RNA–Protein interactions for RNA: ENST00000546433.5

SSH1-203, Transcript of slingshot protein phosphatase 1, humanhuman

TSL 5

Gene SSH1, Length 5,621 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-203ENST00000546433 LCE6AA0A183 80 aa6.95□□□□□ -1.3
SSH1-203ENST00000546433 A8MWP4 228 aa6.94□□□□□ -1.3
SSH1-203ENST00000546433 HECTD1Q9ULT8 2610 aa6.94□□□□□ -1.3
SSH1-203ENST00000546433 IGLV1-50A0A075B6I6 118 aa6.94□□□□□ -1.3
SSH1-203ENST00000546433 WIPF1O43516 503 aa6.93□□□□□ -1.3
SSH1-203ENST00000546433 UNC80Q8N2C7 3258 aa6.93□□□□□ -1.3
SSH1-203ENST00000546433 MAST4O15021 2626 aa6.93□□□□□ -1.3
SSH1-203ENST00000546433 PRR34Q9NV39 138 aa6.92□□□□□ -1.3
SSH1-203ENST00000546433 ANKRD17O75179 2603 aaKnown RBP6.92□□□□□ -1.3
SSH1-203ENST00000546433 LINC00528Q8N1L1 170 aa6.91□□□□□ -1.3
SSH1-203ENST00000546433 CHTF8P0CG12 524 aa6.9□□□□□ -1.3
SSH1-203ENST00000546433 LINC00612Q8N6U2 182 aa6.9□□□□□ -1.3
SSH1-203ENST00000546433 SPAG11AQ6PDA7 123 aa6.89□□□□□ -1.31
SSH1-203ENST00000546433 MRPL34Q9BQ48 92 aaKnown RBP6.89□□□□□ -1.31
SSH1-203ENST00000546433 PLA2G2DQ9UNK4 145 aa6.89□□□□□ -1.31
SSH1-203ENST00000546433 MUC4Q99102 2169 aa6.88□□□□□ -1.31
SSH1-203ENST00000546433 RANBP2P49792 3224 aaKnown RBP6.88□□□□□ -1.31
SSH1-203ENST00000546433 TLX1NBP0CAT3 122 aa6.88□□□□□ -1.31
SSH1-203ENST00000546433 FAM168BA1KXE4 195 aa6.87□□□□□ -1.31
SSH1-203ENST00000546433 SETXQ7Z333 2677 aaKnown RBP6.86□□□□□ -1.31
SSH1-203ENST00000546433 A0A087WTM6 91 aa6.86□□□□□ -1.31
SSH1-203ENST00000546433 K7EQZ3 153 aa6.86□□□□□ -1.31
SSH1-203ENST00000546433 C15orf56Q8N910 161 aa6.86□□□□□ -1.31
SSH1-203ENST00000546433 MGAM2Q2M2H8 2515 aa6.86□□□□□ -1.31
SSH1-203ENST00000546433 Q96NJ1 140 aa6.86□□□□□ -1.31
SSH1-203ENST00000546433 XIRP2A4UGR9 3374 aa6.85□□□□□ -1.31
SSH1-203ENST00000546433 C4orf26Q17RF5 130 aa6.85□□□□□ -1.31
SSH1-203ENST00000546433 ATP11AUNQ6ZP68 121 aa6.84□□□□□ -1.31
SSH1-203ENST00000546433 GIG44P09565 113 aaPredicted RBP6.84□□□□□ -1.31
SSH1-203ENST00000546433 SPINT4Q6UDR6 99 aa6.84□□□□□ -1.31
SSH1-203ENST00000546433 IGFL1Q6UW32 110 aa6.84□□□□□ -1.31
SSH1-203ENST00000546433 SSBP3-AS1Q7Z2R9 100 aa6.84□□□□□ -1.31
SSH1-203ENST00000546433 CHD9Q3L8U1 2897 aa6.84□□□□□ -1.31
SSH1-203ENST00000546433 TRANK1O15050 2925 aa6.84□□□□□ -1.31
SSH1-203ENST00000546433 CYP4F30PQ9H0H9 118 aa6.84□□□□□ -1.32
SSH1-203ENST00000546433 PRR15Q8IV56 129 aa6.82□□□□□ -1.32
SSH1-203ENST00000546433 PRRC2CQ9Y520 2896 aaKnown RBP6.82□□□□□ -1.32
SSH1-203ENST00000546433 C8orf17Q9NRJ1 99 aa6.81□□□□□ -1.32
SSH1-203ENST00000546433 HELZ2Q9BYK8 2649 aaKnown RBP6.81□□□□□ -1.32
SSH1-203ENST00000546433 ZNF861PO60384 105 aa6.81□□□□□ -1.32
SSH1-203ENST00000546433 C9orf129Q5T035 196 aaKnown RBP6.81□□□□□ -1.32
SSH1-203ENST00000546433 COA5Q86WW8 74 aa6.81□□□□□ -1.32
SSH1-203ENST00000546433 KLKP1Q107X0 134 aa6.81□□□□□ -1.32
SSH1-203ENST00000546433 CHD7Q9P2D1 2997 aa6.81□□□□□ -1.32
SSH1-203ENST00000546433 Q8N377 158 aa6.8□□□□□ -1.32
SSH1-203ENST00000546433 CDH23Q9H251 3354 aa6.8□□□□□ -1.32
SSH1-203ENST00000546433 EIF4EBP3O60516 100 aaPredicted RBP6.8□□□□□ -1.32
SSH1-203ENST00000546433 A0A1B0GVX0 72 aa6.79□□□□□ -1.32
