RNA–Protein interactions for RNA: ENST00000548122.2

PTPRB-206, Transcript of protein tyrosine phosphatase, receptor type B, humanhuman

TSL 2

Gene PTPRB, Length 4,237 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRB-206ENST00000548122 UBE2D1P51668 147 aa3.86□□□□□ -1.79
PTPRB-206ENST00000548122 LINC00158P58513 81 aa3.86□□□□□ -1.79
PTPRB-206ENST00000548122 CNFNQ9BYD5 112 aa3.86□□□□□ -1.79
PTPRB-206ENST00000548122 STAB2Q8WWQ8 2551 aa3.86□□□□□ -1.79
PTPRB-206ENST00000548122 IGLV8-61A0A075B6I0 122 aa3.86□□□□□ -1.79
PTPRB-206ENST00000548122 A0A1B0GW54 56 aa3.86□□□□□ -1.79
PTPRB-206ENST00000548122 MUC4Q99102 2169 aa3.85□□□□□ -1.79
PTPRB-206ENST00000548122 FAM19A4Q96LR4 140 aa3.85□□□□□ -1.79
PTPRB-206ENST00000548122 TRBV6-5A0A0K0K1A5 114 aa3.85□□□□□ -1.79
PTPRB-206ENST00000548122 HIGD2AQ9BW72 106 aa3.85□□□□□ -1.79
PTPRB-206ENST00000548122 SNURFQ9Y675 71 aa3.85□□□□□ -1.79
PTPRB-206ENST00000548122 TRBV7-7A0A0K0K1E9 115 aa3.85□□□□□ -1.79
PTPRB-206ENST00000548122 LRCOL1A6NCL2 159 aa3.85□□□□□ -1.79
PTPRB-206ENST00000548122 ATP5EP2Q5VTU8 51 aa3.85□□□□□ -1.79
PTPRB-206ENST00000548122 C11orf21Q9P2W6 132 aa3.84□□□□□ -1.79
PTPRB-206ENST00000548122 TGP01266 2768 aa3.84□□□□□ -1.79
PTPRB-206ENST00000548122 C6orf223Q8N319 242 aa3.84□□□□□ -1.79
PTPRB-206ENST00000548122 APLNQ9ULZ1 77 aa3.84□□□□□ -1.79
PTPRB-206ENST00000548122 A8MTW9 85 aa3.84□□□□□ -1.79
PTPRB-206ENST00000548122 LELP1Q5T871 98 aa3.84□□□□□ -1.79
PTPRB-206ENST00000548122 C11orf72Q8NBR9 251 aa3.84□□□□□ -1.79
PTPRB-206ENST00000548122 NBDYA0A0U1RRE5 68 aa3.84□□□□□ -1.8
PTPRB-206ENST00000548122 C20orf203Q8NBC4 194 aa3.84□□□□□ -1.8
PTPRB-206ENST00000548122 VWFP04275 2813 aa3.83□□□□□ -1.8
PTPRB-206ENST00000548122 IGLV10-54A0A075B6I4 117 aa3.83□□□□□ -1.8
PTPRB-206ENST00000548122 TRBV30A0A0K0K1B3 111 aa3.83□□□□□ -1.8
PTPRB-206ENST00000548122 C9orf116Q5BN46 136 aaPredicted RBP3.83□□□□□ -1.8
PTPRB-206ENST00000548122 PRR15Q8IV56 129 aa3.83□□□□□ -1.8
PTPRB-206ENST00000548122 IGLV7-43P04211 117 aa3.83□□□□□ -1.8
PTPRB-206ENST00000548122 PRR3P79522 188 aaKnown RBP3.83□□□□□ -1.8
PTPRB-206ENST00000548122 LYPD5Q6UWN5 251 aa3.83□□□□□ -1.8
PTPRB-206ENST00000548122 SVEP1Q4LDE5 3571 aa3.83□□□□□ -1.8
PTPRB-206ENST00000548122 IGLV2-33A0A075B6J2 118 aaPredicted RBP3.83□□□□□ -1.8
PTPRB-206ENST00000548122 H3BPC8 53 aa3.83□□□□□ -1.8
PTPRB-206ENST00000548122 LINC00588Q9Y4M8 146 aa3.83□□□□□ -1.8
PTPRB-206ENST00000548122 H3BNG1 76 aa3.82□□□□□ -1.8
PTPRB-206ENST00000548122 M0R378 163 aa3.82□□□□□ -1.8
PTPRB-206ENST00000548122 Q75L30 129 aa3.82□□□□□ -1.8
PTPRB-206ENST00000548122 LECT2O14960 151 aa3.82□□□□□ -1.8
PTPRB-206ENST00000548122 C14orf177Q52M58 125 aa3.82□□□□□ -1.8
PTPRB-206ENST00000548122 WFDC10BQ8IUB3 73 aa3.82□□□□□ -1.8
PTPRB-206ENST00000548122 C16orf90A8MZG2 172 aa3.82□□□□□ -1.8
PTPRB-206ENST00000548122 IGKV2D-29A0A075B6S2 120 aaPredicted RBP3.81□□□□□ -1.8
PTPRB-206ENST00000548122 TRAV7A0A075B6U4 112 aa3.81□□□□□ -1.8
PTPRB-206ENST00000548122 IGKV2-29A2NJV5 120 aaPredicted RBP3.81□□□□□ -1.8
PTPRB-206ENST00000548122 H3BQ85 93 aa3.81□□□□□ -1.8
PTPRB-206ENST00000548122 CCKP06307 115 aa3.81□□□□□ -1.8
PTPRB-206ENST00000548122 XCL1P47992 114 aa3.81□□□□□ -1.8
PTPRB-206ENST00000548122 PLA2G1BP04054 148 aaKnown RBP3.81□□□□□ -1.8
PTPRB-206ENST00000548122 Q8NBF4 154 aa3.81□□□□□ -1.8
PTPRB-206ENST00000548122 TRBV6-8A0A0A6YYG3 113 aa3.81□□□□□ -1.8
PTPRB-206ENST00000548122 SND1-IT1Q9HBX3 110 aa3.8□□□□□ -1.8
PTPRB-206ENST00000548122 PKD1L1Q8TDX9 2849 aa3.8□□□□□ -1.8
PTPRB-206ENST00000548122 A0A087WVE0 104 aa3.8□□□□□ -1.8
PTPRB-206ENST00000548122 M0QY20 66 aa3.8□□□□□ -1.8
PTPRB-206ENST00000548122 LINC00315P59091 139 aa3.8□□□□□ -1.8
PTPRB-206ENST00000548122 CHCHD7Q9BUK0 85 aa3.8□□□□□ -1.8
PTPRB-206ENST00000548122 IGLV5-52A0A0A0MRZ9 124 aa3.79□□□□□ -1.8
PTPRB-206ENST00000548122 FP248Q71RG6 208 aaPredicted RBP3.79□□□□□ -1.8
PTPRB-206ENST00000548122 CYP4F30PQ9H0H9 118 aa3.79□□□□□ -1.8
PTPRB-206ENST00000548122 IGLV4-69A0A075B6H9 119 aa3.78□□□□□ -1.8
PTPRB-206ENST00000548122 COX7B2Q8TF08 81 aa3.78□□□□□ -1.8
PTPRB-206ENST00000548122 CHCHD10Q8WYQ3 142 aaPredicted RBP3.78□□□□□ -1.8
PTPRB-206ENST00000548122 NDUFA1O15239 70 aa3.78□□□□□ -1.81
PTPRB-206ENST00000548122 POLR2KP53803 58 aaKnown RBP3.78□□□□□ -1.81
PTPRB-206ENST00000548122 DIRC1Q969H9 104 aa3.78□□□□□ -1.81
PTPRB-206ENST00000548122 TENM3Q9P273 2699 aa3.77□□□□□ -1.81
PTPRB-206ENST00000548122 LINC01546A6NGU7 62 aa3.77□□□□□ -1.81
PTPRB-206ENST00000548122 Q9BRP9 147 aa3.77□□□□□ -1.81
PTPRB-206ENST00000548122 LCE2BO14633 110 aa3.77□□□□□ -1.81
PTPRB-206ENST00000548122 NCR3O14931 201 aa3.77□□□□□ -1.81
PTPRB-206ENST00000548122 SLPIP03973 132 aa3.77□□□□□ -1.81
PTPRB-206ENST00000548122 LINC00313P59037 77 aa3.77□□□□□ -1.81
PTPRB-206ENST00000548122 LINC01556Q5JQF7 62 aa3.77□□□□□ -1.81
PTPRB-206ENST00000548122 ENHOQ6UWT2 76 aa3.77□□□□□ -1.81
PTPRB-206ENST00000548122 Q6ZSN1 163 aa3.77□□□□□ -1.81
PTPRB-206ENST00000548122 CDC42SE1Q9NRR8 79 aa3.77□□□□□ -1.81
PTPRB-206ENST00000548122 LINC01547P58512 204 aaPredicted RBP3.77□□□□□ -1.81
PTPRB-206ENST00000548122 LINC00612Q8N6U2 182 aa3.77□□□□□ -1.81
PTPRB-206ENST00000548122 SMCR5Q8TEV8 140 aa3.77□□□□□ -1.81
PTPRB-206ENST00000548122 IGIPA6NJ69 53 aa3.76□□□□□ -1.81
PTPRB-206ENST00000548122 H0YGX0 51 aa3.76□□□□□ -1.81
PTPRB-206ENST00000548122 Q6ZRP5 223 aa3.76□□□□□ -1.81
PTPRB-206ENST00000548122 LINC00308Q8TCZ7 52 aa3.76□□□□□ -1.81
PTPRB-206ENST00000548122 ADAMTSL4-AS1Q5T5F5 129 aa3.76□□□□□ -1.81
PTPRB-206ENST00000548122 CDKN2A-AS1Q9UH64 79 aa3.76□□□□□ -1.81
PTPRB-206ENST00000548122 JMJD7-PLA2G4BH0Y9G9 81 aa3.75□□□□□ -1.81
PTPRB-206ENST00000548122 TRRAPQ9Y4A5 3859 aa3.75□□□□□ -1.81
PTPRB-206ENST00000548122 IGKV2-24A0A0C4DH68 120 aa3.75□□□□□ -1.81
PTPRB-206ENST00000548122 ACYP2P14621 99 aa3.75□□□□□ -1.81
PTPRB-206ENST00000548122 MIR7-3HGQ8N6C7 128 aa3.75□□□□□ -1.81
PTPRB-206ENST00000548122 TSHBP01222 138 aa3.75□□□□□ -1.81
PTPRB-206ENST00000548122 TENM2Q9NT68 2774 aa3.75□□□□□ -1.81
PTPRB-206ENST00000548122 Q8N9L7 120 aa3.74□□□□□ -1.81
PTPRB-206ENST00000548122 DNAH10OSP0CZ25 163 aa3.74□□□□□ -1.81
PTPRB-206ENST00000548122 NREPQ16612 68 aa3.74□□□□□ -1.81
PTPRB-206ENST00000548122 ZNF575Q86XF7 245 aa3.74□□□□□ -1.81
PTPRB-206ENST00000548122 CUBNO60494 3623 aa3.74□□□□□ -1.81
PTPRB-206ENST00000548122 IBA57-AS1B1ANH7 110 aa3.74□□□□□ -1.81
PTPRB-206ENST00000548122 DNHD1Q96M86 4753 aa3.73□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms