105 4242 aa12.41□□□□□ -0.42
CACNB3-210ENST00000548874 C3orf22Q8N5N4 141 aa12.41□□□□□ -0.42
CACNB3-210ENST00000548874 DEFB105AQ8NG35 78 aa12.41□□□□□ -0.42
CACNB3-210ENST00000548874 SNCGO76070 127 aa12.4□□□□□ -0.42
CACNB3-210ENST00000548874 Q8N377 158 aa12.4□□□□□ -0.42
CACNB3-210ENST00000548874 NAA38Q9BRA0 125 aaKnown RBP12.4□□□□□ -0.42
CACNB3-210ENST00000548874 TYMSOSQ8TAI1 123 aa12.39□□□□□ -0.43
CACNB3-210ENST00000548874 TAX1BP3O14907 124 aa12.38□□□□□ -0.43
CACNB3-210ENST00000548874 SCGB1C2P0DMR2 95 aa12.38□□□□□ -0.43
CACNB3-210ENST00000548874 SMIM29Q86T20 159 aa12.37□□□□□ -0.43
CACNB3-210ENST00000548874 DMBT1Q9UGM3 2413 aaPredicted RBP12.37□□□□□ -0.43
CACNB3-210ENST00000548874 LST1O00453 97 aa12.35□□□□□ -0.43
CACNB3-210ENST00000548874 LAMTOR3Q9UHA4 124 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms