RNA–Protein interactions for RNA: ENST00000545377.5

ARHGEF28-214, Transcript of Rho guanine nucleotide exchange factor 28, humanhuman

APPRIS P3 TSL 5 BASIC

Gene ARHGEF28, Length 6,351 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF28-214ENST00000545377 SMCPP49901 116 aaPredicted RBP11.37□□□□□ -0.59
ARHGEF28-214ENST00000545377 A0A1B0GVX0 72 aa11.37□□□□□ -0.59
ARHGEF28-214ENST00000545377 PKD1L2Q7Z442 2459 aa11.36□□□□□ -0.59
ARHGEF28-214ENST00000545377 C9orf163Q8N9P6 203 aa11.35□□□□□ -0.59
ARHGEF28-214ENST00000545377 C4orf26Q17RF5 130 aa11.34□□□□□ -0.59
ARHGEF28-214ENST00000545377 Q6ZSA8 131 aa11.33□□□□□ -0.6
ARHGEF28-214ENST00000545377 UQCR11O14957 56 aa11.32□□□□□ -0.6
ARHGEF28-214ENST00000545377 FASNP49327 2511 aaKnown RBP11.32□□□□□ -0.6
ARHGEF28-214ENST00000545377 CASC10Q5T4H9 136 aa11.32□□□□□ -0.6
ARHGEF28-214ENST00000545377 Q8N1X5 172 aa11.3□□□□□ -0.6
ARHGEF28-214ENST00000545377 ZNF575Q86XF7 245 aa11.3□□□□□ -0.6
ARHGEF28-214ENST00000545377 PRR15Q8IV56 129 aa11.3□□□□□ -0.6
ARHGEF28-214ENST00000545377 ANKRD17O75179 2603 aaKnown RBP11.29□□□□□ -0.6
ARHGEF28-214ENST00000545377 POLQO75417 2590 aa11.28□□□□□ -0.6
ARHGEF28-214ENST00000545377 IGLV5-48A0A075B6I7 105 aa11.27□□□□□ -0.6
ARHGEF28-214ENST00000545377 SPTBN4Q9H254 2564 aa11.27□□□□□ -0.61
ARHGEF28-214ENST00000545377 MIR22HGQ0VDD5 57 aa11.27□□□□□ -0.61
ARHGEF28-214ENST00000545377 PRR34Q9NV39 138 aa11.27□□□□□ -0.61
ARHGEF28-214ENST00000545377 PRO0628Q9UI54 55 aa11.26□□□□□ -0.61
ARHGEF28-214ENST00000545377 TNP2Q05952 138 aa11.26□□□□□ -0.61
ARHGEF28-214ENST00000545377 Q8N377 158 aa11.26□□□□□ -0.61
ARHGEF28-214ENST00000545377 MTORP42345 2549 aa11.26□□□□□ -0.61
ARHGEF28-214ENST00000545377 USP9YO00507 2555 aaPredicted RBP11.26□□□□□ -0.61
ARHGEF28-214ENST00000545377 LITAFQ99732 161 aa11.25□□□□□ -0.61
ARHGEF28-214ENST00000545377 A8MUN3 132 aa11.24□□□□□ -0.61
ARHGEF28-214ENST00000545377 CEP295Q9C0D2 2601 aa11.23□□□□□ -0.61
ARHGEF28-214ENST00000545377 IGLV7-46A0A075B6I9 117 aa11.23□□□□□ -0.61
ARHGEF28-214ENST00000545377 SPRR4Q96PI1 79 aa11.23□□□□□ -0.61
ARHGEF28-214ENST00000545377 ACANP16112 2415 aa11.23□□□□□ -0.61
ARHGEF28-214ENST00000545377 GIG44P09565 113 aaPredicted RBP11.22□□□□□ -0.61
ARHGEF28-214ENST00000545377 A0A096LNT2 108 aa11.21□□□□□ -0.62
ARHGEF28-214ENST00000545377 LINC00612Q8N6U2 182 aa11.2□□□□□ -0.62
ARHGEF28-214ENST00000545377 PRO0461Q9UI25 63 aa11.19□□□□□ -0.62
ARHGEF28-214ENST00000545377 TLX1NBP0CAT3 122 aa11.18□□□□□ -0.62
ARHGEF28-214ENST00000545377 ERC2-IT1O76042 136 aa11.17□□□□□ -0.62
ARHGEF28-214ENST00000545377 PRR26Q8N8Z3 221 aa11.17□□□□□ -0.62
ARHGEF28-214ENST00000545377 PCSK5Q92824 1860 aa11.16□□□□□ -0.62
ARHGEF28-214ENST00000545377 CAMK2N1Q7Z7J9 78 aa11.15□□□□□ -0.62
ARHGEF28-214ENST00000545377 PLA2G2DQ9UNK4 145 aa11.15□□□□□ -0.62
ARHGEF28-214ENST00000545377 CNBPP62633 177 aaKnown RBP11.13□□□□□ -0.63
ARHGEF28-214ENST00000545377 KLK9Q2XQG4 91 aa11.12□□□□□ -0.63
ARHGEF28-214ENST00000545377 EIF4EBP3O60516 100 aaPredicted RBP11.12□□□□□ -0.63
ARHGEF28-214ENST00000545377 FAM104AQ969W3 186 aa11.11□□□□□ -0.63
ARHGEF28-214ENST00000545377 CDC42SE1Q9NRR8 79 aa11.1□□□□□ -0.63
ARHGEF28-214ENST00000545377 EP400Q96L91 3159 aa11.09□□□□□ -0.63
ARHGEF28-214ENST00000545377 KRTAP1-3Q8IUG1 177 aa11.09□□□□□ -0.63
ARHGEF28-214ENST00000545377 CENPFP49454 3210 aa11.07□□□□□ -0.64
ARHGEF28-214ENST00000545377 CYP4F30PQ9H0H9 118 aa11.07□□□□□ -0.64
ARHGEF28-214ENST00000545377 KRTAP1-1Q07627 177 aa11.03□□□□□ -0.64
ARHGEF28-214ENST00000545377 RPS28P62857 69 aaKnown RBP11.02□□□□□ -0.64
ARHGEF28-214ENST00000545377 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.01□□□□□ -0.65
ARHGEF28-214ENST00000545377 A0A1W2PNM2 257 aa10.97□□□□□ -0.65
ARHGEF28-214ENST00000545377 LUZP6Q538Z0 58 aa10.94□□□□□ -0.66
ARHGEF28-214ENST00000545377 LINC00483Q53H64 154 aa10.93□□□□□ -0.66
ARHGEF28-214ENST00000545377 Q5VSD8 79 aa10.87□□□□□ -0.67
ARHGEF28-214ENST00000545377 CD164Q04900 197 aa10.86□□□□□ -0.67
ARHGEF28-214ENST00000545377 S4R3F8 94 aa10.86□□□□□ -0.67
ARHGEF28-214ENST00000545377 USP24Q9UPU5 2620 aa10.86□□□□□ -0.67
ARHGEF28-214ENST00000545377 MGAM2Q2M2H8 2515 aa10.85□□□□□ -0.67
ARHGEF28-214ENST00000545377 HECTD1Q9ULT8 2610 aa10.83□□□□□ -0.68
ARHGEF28-214ENST00000545377 CSAG1Q6PB30 78 aa10.83□□□□□ -0.68
ARHGEF28-214ENST00000545377 KLKP1Q107X0 134 aa10.81□□□□□ -0.68
ARHGEF28-214ENST00000545377 HRES1P13985 223 aa10.81□□□□□ -0.68
ARHGEF28-214ENST00000545377 FLNBO75369 2602 aaKnown RBP10.8□□□□□ -0.68
ARHGEF28-214ENST00000545377 A0A1B0GU33 70 aa10.79□□□□□ -0.68
ARHGEF28-214ENST00000545377 EPG5Q9HCE0 2579 aa10.78□□□□□ -0.68
ARHGEF28-214ENST00000545377 SEC61BP60468 96 aaKnown RBP10.78□□□□□ -0.68
ARHGEF28-214ENST00000545377 FAM229BQ4G0N7 80 aa10.77□□□□□ -0.69
ARHGEF28-214ENST00000545377 ZCCHC13Q8WW36 166 aaKnown RBP10.75□□□□□ -0.69
ARHGEF28-214ENST00000545377 H7BZZ5 65 aa10.75□□□□□ -0.69
ARHGEF28-214ENST00000545377 Q1T7F1 81 aa10.75□□□□□ -0.69
ARHGEF28-214ENST00000545377 SPANXA2-OT1Q8N9U9 137 aa10.74□□□□□ -0.69
ARHGEF28-214ENST00000545377 PLAC8Q9NZF1 115 aa10.74□□□□□ -0.69
ARHGEF28-214ENST00000545377 CR1P17927 2039 aa10.71□□□□□ -0.7
ARHGEF28-214ENST00000545377 R4GN34 69 aa10.71□□□□□ -0.7
ARHGEF28-214ENST00000545377 LCE6AA0A183 80 aa10.68□□□□□ -0.7
ARHGEF28-214ENST00000545377 LCA10Q71F78 164 aa10.65□□□□□ -0.7
ARHGEF28-214ENST00000545377 KTN1-AS1Q86SY8 53 aa10.65□□□□□ -0.7
ARHGEF28-214ENST00000545377 SPINK7P58062 85 aa10.63□□□□□ -0.71
ARHGEF28-214ENST00000545377 Q8N9P0 234 aaPredicted RBP10.62□□□□□ -0.71
ARHGEF28-214ENST00000545377 BPTFQ12830 3046 aa10.61□□□□□ -0.71
ARHGEF28-214ENST00000545377 KRTAP10-1P60331 282 aa10.6□□□□□ -0.71
ARHGEF28-214ENST00000545377 KRTAP10-2P60368 255 aa10.57□□□□□ -0.72
ARHGEF28-214ENST00000545377 DMAC1Q96GE9 116 aa10.57□□□□□ -0.72
ARHGEF28-214ENST00000545377 PLAC4Q8WY50 150 aa10.56□□□□□ -0.72
ARHGEF28-214ENST00000545377 GOLGB1Q14789 3259 aaKnown RBP10.53□□□□□ -0.72
ARHGEF28-214ENST00000545377 OCR1Q9BZK8 76 aa10.53□□□□□ -0.72
ARHGEF28-214ENST00000545377 MMP24-AS1A0A0U1RRL7 71 aa10.53□□□□□ -0.72
ARHGEF28-214ENST00000545377 Q5W150 140 aa10.51□□□□□ -0.73
ARHGEF28-214ENST00000545377 M0QZ58 72 aa10.5□□□□□ -0.73
ARHGEF28-214ENST00000545377 WIPF1O43516 503 aa10.5□□□□□ -0.73
ARHGEF28-214ENST00000545377 KRTAP1-5Q9BYS1 174 aa10.5□□□□□ -0.73
ARHGEF28-214ENST00000545377 ATRQ13535 2644 aa10.49□□□□□ -0.73
ARHGEF28-214ENST00000545377 OXTP01178 125 aa10.46□□□□□ -0.74
ARHGEF28-214ENST00000545377 MAST4O15021 2626 aa10.45□□□□□ -0.74
ARHGEF28-214ENST00000545377 Q8NDZ9 215 aa10.4□□□□□ -0.75
ARHGEF28-214ENST00000545377 FLNAP21333 2647 aaKnown RBP10.38□□□□□ -0.75
ARHGEF28-214ENST00000545377 ITPR3Q14573 2671 aa10.36□□□□□ -0.75
ARHGEF28-214ENST00000545377 SPRR1AP35321 89 aa10.36□□□□□ -0.75
ARHGEF28-214ENST00000545377 ADM2Q7Z4H4 148 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms