RNA–Protein interactions for RNA: ENST00000545170.5

ATXN3-216, Transcript of ataxin 3, humanhuman

TSL 5 BASIC

Gene ATXN3, Length 6,950 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-216ENST00000545170 C2CD3Q4AC94 2353 aa5.52□□□□□ -1.53
ATXN3-216ENST00000545170 ROMO1P60602 79 aa5.51□□□□□ -1.53
ATXN3-216ENST00000545170 GPR179Q6PRD1 2367 aa5.51□□□□□ -1.53
ATXN3-216ENST00000545170 C10orf142B7Z368 130 aa5.51□□□□□ -1.53
ATXN3-216ENST00000545170 SPRR4Q96PI1 79 aa5.51□□□□□ -1.53
ATXN3-216ENST00000545170 COX6B2Q6YFQ2 88 aa5.5□□□□□ -1.53
ATXN3-216ENST00000545170 HIVEP2P31629 2446 aa5.5□□□□□ -1.53
ATXN3-216ENST00000545170 PRR34Q9NV39 138 aa5.5□□□□□ -1.53
ATXN3-216ENST00000545170 ASB16-AS1Q495Z4 193 aa5.49□□□□□ -1.53
ATXN3-216ENST00000545170 TNRC18O15417 2968 aaPredicted RBP5.49□□□□□ -1.53
ATXN3-216ENST00000545170 CAMK2N1Q7Z7J9 78 aa5.48□□□□□ -1.53
ATXN3-216ENST00000545170 SPG11Q96JI7 2443 aa5.48□□□□□ -1.53
ATXN3-216ENST00000545170 CEP350Q5VT06 3117 aa5.47□□□□□ -1.53
ATXN3-216ENST00000545170 CUL9Q8IWT3 2517 aa5.47□□□□□ -1.53
ATXN3-216ENST00000545170 C19orf73Q9NVV2 129 aa5.47□□□□□ -1.53
ATXN3-216ENST00000545170 ATRXP46100 2492 aa5.47□□□□□ -1.53
ATXN3-216ENST00000545170 KLK9Q2XQG4 91 aa5.46□□□□□ -1.54
ATXN3-216ENST00000545170 A0A096LNT2 108 aa5.46□□□□□ -1.54
ATXN3-216ENST00000545170 MMP24-AS1A0A0U1RRL7 71 aa5.45□□□□□ -1.54
ATXN3-216ENST00000545170 A6NN06 94 aa5.45□□□□□ -1.54
ATXN3-216ENST00000545170 ANKHD1Q8IWZ3 2542 aaKnown RBP5.44□□□□□ -1.54
ATXN3-216ENST00000545170 GIG44P09565 113 aaPredicted RBP5.44□□□□□ -1.54
ATXN3-216ENST00000545170 IGLV7-43P04211 117 aa5.42□□□□□ -1.54
ATXN3-216ENST00000545170 UTRNP46939 3433 aa5.41□□□□□ -1.54
ATXN3-216ENST00000545170 CR1P17927 2039 aa5.41□□□□□ -1.54
ATXN3-216ENST00000545170 PSORS1C2Q9UIG4 136 aa5.41□□□□□ -1.54
ATXN3-216ENST00000545170 KRTAP25-1Q3LHN0 102 aa5.4□□□□□ -1.55
ATXN3-216ENST00000545170 NDUFAF8A1L188 74 aa5.39□□□□□ -1.55
ATXN3-216ENST00000545170 RPL37P61927 97 aaKnown RBP5.39□□□□□ -1.55
ATXN3-216ENST00000545170 Q5W150 140 aa5.38□□□□□ -1.55
ATXN3-216ENST00000545170 CASC10Q5T4H9 136 aa5.38□□□□□ -1.55
ATXN3-216ENST00000545170 S4R3F8 94 aa5.38□□□□□ -1.55
ATXN3-216ENST00000545170 H1FX-AS1Q4G0G2 97 aa5.38□□□□□ -1.55
ATXN3-216ENST00000545170 PTPN13Q12923 2485 aa5.37□□□□□ -1.55
ATXN3-216ENST00000545170 ADM2Q7Z4H4 148 aa5.36□□□□□ -1.55
ATXN3-216ENST00000545170 RIF1Q5UIP0 2472 aaKnown RBP5.36□□□□□ -1.55
ATXN3-216ENST00000545170 LINC00612Q8N6U2 182 aa5.34□□□□□ -1.55
ATXN3-216ENST00000545170 FAM208BQ5VWN6 2430 aa5.34□□□□□ -1.55
ATXN3-216ENST00000545170 ZCCHC13Q8WW36 166 aaKnown RBP5.34□□□□□ -1.56
ATXN3-216ENST00000545170 COL4A2P08572 1712 aa5.33□□□□□ -1.56
ATXN3-216ENST00000545170 SPATA8Q6RVD6 105 aa5.32□□□□□ -1.56
ATXN3-216ENST00000545170 A0A087WTM6 91 aa5.32□□□□□ -1.56
ATXN3-216ENST00000545170 GOLGB1Q14789 3259 aaKnown RBP5.32□□□□□ -1.56
ATXN3-216ENST00000545170 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.31□□□□□ -1.56
ATXN3-216ENST00000545170 Q8NDZ9 215 aa5.31□□□□□ -1.56
ATXN3-216ENST00000545170 HIVEP3Q5T1R4 2406 aa5.3□□□□□ -1.56
ATXN3-216ENST00000545170 LINC00472Q9H8W2 130 aa5.3□□□□□ -1.56
ATXN3-216ENST00000545170 ABCA2Q9BZC7 2435 aa5.28□□□□□ -1.56
ATXN3-216ENST00000545170 SMR3BP02814 79 aaPredicted RBP5.28□□□□□ -1.56
ATXN3-216ENST00000545170 HTTP42858 3142 aa5.28□□□□□ -1.56
ATXN3-216ENST00000545170 J3QL48 77 aa5.28□□□□□ -1.56
ATXN3-216ENST00000545170 A8MU10 97 aa5.27□□□□□ -1.57
ATXN3-216ENST00000545170 SEC61BP60468 96 aaKnown RBP5.26□□□□□ -1.57
ATXN3-216ENST00000545170 Q6ZSA8 131 aa5.26□□□□□ -1.57
ATXN3-216ENST00000545170 KRTAP10-11P60412 298 aa5.26□□□□□ -1.57
ATXN3-216ENST00000545170 SONP18583 2426 aaKnown RBP5.26□□□□□ -1.57
ATXN3-216ENST00000545170 R4GN34 69 aa5.26□□□□□ -1.57
ATXN3-216ENST00000545170 PLAC4Q8WY50 150 aa5.25□□□□□ -1.57
ATXN3-216ENST00000545170 KRTAP26-1Q6PEX3 210 aa5.25□□□□□ -1.57
ATXN3-216ENST00000545170 K7EIL1 84 aa5.24□□□□□ -1.57
ATXN3-216ENST00000545170 Q6ZR54 194 aa5.23□□□□□ -1.57
ATXN3-216ENST00000545170 TNP2Q05952 138 aa5.23□□□□□ -1.57
ATXN3-216ENST00000545170 FN1P02751 2386 aaKnown RBP5.22□□□□□ -1.57
ATXN3-216ENST00000545170 C20orf166-AS1Q96NR2 134 aa5.22□□□□□ -1.57
ATXN3-216ENST00000545170 ZNF462Q96JM2 2506 aa5.21□□□□□ -1.57
ATXN3-216ENST00000545170 ZFHX2Q9C0A1 2572 aaPredicted RBP5.21□□□□□ -1.58
ATXN3-216ENST00000545170 SPRR1AP35321 89 aa5.21□□□□□ -1.58
ATXN3-216ENST00000545170 KRTAP24-1Q3LI83 254 aa5.2□□□□□ -1.58
ATXN3-216ENST00000545170 M0QZ58 72 aa5.19□□□□□ -1.58
ATXN3-216ENST00000545170 PANO1I0J062 215 aa5.17□□□□□ -1.58
ATXN3-216ENST00000545170 KRTAP10-3P60369 221 aa5.17□□□□□ -1.58
ATXN3-216ENST00000545170 KRTAP29-1A8MX34 341 aaPredicted RBP5.16□□□□□ -1.58
ATXN3-216ENST00000545170 TTC28Q96AY4 2481 aa5.16□□□□□ -1.58
ATXN3-216ENST00000545170 A8MUU9 505 aa5.16□□□□□ -1.58
ATXN3-216ENST00000545170 SPRR1BP22528 89 aa5.14□□□□□ -1.59
ATXN3-216ENST00000545170 WWC2-AS2Q96NR7 200 aa5.14□□□□□ -1.59
ATXN3-216ENST00000545170 MYO9AB2RTY4 2548 aa5.13□□□□□ -1.59
ATXN3-216ENST00000545170 M0R2T5 61 aa5.11□□□□□ -1.59
ATXN3-216ENST00000545170 NAV2Q8IVL1 2488 aa5.09□□□□□ -1.59
ATXN3-216ENST00000545170 A0A087X002 238 aa5.09□□□□□ -1.59
ATXN3-216ENST00000545170 ACACBO00763 2458 aa5.09□□□□□ -1.59
ATXN3-216ENST00000545170 LCE6AA0A183 80 aa5.09□□□□□ -1.59
ATXN3-216ENST00000545170 CHD9Q3L8U1 2897 aa5.08□□□□□ -1.6
ATXN3-216ENST00000545170 DOPEY1Q5JWR5 2465 aa5.08□□□□□ -1.6
ATXN3-216ENST00000545170 C10orf95Q9H7T3 257 aa5.07□□□□□ -1.6
ATXN3-216ENST00000545170 PLAC8Q9NZF1 115 aa5.06□□□□□ -1.6
ATXN3-216ENST00000545170 MUC6Q6W4X9 2439 aa5.06□□□□□ -1.6
ATXN3-216ENST00000545170 PCNTO95613 3336 aa5.05□□□□□ -1.6
ATXN3-216ENST00000545170 KRTAP11-1Q8IUC1 163 aa5.05□□□□□ -1.6
ATXN3-216ENST00000545170 SPTBN5Q9NRC6 3674 aaKnown RBP5.04□□□□□ -1.6
ATXN3-216ENST00000545170 PIEZO2Q9H5I5 2752 aa5.04□□□□□ -1.6
ATXN3-216ENST00000545170 TRANK1O15050 2925 aa5.03□□□□□ -1.6
ATXN3-216ENST00000545170 NOTCH2NLQ7Z3S9 236 aa5.03□□□□□ -1.6
ATXN3-216ENST00000545170 LRRK2Q5S007 2527 aa5.02□□□□□ -1.61
ATXN3-216ENST00000545170 KRTAP4-16G5E9R7 235 aaPredicted RBP5.02□□□□□ -1.61
ATXN3-216ENST00000545170 CACNA1AO00555 2505 aa5.01□□□□□ -1.61
ATXN3-216ENST00000545170 CCDC168Q8NDH2 2452 aa5□□□□□ -1.61
ATXN3-216ENST00000545170 WDR87Q6ZQQ6 2873 aa4.98□□□□□ -1.61
ATXN3-216ENST00000545170 BDP1A6H8Y1 2624 aa4.96□□□□□ -1.62
ATXN3-216ENST00000545170 MYO18BQ8IUG5 2567 aa4.95□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms