RNA–Protein interactions for RNA: ENST00000547018.5

SCAF11-209, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 5

Gene SCAF11, Length 3,271 nt, Biotype non stop decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-209ENST00000547018 UBE2BP63146 152 aa8.27□□□□□ -1.09
SCAF11-209ENST00000547018 DSCR8Q96T75 97 aa8.27□□□□□ -1.09
SCAF11-209ENST00000547018 RMI2Q96E14 147 aa8.27□□□□□ -1.09
SCAF11-209ENST00000547018 J3KT08 172 aa8.26□□□□□ -1.09
SCAF11-209ENST00000547018 ACYP1P07311 99 aa8.26□□□□□ -1.09
SCAF11-209ENST00000547018 LINC00643Q86TS7 51 aa8.26□□□□□ -1.09
SCAF11-209ENST00000547018 PKIGQ9Y2B9 76 aa8.26□□□□□ -1.09
SCAF11-209ENST00000547018 DNAH3Q8TD57 4116 aa8.26□□□□□ -1.09
SCAF11-209ENST00000547018 FAM240AA0A1B0GVK7 77 aa8.26□□□□□ -1.09
SCAF11-209ENST00000547018 ETDCA0A1B0GVM5 59 aa8.25□□□□□ -1.09
SCAF11-209ENST00000547018 LINC00167Q96N53 147 aa8.25□□□□□ -1.09
SCAF11-209ENST00000547018 LINC01600Q96MT4 127 aa8.25□□□□□ -1.09
SCAF11-209ENST00000547018 DNAH9Q9NYC9 4486 aa8.24□□□□□ -1.09
SCAF11-209ENST00000547018 JMJD7-PLA2G4BH0Y9G9 81 aa8.24□□□□□ -1.09
SCAF11-209ENST00000547018 C9orf153Q5TBE3 101 aa8.24□□□□□ -1.09
SCAF11-209ENST00000547018 ST20-AS1Q8NBB2 130 aa8.24□□□□□ -1.09
SCAF11-209ENST00000547018 A0A0G2JQZ4 141 aa8.23□□□□□ -1.09
SCAF11-209ENST00000547018 A0A1W2PNN7 141 aa8.23□□□□□ -1.09
SCAF11-209ENST00000547018 DNAH7Q8WXX0 4024 aa8.23□□□□□ -1.09
SCAF11-209ENST00000547018 CCKP06307 115 aa8.23□□□□□ -1.09
SCAF11-209ENST00000547018 C3orf84H3BNL1 204 aa8.23□□□□□ -1.09
SCAF11-209ENST00000547018 HIGD2AQ9BW72 106 aa8.23□□□□□ -1.09
SCAF11-209ENST00000547018 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP8.22□□□□□ -1.09
SCAF11-209ENST00000547018 ELOF1P60002 83 aaKnown RBP8.22□□□□□ -1.09
SCAF11-209ENST00000547018 FAM19A1Q7Z5A9 133 aa8.22□□□□□ -1.09
SCAF11-209ENST00000547018 PRKDCP78527 4128 aaKnown RBP8.22□□□□□ -1.09
SCAF11-209ENST00000547018 A0A096LNI7 61 aa8.21□□□□□ -1.09
SCAF11-209ENST00000547018 PRLHP81277 87 aa8.21□□□□□ -1.09
SCAF11-209ENST00000547018 PLECQ15149 4684 aaKnown RBP8.21□□□□□ -1.09
SCAF11-209ENST00000547018 B9D2Q9BPU9 175 aa8.21□□□□□ -1.1
SCAF11-209ENST00000547018 UBL5Q9BZL1 73 aa8.2□□□□□ -1.1
SCAF11-209ENST00000547018 APLNQ9ULZ1 77 aa8.2□□□□□ -1.1
SCAF11-209ENST00000547018 FBN3Q75N90 2809 aa8.19□□□□□ -1.1
SCAF11-209ENST00000547018 MRPL55Q7Z7F7 128 aaKnown RBP8.19□□□□□ -1.1
SCAF11-209ENST00000547018 A0A1B0GX51 115 aa8.18□□□□□ -1.1
SCAF11-209ENST00000547018 ERC2-IT1O76042 136 aa8.18□□□□□ -1.1
SCAF11-209ENST00000547018 LINC00528Q8N1L1 170 aa8.18□□□□□ -1.1
SCAF11-209ENST00000547018 MUC7Q8TAX7 377 aa8.18□□□□□ -1.1
SCAF11-209ENST00000547018 KRTAP7-1Q8IUC3 87 aa8.18□□□□□ -1.1
SCAF11-209ENST00000547018 Q8N9L7 120 aa8.17□□□□□ -1.1
SCAF11-209ENST00000547018 PHF5AQ7RTV0 110 aaKnown RBP8.16□□□□□ -1.1
SCAF11-209ENST00000547018 OBSCN-AS1Q96MR7 158 aa8.16□□□□□ -1.1
SCAF11-209ENST00000547018 Q6ZQT0 140 aa8.16□□□□□ -1.1
SCAF11-209ENST00000547018 Q6Q795 121 aa8.15□□□□□ -1.1
SCAF11-209ENST00000547018 TRBV7-7A0A0K0K1E9 115 aa8.14□□□□□ -1.11
SCAF11-209ENST00000547018 Q9BRP9 147 aa8.14□□□□□ -1.11
SCAF11-209ENST00000547018 IGLV1-50A0A075B6I6 118 aa8.13□□□□□ -1.11
SCAF11-209ENST00000547018 UPK3BQ9BT76 320 aa8.13□□□□□ -1.11
SCAF11-209ENST00000547018 NBDYA0A0U1RRE5 68 aa8.12□□□□□ -1.11
SCAF11-209ENST00000547018 OXTP01178 125 aa8.12□□□□□ -1.11
SCAF11-209ENST00000547018 KCNQ1DNQ9H478 68 aa8.12□□□□□ -1.11
SCAF11-209ENST00000547018 Q8N377 158 aa8.12□□□□□ -1.11
SCAF11-209ENST00000547018 STARD9Q9P2P6 4700 aa8.12□□□□□ -1.11
SCAF11-209ENST00000547018 LY6G6CO95867 125 aa8.12□□□□□ -1.11
SCAF11-209ENST00000547018 Q6ZVQ6 151 aa8.12□□□□□ -1.11
SCAF11-209ENST00000547018 Q6ZRX8 168 aa8.11□□□□□ -1.11
SCAF11-209ENST00000547018 LINC00336Q6ZUF6 198 aa8.11□□□□□ -1.11
SCAF11-209ENST00000547018 REG3GQ6UW15 175 aa8.11□□□□□ -1.11
SCAF11-209ENST00000547018 V9GYY9 64 aa8.11□□□□□ -1.11
SCAF11-209ENST00000547018 Q5XG85 94 aa8.11□□□□□ -1.11
SCAF11-209ENST00000547018 PANO1I0J062 215 aa8.1□□□□□ -1.11
SCAF11-209ENST00000547018 DEFB116Q30KQ4 102 aa8.1□□□□□ -1.11
SCAF11-209ENST00000547018 CYSTM1Q9H1C7 97 aa8.1□□□□□ -1.11
SCAF11-209ENST00000547018 Q6JHZ5 121 aa8.09□□□□□ -1.11
SCAF11-209ENST00000547018 NUPR2A6NF83 97 aa8.09□□□□□ -1.11
SCAF11-209ENST00000547018 RPS28P62857 69 aaKnown RBP8.09□□□□□ -1.11
SCAF11-209ENST00000547018 FAM236DA0A1B0GTK5 79 aa8.09□□□□□ -1.11
SCAF11-209ENST00000547018 FAM236CP0DP71 79 aa8.09□□□□□ -1.11
SCAF11-209ENST00000547018 A0A0U1RQV1 116 aa8.08□□□□□ -1.12
SCAF11-209ENST00000547018 KRTAP11-1Q8IUC1 163 aa8.08□□□□□ -1.12
SCAF11-209ENST00000547018 PRO0628Q9UI54 55 aa8.08□□□□□ -1.12
SCAF11-209ENST00000547018 UQCRQO14949 82 aa8.08□□□□□ -1.12
SCAF11-209ENST00000547018 LINC01547P58512 204 aaPredicted RBP8.08□□□□□ -1.12
SCAF11-209ENST00000547018 TLX1NBP0CAT3 122 aa8.07□□□□□ -1.12
SCAF11-209ENST00000547018 NREPQ16612 68 aa8.07□□□□□ -1.12
SCAF11-209ENST00000547018 GHRHP01286 108 aa8.06□□□□□ -1.12
SCAF11-209ENST00000547018 IMUPQ9GZP8 106 aa8.06□□□□□ -1.12
SCAF11-209ENST00000547018 C16orf90A8MZG2 172 aa8.06□□□□□ -1.12
SCAF11-209ENST00000547018 KMT2AQ03164 3969 aa8.06□□□□□ -1.12
SCAF11-209ENST00000547018 UBE2AP49459 152 aa8.05□□□□□ -1.12
SCAF11-209ENST00000547018 C1orf137Q5JT78 98 aa8.05□□□□□ -1.12
SCAF11-209ENST00000547018 DHRS4-AS1Q9P1J3 65 aa8.05□□□□□ -1.12
SCAF11-209ENST00000547018 PRYO14603 147 aa8.04□□□□□ -1.12
SCAF11-209ENST00000547018 BPY2O14599 106 aa8.04□□□□□ -1.12
SCAF11-209ENST00000547018 TRBV7-4A0A0J9YYF1 115 aa8.04□□□□□ -1.12
SCAF11-209ENST00000547018 F8WEM9 126 aa8.03□□□□□ -1.12
SCAF11-209ENST00000547018 DNAH1Q9P2D7 4330 aa8.03□□□□□ -1.12
SCAF11-209ENST00000547018 LOC110117498A0A087WWA1 95 aa8.03□□□□□ -1.12
SCAF11-209ENST00000547018 TRBV7-6A0A0J9YX20 115 aa8.03□□□□□ -1.12
SCAF11-209ENST00000547018 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.02□□□□□ -1.13
SCAF11-209ENST00000547018 C14orf177Q52M58 125 aa8.01□□□□□ -1.13
SCAF11-209ENST00000547018 EPM2AB3EWF7 344 aa8.01□□□□□ -1.13
SCAF11-209ENST00000547018 ATOX1O00244 68 aa8.01□□□□□ -1.13
SCAF11-209ENST00000547018 LRCOL1A6NCL2 159 aa8□□□□□ -1.13
SCAF11-209ENST00000547018 KRTAP4-16G5E9R7 235 aaPredicted RBP8□□□□□ -1.13
SCAF11-209ENST00000547018 PDE6GP18545 87 aa8□□□□□ -1.13
SCAF11-209ENST00000547018 C9orf163Q8N9P6 203 aa8□□□□□ -1.13
SCAF11-209ENST00000547018 COX7CP15954 63 aa7.99□□□□□ -1.13
SCAF11-209ENST00000547018 C20orf197Q8N268 126 aa7.99□□□□□ -1.13
SCAF11-209ENST00000547018 A0A1W2PNM2 257 aa7.98□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 65.6 ms