SSH1-203ENST00000546433 C9orf163Q8N9P6 203 aa6.79□□□□□ -1.32
SSH1-203ENST00000546433 ZNF575Q86XF7 245 aa6.78□□□□□ -1.32
SSH1-203ENST00000546433 ATRQ13535 2644 aa6.77□□□□□ -1.33
SSH1-203ENST00000546433 LINC00304Q8N9R0 145 aa6.76□□□□□ -1.33
SSH1-203ENST00000546433 DNAH14Q0VDD8 3507 aa6.76□□□□□ -1.33
SSH1-203ENST00000546433 CNBPP62633 177 aaKnown RBP6.76□□□□□ -1.33
SSH1-203ENST00000546433 UQCR11O14957 56 aa6.75□□□□□ -1.33
SSH1-203ENST00000546433 SMR3BP02814 79 aaPredicted RBP6.74□□□□□ -1.33
SSH1-203ENST00000546433 LINC01600Q96MT4 127 aa6.74□□□□□ -1.33
SSH1-203ENST00000546433 IGLV5-37A0A075B6J1 123 aa6.74□□□□□ -1.33
SSH1-203ENST00000546433 DSCR10P59022 87 aa6.74□□□□□ -1.33
SSH1-203ENST00000546433 PRUNE2Q8WUY3 3088 aa6.73□□□□□ -1.33
SSH1-203ENST00000546433 VCANP13611 3396 aa6.73□□□□□ -1.33
SSH1-203ENST00000546433 A8MUN3 132 aa6.72□□□□□ -1.33
SSH1-203ENST00000546433 IGLV7-43P04211 117 aa6.72□□□□□ -1.33
SSH1-203ENST00000546433 IGLV8-61A0A075B6I0 122 aa6.71□□□□□ -1.34
SSH1-203ENST00000546433 SPRR4Q96PI1 79 aa6.7□□□□□ -1.34
SSH1-203ENST00000546433 USP24Q9UPU5 2620 aa6.7□□□□□ -1.34
SSH1-203ENST00000546433 TRIOO75962 3097 aa6.7□□□□□ -1.34
SSH1-203ENST00000546433 TNP2Q05952 138 aa6.69□□□□□ -1.34
SSH1-203ENST00000546433 SPANXA2-OT1Q8N9U9 137 aa6.69□□□□□ -1.34
SSH1-203ENST00000546433 H7BZZ5 65 aa6.69□□□□□ -1.34
SSH1-203ENST00000546433 A0A1W2PNN7 141 aa6.68□□□□□ -1.34
SSH1-203ENST00000546433 CR1P17927 2039 aa6.68□□□□□ -1.34
SSH1-203ENST00000546433 OBSCN-AS1Q96MR7 158 aa6.68□□□□□ -1.34
SSH1-203ENST00000546433 IGLV5-48A0A075B6I7 105 aa6.68□□□□□ -1.34
SSH1-203ENST00000546433 BAHCC1Q9P281 2608 aa6.68□□□□□ -1.34
SSH1-203ENST00000546433 A0A1W2PNM2 257 aa6.67□□□□□ -1.34
SSH1-203ENST00000546433 COX6B2Q6YFQ2 88 aa6.67□□□□□ -1.34
SSH1-203ENST00000546433 PSORS1C2Q9UIG4 136 aa6.67□□□□□ -1.34
SSH1-203ENST00000546433 SPEGQ15772 3267 aa6.67□□□□□ -1.34
SSH1-203ENST00000546433 MIR22HGQ0VDD5 57 aa6.67□□□□□ -1.34
SSH1-203ENST00000546433 CD164Q04900 197 aa6.63□□□□□ -1.35
SSH1-203ENST00000546433 LINC01554Q52M75 96 aa6.63□□□□□ -1.35
SSH1-203ENST00000546433 USP34Q70CQ2 3546 aa6.62□□□□□ -1.35
SSH1-203ENST00000546433 STAB1Q9NY15 2570 aa6.62□□□□□ -1.35
SSH1-203ENST00000546433 SZT2Q5T011 3432 aa6.62□□□□□ -1.35
SSH1-203ENST00000546433 A0A0G2JQZ4 141 aa6.61□□□□□ -1.35
SSH1-203ENST00000546433 C9orf92A6NGG3 77 aa6.61□□□□□ -1.35
SSH1-203ENST00000546433 Q5VSD8 79 aa6.61□□□□□ -1.35
SSH1-203ENST00000546433 CRIPTQ9P021 101 aa6.6□□□□□ -1.35
SSH1-203ENST00000546433 RBM12B-AS1Q9P1G2 102 aa6.59□□□□□ -1.35
SSH1-203ENST00000546433 ANAPC11Q9NYG5 84 aa6.59□□□□□ -1.35
SSH1-203ENST00000546433 LAMA1P25391 3075 aa6.58□□□□□ -1.36
SSH1-203ENST00000546433 FAM104AQ969W3 186 aa6.58□□□□□ -1.36
SSH1-203ENST00000546433 OCR1Q9BZK8 76 aa6.56□□□□□ -1.36
SSH1-203ENST00000546433 CFAP54Q96N23 3096 aa6.55□□□□□ -1.36
SSH1-203ENST00000546433 OXTP01178 125 aa6.55□□□□□ -1.36
SSH1-203ENST00000546433 MYO15AQ9UKN7 3530 aa6.55□□□□□ -1.36
SSH1-203ENST00000546433 EYSQ5T1H1 3165 aa6.54□□□□□ -1.36
SSH1-203ENST00000546433 LUZP6Q538Z0 58 aa6.53□□□□□ -1.36
SSH1-203ENST00000546433 KTN1-AS1Q86SY8 53 aa6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms