RNA–Protein interactions for RNA: ENST00000544989.1

HDAC4-216, Transcript of histone deacetylase 4, humanhuman

TSL 5

Gene HDAC4, Length 342 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-216ENST00000544989 PRR4Q16378 134 aa6.92□□□□□ -1.3
HDAC4-216ENST00000544989 TRAV23DV6A0A075B6W5 121 aa6.91□□□□□ -1.3
HDAC4-216ENST00000544989 TSPAN13O95857 204 aa6.91□□□□□ -1.3
HDAC4-216ENST00000544989 SPAG11AQ6PDA7 123 aa6.91□□□□□ -1.3
HDAC4-216ENST00000544989 SCGB1D4Q6XE38 83 aa6.91□□□□□ -1.3
HDAC4-216ENST00000544989 Q6ZRX8 168 aa6.91□□□□□ -1.3
HDAC4-216ENST00000544989 LINC00518Q8N0U6 118 aa6.91□□□□□ -1.3
HDAC4-216ENST00000544989 LINC00308Q8TCZ7 52 aa6.91□□□□□ -1.3
HDAC4-216ENST00000544989 SMCR5Q8TEV8 140 aa6.91□□□□□ -1.3
HDAC4-216ENST00000544989 LITAFQ99732 161 aa6.91□□□□□ -1.3
HDAC4-216ENST00000544989 KRTAP9-2Q9BYQ4 174 aa6.91□□□□□ -1.3
HDAC4-216ENST00000544989 ZNF73O43830 326 aaPredicted RBP6.9□□□□□ -1.3
HDAC4-216ENST00000544989 S100A2P29034 98 aa6.9□□□□□ -1.3
HDAC4-216ENST00000544989 NPC2P61916 151 aa6.9□□□□□ -1.3
HDAC4-216ENST00000544989 SOSTDC1Q6X4U4 206 aa6.9□□□□□ -1.3
HDAC4-216ENST00000544989 Q6ZVH6 145 aa6.9□□□□□ -1.3
HDAC4-216ENST00000544989 C5orf52A6NGY3 159 aa6.89□□□□□ -1.31
HDAC4-216ENST00000544989 SPANXDQ9BXN6 97 aa6.89□□□□□ -1.31
HDAC4-216ENST00000544989 PPDPFQ9H3Y8 114 aa6.89□□□□□ -1.31
HDAC4-216ENST00000544989 S100A6P06703 90 aa6.88□□□□□ -1.31
HDAC4-216ENST00000544989 IFITM1P13164 125 aa6.88□□□□□ -1.31
HDAC4-216ENST00000544989 LINC00483Q53H64 154 aa6.88□□□□□ -1.31
HDAC4-216ENST00000544989 C4orf48Q5BLP8 95 aa6.88□□□□□ -1.31
HDAC4-216ENST00000544989 OR13C6PQ8NH95 151 aa6.87□□□□□ -1.31
HDAC4-216ENST00000544989 HSBP1L1C9JCN9 74 aa6.86□□□□□ -1.31
HDAC4-216ENST00000544989 EIF4EBP3O60516 100 aaPredicted RBP6.86□□□□□ -1.31
HDAC4-216ENST00000544989 HIST3H2BBQ8N257 126 aa6.86□□□□□ -1.31
HDAC4-216ENST00000544989 C3orf22Q8N5N4 141 aa6.86□□□□□ -1.31
HDAC4-216ENST00000544989 TTTY13Q9BZ97 58 aa6.86□□□□□ -1.31
HDAC4-216ENST00000544989 ANKRD39Q53RE8 183 aa6.85□□□□□ -1.31
HDAC4-216ENST00000544989 GAGE2AQ6NT46 116 aa6.85□□□□□ -1.31
HDAC4-216ENST00000544989 ATOH7Q8N100 152 aa6.85□□□□□ -1.31
HDAC4-216ENST00000544989 HIST1H2BLQ99880 126 aa6.85□□□□□ -1.31
HDAC4-216ENST00000544989 Q9BRP9 147 aa6.85□□□□□ -1.31
HDAC4-216ENST00000544989 DHRS4-AS1Q9P1J3 65 aa6.85□□□□□ -1.31
HDAC4-216ENST00000544989 ERC2-IT1O76042 136 aa6.83□□□□□ -1.32
HDAC4-216ENST00000544989 SPINK1P00995 79 aa6.83□□□□□ -1.32
HDAC4-216ENST00000544989 SLC25A34Q6PIV7 304 aa6.83□□□□□ -1.32
HDAC4-216ENST00000544989 SSBP3-AS1Q7Z2R9 100 aa6.83□□□□□ -1.32
HDAC4-216ENST00000544989 TRBV7-6A0A0J9YX20 115 aa6.82□□□□□ -1.32
HDAC4-216ENST00000544989 KRTAP9-6A0A140TA67 174 aa6.82□□□□□ -1.32
HDAC4-216ENST00000544989 Q8NBF4 154 aa6.82□□□□□ -1.32
HDAC4-216ENST00000544989 PCP2Q8IVA1 136 aa6.81□□□□□ -1.32
HDAC4-216ENST00000544989 TRAV13-2A0A0B4J235 113 aa6.8□□□□□ -1.32
HDAC4-216ENST00000544989 COX7BP24311 80 aa6.8□□□□□ -1.32
HDAC4-216ENST00000544989 ELOF1P60002 83 aaKnown RBP6.8□□□□□ -1.32
HDAC4-216ENST00000544989 RPS29P62273 56 aaKnown RBP6.8□□□□□ -1.32
HDAC4-216ENST00000544989 FP248Q71RG6 208 aaPredicted RBP6.8□□□□□ -1.32
HDAC4-216ENST00000544989 IGLV9-49A0A0B4J1Y8 123 aa6.79□□□□□ -1.32
HDAC4-216ENST00000544989 MOBPQ13875 183 aa6.79□□□□□ -1.32
HDAC4-216ENST00000544989 MUSTN1Q8IVN3 82 aa6.79□□□□□ -1.32
HDAC4-216ENST00000544989 TMA7Q9Y2S6 64 aaKnown RBP6.79□□□□□ -1.32
HDAC4-216ENST00000544989 IGLV7-46A0A075B6I9 117 aa6.78□□□□□ -1.32
HDAC4-216ENST00000544989 A0A1B0GWB2 263 aa6.78□□□□□ -1.32
HDAC4-216ENST00000544989 A4D1N5 150 aa6.78□□□□□ -1.32
HDAC4-216ENST00000544989 A6NDN8 102 aa6.78□□□□□ -1.32
HDAC4-216ENST00000544989 TPRXLQ17RH7 258 aa6.78□□□□□ -1.32
HDAC4-216ENST00000544989 C6orf99Q4VX62 202 aa6.78□□□□□ -1.32
HDAC4-216ENST00000544989 SPRR1BP22528 89 aa6.77□□□□□ -1.33
HDAC4-216ENST00000544989 C9orf153Q5TBE3 101 aa6.77□□□□□ -1.33
HDAC4-216ENST00000544989 RETNLBQ9BQ08 111 aa6.77□□□□□ -1.33
HDAC4-216ENST00000544989 SCGB1D1O95968 90 aa6.76□□□□□ -1.33
HDAC4-216ENST00000544989 NHP2Q9NX24 153 aaKnown RBP6.76□□□□□ -1.33
HDAC4-216ENST00000544989 LAMTOR3Q9UHA4 124 aa6.76□□□□□ -1.33
HDAC4-216ENST00000544989 ST20-AS1Q8NBB2 130 aa6.75□□□□□ -1.33
HDAC4-216ENST00000544989 LOC105371267A0A1B0GV96 52 aa6.74□□□□□ -1.33
HDAC4-216ENST00000544989 SLC25A20O43772 301 aa6.74□□□□□ -1.33
HDAC4-216ENST00000544989 VAMP3Q15836 100 aa6.74□□□□□ -1.33
HDAC4-216ENST00000544989 CDIP1Q9H305 208 aa6.74□□□□□ -1.33
HDAC4-216ENST00000544989 TEX49A0A1B0GTD5 131 aa6.73□□□□□ -1.33
HDAC4-216ENST00000544989 TAL2Q16559 108 aa6.73□□□□□ -1.33
HDAC4-216ENST00000544989 DLEU1O43261 78 aa6.71□□□□□ -1.34
HDAC4-216ENST00000544989 LCE2AQ5TA79 106 aaPredicted RBP6.71□□□□□ -1.34
HDAC4-216ENST00000544989 A0A0U1RQV1 116 aa6.7□□□□□ -1.34
HDAC4-216ENST00000544989 COX8AP10176 69 aa6.7□□□□□ -1.34
HDAC4-216ENST00000544989 Q8N377 158 aa6.7□□□□□ -1.34
HDAC4-216ENST00000544989 SMIM11BQ8TCY0 68 aa6.7□□□□□ -1.34
HDAC4-216ENST00000544989 HIST1H4GQ99525 98 aa6.7□□□□□ -1.34
HDAC4-216ENST00000544989 LIMD2Q9BT23 127 aa6.7□□□□□ -1.34
HDAC4-216ENST00000544989 IGLV5-48A0A075B6I7 105 aa6.68□□□□□ -1.34
HDAC4-216ENST00000544989 CD164Q04900 197 aa6.68□□□□□ -1.34
HDAC4-216ENST00000544989 DEFB105AQ8NG35 78 aa6.68□□□□□ -1.34
HDAC4-216ENST00000544989 PRO1933Q9H354 126 aa6.67□□□□□ -1.34
HDAC4-216ENST00000544989 BVES-AS1Q5T3Y7 98 aa6.66□□□□□ -1.34
HDAC4-216ENST00000544989 VAMP8Q9BV40 100 aa6.66□□□□□ -1.34
HDAC4-216ENST00000544989 Q1RN00 199 aa6.65□□□□□ -1.34
HDAC4-216ENST00000544989 KRTAP13-3Q3SY46 172 aa6.65□□□□□ -1.34
HDAC4-216ENST00000544989 HIGD1BQ9P298 99 aa6.65□□□□□ -1.34
HDAC4-216ENST00000544989 hADV29S1A0JD25 119 aa6.64□□□□□ -1.35
HDAC4-216ENST00000544989 H7C2G1 150 aa6.64□□□□□ -1.35
HDAC4-216ENST00000544989 SNCGO76070 127 aa6.64□□□□□ -1.35
HDAC4-216ENST00000544989 LINC01547P58512 204 aaPredicted RBP6.64□□□□□ -1.35
HDAC4-216ENST00000544989 SPATA45Q537H7 98 aa6.64□□□□□ -1.35
HDAC4-216ENST00000544989 LINC00575Q6W349 94 aa6.64□□□□□ -1.35
HDAC4-216ENST00000544989 PAM16Q9Y3D7 125 aa6.64□□□□□ -1.35
HDAC4-216ENST00000544989 F8WEM9 126 aa6.63□□□□□ -1.35
HDAC4-216ENST00000544989 SMIM29Q86T20 159 aa6.62□□□□□ -1.35
HDAC4-216ENST00000544989 PPDPFLQ8WWR9 84 aa6.62□□□□□ -1.35
HDAC4-216ENST00000544989 C14orf144Q96I85 54 aa6.62□□□□□ -1.35
HDAC4-216ENST00000544989 TMEM238LA0A1B0GVL6 79 aa6.61□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 171.2 ms