RNA–Protein interactions for RNA: ENST00000547562.5

BRF1-212, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 2

Gene BRF1, Length 2,405 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-212ENST00000547562 RMI2Q96E14 147 aa10.1□□□□□ -0.79
BRF1-212ENST00000547562 DNAH1Q9P2D7 4330 aa10.09□□□□□ -0.79
BRF1-212ENST00000547562 TRBV7-4A0A0J9YYF1 115 aa10.09□□□□□ -0.79
BRF1-212ENST00000547562 UPK3BQ9BT76 320 aa10.09□□□□□ -0.79
BRF1-212ENST00000547562 PLA2G2DQ9UNK4 145 aa10.09□□□□□ -0.79
BRF1-212ENST00000547562 MGAM2Q2M2H8 2515 aa10.09□□□□□ -0.79
BRF1-212ENST00000547562 COX7CP15954 63 aa10.08□□□□□ -0.8
BRF1-212ENST00000547562 LOC107984640A0A0U1RRK4 108 aa10.07□□□□□ -0.8
BRF1-212ENST00000547562 C9orf153Q5TBE3 101 aa10.07□□□□□ -0.8
BRF1-212ENST00000547562 Q6ZVQ6 151 aa10.05□□□□□ -0.8
BRF1-212ENST00000547562 FAM19A1Q7Z5A9 133 aa10.05□□□□□ -0.8
BRF1-212ENST00000547562 IGLV5-37A0A075B6J1 123 aa10.05□□□□□ -0.8
BRF1-212ENST00000547562 FAM168BA1KXE4 195 aa10.04□□□□□ -0.8
BRF1-212ENST00000547562 LINC01547P58512 204 aaPredicted RBP10.03□□□□□ -0.8
BRF1-212ENST00000547562 STAB2Q8WWQ8 2551 aa10.02□□□□□ -0.8
BRF1-212ENST00000547562 RPL37AP8A6NKH3 93 aa10.02□□□□□ -0.81
BRF1-212ENST00000547562 SERP2Q8N6R1 65 aa10.02□□□□□ -0.81
BRF1-212ENST00000547562 IGLV1-50A0A075B6I6 118 aa10.02□□□□□ -0.81
BRF1-212ENST00000547562 PRYO14603 147 aa10.01□□□□□ -0.81
BRF1-212ENST00000547562 HAMPP81172 84 aa10.01□□□□□ -0.81
BRF1-212ENST00000547562 COL7A1Q02388 2944 aa10.01□□□□□ -0.81
BRF1-212ENST00000547562 KRTAP7-1Q8IUC3 87 aa10.01□□□□□ -0.81
BRF1-212ENST00000547562 KRTAP4-16G5E9R7 235 aaPredicted RBP10.01□□□□□ -0.81
BRF1-212ENST00000547562 CRYGAP11844 174 aa10□□□□□ -0.81
BRF1-212ENST00000547562 Q6ZRX8 168 aa10□□□□□ -0.81
BRF1-212ENST00000547562 SPRR1AP35321 89 aa9.99□□□□□ -0.81
BRF1-212ENST00000547562 DHRS4-AS1Q9P1J3 65 aa9.99□□□□□ -0.81
BRF1-212ENST00000547562 CXCL6P80162 114 aa9.98□□□□□ -0.81
BRF1-212ENST00000547562 Q8N377 158 aa9.98□□□□□ -0.81
BRF1-212ENST00000547562 CYSTM1Q9H1C7 97 aa9.98□□□□□ -0.81
BRF1-212ENST00000547562 MRPL55Q7Z7F7 128 aaKnown RBP9.97□□□□□ -0.81
BRF1-212ENST00000547562 DEFB105AQ8NG35 78 aa9.97□□□□□ -0.81
BRF1-212ENST00000547562 ETDCA0A1B0GVM5 59 aa9.97□□□□□ -0.81
BRF1-212ENST00000547562 FAM19A5Q7Z5A7 132 aaPredicted RBP9.97□□□□□ -0.81
BRF1-212ENST00000547562 Q9BRP9 147 aa9.97□□□□□ -0.81
BRF1-212ENST00000547562 KRTAP1-5Q9BYS1 174 aa9.97□□□□□ -0.81
BRF1-212ENST00000547562 LYSTQ99698 3801 aa9.95□□□□□ -0.82
BRF1-212ENST00000547562 IGLV5-48A0A075B6I7 105 aa9.93□□□□□ -0.82
BRF1-212ENST00000547562 J3KT08 172 aa9.92□□□□□ -0.82
BRF1-212ENST00000547562 DNAH9Q9NYC9 4486 aa9.92□□□□□ -0.82
BRF1-212ENST00000547562 APLNQ9ULZ1 77 aa9.92□□□□□ -0.82
BRF1-212ENST00000547562 DNAH10Q8IVF4 4471 aa9.91□□□□□ -0.82
BRF1-212ENST00000547562 UBE2DNLQ8IWF7 75 aa9.91□□□□□ -0.82
BRF1-212ENST00000547562 CNBPP62633 177 aaKnown RBP9.91□□□□□ -0.82
BRF1-212ENST00000547562 C5orf47Q569G3 176 aa9.91□□□□□ -0.82
BRF1-212ENST00000547562 SCXQ7RTU7 201 aa9.91□□□□□ -0.82
BRF1-212ENST00000547562 PSCAO43653 123 aa9.9□□□□□ -0.82
BRF1-212ENST00000547562 ST20-AS1Q8NBB2 130 aa9.9□□□□□ -0.83
BRF1-212ENST00000547562 A0A096LNI7 61 aa9.89□□□□□ -0.83
BRF1-212ENST00000547562 BCE1O60756 84 aa9.89□□□□□ -0.83
BRF1-212ENST00000547562 REG3GQ6UW15 175 aa9.89□□□□□ -0.83
BRF1-212ENST00000547562 C16orf90A8MZG2 172 aa9.88□□□□□ -0.83
BRF1-212ENST00000547562 ERC2-IT1O76042 136 aa9.88□□□□□ -0.83
BRF1-212ENST00000547562 UBE2BP63146 152 aa9.87□□□□□ -0.83
BRF1-212ENST00000547562 TNP2Q05952 138 aa9.87□□□□□ -0.83
BRF1-212ENST00000547562 B9D2Q9BPU9 175 aa9.87□□□□□ -0.83
BRF1-212ENST00000547562 C3orf84H3BNL1 204 aa9.86□□□□□ -0.83
BRF1-212ENST00000547562 NREPQ16612 68 aa9.86□□□□□ -0.83
BRF1-212ENST00000547562 DYNC2H1Q8NCM8 4307 aaKnown RBP9.86□□□□□ -0.83
BRF1-212ENST00000547562 IGKV2-24A0A0C4DH68 120 aa9.86□□□□□ -0.83
BRF1-212ENST00000547562 MDFIQ99750 246 aa9.86□□□□□ -0.83
BRF1-212ENST00000547562 OXTP01178 125 aa9.85□□□□□ -0.83
BRF1-212ENST00000547562 RPS28P62857 69 aaKnown RBP9.85□□□□□ -0.83
BRF1-212ENST00000547562 TENM2Q9NT68 2774 aa9.85□□□□□ -0.83
BRF1-212ENST00000547562 CSMD3Q7Z407 3707 aa9.84□□□□□ -0.83
BRF1-212ENST00000547562 TRAV7A0A075B6U4 112 aa9.84□□□□□ -0.83
BRF1-212ENST00000547562 A0A1W2PNN7 141 aa9.84□□□□□ -0.83
BRF1-212ENST00000547562 FUSP35637 526 aaKnown RBP eCLIP9.84□□□□□ -0.83
BRF1-212ENST00000547562 C14orf177Q52M58 125 aa9.84□□□□□ -0.83
BRF1-212ENST00000547562 C1orf137Q5JT78 98 aa9.84□□□□□ -0.83
BRF1-212ENST00000547562 A0A1B0GW54 56 aa9.83□□□□□ -0.84
BRF1-212ENST00000547562 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.83□□□□□ -0.84
BRF1-212ENST00000547562 A0A1W2PNM2 257 aa9.83□□□□□ -0.84
BRF1-212ENST00000547562 DPH3Q96FX2 82 aa9.83□□□□□ -0.84
BRF1-212ENST00000547562 TMEM258P61165 79 aa9.82□□□□□ -0.84
BRF1-212ENST00000547562 DNAH7Q8WXX0 4024 aa9.81□□□□□ -0.84
BRF1-212ENST00000547562 BPY2O14599 106 aa9.8□□□□□ -0.84
BRF1-212ENST00000547562 Q8NBF4 154 aa9.8□□□□□ -0.84
BRF1-212ENST00000547562 IGKV4-1P06312 121 aa9.8□□□□□ -0.84
BRF1-212ENST00000547562 C20orf197Q8N268 126 aa9.8□□□□□ -0.84
BRF1-212ENST00000547562 Q8N9L7 120 aa9.8□□□□□ -0.84
BRF1-212ENST00000547562 SMIM29Q86T20 159 aa9.78□□□□□ -0.84
BRF1-212ENST00000547562 SPRR4Q96PI1 79 aa9.78□□□□□ -0.84
BRF1-212ENST00000547562 PRLHP81277 87 aa9.77□□□□□ -0.84
BRF1-212ENST00000547562 NBDYA0A0U1RRE5 68 aa9.76□□□□□ -0.85
BRF1-212ENST00000547562 NUPR2A6NF83 97 aa9.76□□□□□ -0.85
BRF1-212ENST00000547562 CHTF8P0CG12 524 aa9.76□□□□□ -0.85
BRF1-212ENST00000547562 C4orf26Q17RF5 130 aa9.76□□□□□ -0.85
BRF1-212ENST00000547562 PLECQ15149 4684 aaKnown RBP9.76□□□□□ -0.85
BRF1-212ENST00000547562 LRCOL1A6NCL2 159 aa9.76□□□□□ -0.85
BRF1-212ENST00000547562 C9orf163Q8N9P6 203 aa9.75□□□□□ -0.85
BRF1-212ENST00000547562 F8WEM9 126 aa9.74□□□□□ -0.85
BRF1-212ENST00000547562 Q5XG85 94 aa9.74□□□□□ -0.85
BRF1-212ENST00000547562 PHF5AQ7RTV0 110 aaKnown RBP9.74□□□□□ -0.85
BRF1-212ENST00000547562 LINC00476Q8WZB0 136 aa9.74□□□□□ -0.85
BRF1-212ENST00000547562 HIGD2AQ9BW72 106 aa9.73□□□□□ -0.85
BRF1-212ENST00000547562 KLKP1Q107X0 134 aa9.72□□□□□ -0.85
BRF1-212ENST00000547562 Q6ZRN7 208 aaPredicted RBP9.72□□□□□ -0.85
BRF1-212ENST00000547562 KRTAP11-1Q8IUC1 163 aa9.72□□□□□ -0.85
BRF1-212ENST00000547562 HRCT1Q6UXD1 115 aa9.71□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 136.2 ms