RNA–Protein interactions for RNA: ENST00000544327.1

SCARB1-208, Transcript of scavenger receptor class B member 1, humanhuman

TSL 5 BASIC

Gene SCARB1, Length 1,812 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-208ENST00000544327 HUWE1Q7Z6Z7 4374 aaKnown RBP11.5□□□□□ -0.57
SCARB1-208ENST00000544327 C9orf153Q5TBE3 101 aa11.5□□□□□ -0.57
SCARB1-208ENST00000544327 Q6ZVQ6 151 aa11.49□□□□□ -0.57
SCARB1-208ENST00000544327 PRYO14603 147 aa11.47□□□□□ -0.57
SCARB1-208ENST00000544327 CRYGAP11844 174 aa11.47□□□□□ -0.57
SCARB1-208ENST00000544327 SERP2Q8N6R1 65 aa11.47□□□□□ -0.57
SCARB1-208ENST00000544327 SPRR1AP35321 89 aa11.46□□□□□ -0.58
SCARB1-208ENST00000544327 FAM19A1Q7Z5A9 133 aa11.46□□□□□ -0.58
SCARB1-208ENST00000544327 BAHCC1Q9P281 2608 aa11.45□□□□□ -0.58
SCARB1-208ENST00000544327 KRTAP4-16G5E9R7 235 aaPredicted RBP11.45□□□□□ -0.58
SCARB1-208ENST00000544327 LINC01547P58512 204 aaPredicted RBP11.45□□□□□ -0.58
SCARB1-208ENST00000544327 CXCL6P80162 114 aa11.45□□□□□ -0.58
SCARB1-208ENST00000544327 IGLV1-50A0A075B6I6 118 aa11.44□□□□□ -0.58
SCARB1-208ENST00000544327 DHRS4-AS1Q9P1J3 65 aa11.44□□□□□ -0.58
SCARB1-208ENST00000544327 LOC107984640A0A0U1RRK4 108 aa11.43□□□□□ -0.58
SCARB1-208ENST00000544327 Q6ZRX8 168 aa11.42□□□□□ -0.58
SCARB1-208ENST00000544327 KRTAP7-1Q8IUC3 87 aa11.42□□□□□ -0.58
SCARB1-208ENST00000544327 BCE1O60756 84 aa11.42□□□□□ -0.58
SCARB1-208ENST00000544327 FAM168BA1KXE4 195 aa11.41□□□□□ -0.58
SCARB1-208ENST00000544327 Q8N377 158 aa11.39□□□□□ -0.59
SCARB1-208ENST00000544327 HAMPP81172 84 aa11.39□□□□□ -0.59
SCARB1-208ENST00000544327 IGLV5-48A0A075B6I7 105 aa11.37□□□□□ -0.59
SCARB1-208ENST00000544327 RPL37AP8A6NKH3 93 aa11.37□□□□□ -0.59
SCARB1-208ENST00000544327 MRPL55Q7Z7F7 128 aaKnown RBP11.37□□□□□ -0.59
SCARB1-208ENST00000544327 Q9BRP9 147 aa11.37□□□□□ -0.59
SCARB1-208ENST00000544327 ETDCA0A1B0GVM5 59 aa11.37□□□□□ -0.59
SCARB1-208ENST00000544327 CNBPP62633 177 aaKnown RBP11.34□□□□□ -0.59
SCARB1-208ENST00000544327 KRTAP1-5Q9BYS1 174 aa11.34□□□□□ -0.59
SCARB1-208ENST00000544327 NOTCH1P46531 2555 aa11.33□□□□□ -0.6
SCARB1-208ENST00000544327 FAM19A5Q7Z5A7 132 aaPredicted RBP11.33□□□□□ -0.6
SCARB1-208ENST00000544327 A0A1B0GW54 56 aa11.32□□□□□ -0.6
SCARB1-208ENST00000544327 APLNQ9ULZ1 77 aa11.32□□□□□ -0.6
SCARB1-208ENST00000544327 TNP2Q05952 138 aa11.32□□□□□ -0.6
SCARB1-208ENST00000544327 DEFB105AQ8NG35 78 aa11.32□□□□□ -0.6
SCARB1-208ENST00000544327 SMIM20Q8N5G0 67 aa11.3□□□□□ -0.6
SCARB1-208ENST00000544327 C16orf90A8MZG2 172 aa11.3□□□□□ -0.6
SCARB1-208ENST00000544327 REG3GQ6UW15 175 aa11.29□□□□□ -0.6
SCARB1-208ENST00000544327 CYSTM1Q9H1C7 97 aa11.29□□□□□ -0.6
SCARB1-208ENST00000544327 TRAV7A0A075B6U4 112 aa11.28□□□□□ -0.6
SCARB1-208ENST00000544327 DYNC2H1Q8NCM8 4307 aaKnown RBP11.28□□□□□ -0.6
SCARB1-208ENST00000544327 COL6A5A8TX70 2615 aa11.28□□□□□ -0.6
SCARB1-208ENST00000544327 C5orf47Q569G3 176 aa11.27□□□□□ -0.61
SCARB1-208ENST00000544327 UBE2DNLQ8IWF7 75 aa11.27□□□□□ -0.61
SCARB1-208ENST00000544327 B9D2Q9BPU9 175 aa11.27□□□□□ -0.61
SCARB1-208ENST00000544327 DNAH9Q9NYC9 4486 aa11.26□□□□□ -0.61
SCARB1-208ENST00000544327 A0A096LNI7 61 aa11.26□□□□□ -0.61
SCARB1-208ENST00000544327 C14orf177Q52M58 125 aa11.26□□□□□ -0.61
SCARB1-208ENST00000544327 ST20-AS1Q8NBB2 130 aa11.26□□□□□ -0.61
SCARB1-208ENST00000544327 NBEAL1Q6ZS30 2694 aa11.26□□□□□ -0.61
SCARB1-208ENST00000544327 TMEM258P61165 79 aa11.25□□□□□ -0.61
SCARB1-208ENST00000544327 NREPQ16612 68 aa11.25□□□□□ -0.61
SCARB1-208ENST00000544327 ERC2-IT1O76042 136 aa11.25□□□□□ -0.61
SCARB1-208ENST00000544327 SCXQ7RTU7 201 aa11.25□□□□□ -0.61
SCARB1-208ENST00000544327 PSCAO43653 123 aa11.24□□□□□ -0.61
SCARB1-208ENST00000544327 FUSP35637 526 aaKnown RBP eCLIP11.23□□□□□ -0.61
SCARB1-208ENST00000544327 UBE2BP63146 152 aa11.23□□□□□ -0.61
SCARB1-208ENST00000544327 A0A1W2PNM2 257 aa11.23□□□□□ -0.61
SCARB1-208ENST00000544327 C1orf137Q5JT78 98 aa11.22□□□□□ -0.61
SCARB1-208ENST00000544327 Q8NBF4 154 aa11.21□□□□□ -0.61
SCARB1-208ENST00000544327 A0A1W2PNN7 141 aa11.21□□□□□ -0.62
SCARB1-208ENST00000544327 C3orf84H3BNL1 204 aa11.21□□□□□ -0.62
SCARB1-208ENST00000544327 IGKV4-1P06312 121 aa11.21□□□□□ -0.62
SCARB1-208ENST00000544327 SPRR4Q96PI1 79 aa11.21□□□□□ -0.62
SCARB1-208ENST00000544327 BPY2O14599 106 aa11.19□□□□□ -0.62
SCARB1-208ENST00000544327 SMIM29Q86T20 159 aa11.19□□□□□ -0.62
SCARB1-208ENST00000544327 IGKV2-24A0A0C4DH68 120 aa11.18□□□□□ -0.62
SCARB1-208ENST00000544327 RPS28P62857 69 aaKnown RBP11.17□□□□□ -0.62
SCARB1-208ENST00000544327 PKIGQ9Y2B9 76 aa11.17□□□□□ -0.62
SCARB1-208ENST00000544327 C20orf197Q8N268 126 aa11.16□□□□□ -0.62
SCARB1-208ENST00000544327 MDFIQ99750 246 aa11.16□□□□□ -0.62
SCARB1-208ENST00000544327 LRCOL1A6NCL2 159 aa11.15□□□□□ -0.62
SCARB1-208ENST00000544327 NUPR2A6NF83 97 aa11.15□□□□□ -0.62
SCARB1-208ENST00000544327 DNAH10Q8IVF4 4471 aa11.15□□□□□ -0.63
SCARB1-208ENST00000544327 J3KT08 172 aa11.14□□□□□ -0.63
SCARB1-208ENST00000544327 KLKP1Q107X0 134 aa11.14□□□□□ -0.63
SCARB1-208ENST00000544327 C9orf163Q8N9P6 203 aa11.14□□□□□ -0.63
SCARB1-208ENST00000544327 IGLV8-61A0A075B6I0 122 aa11.13□□□□□ -0.63
SCARB1-208ENST00000544327 IGLV2-33A0A075B6J2 118 aaPredicted RBP11.13□□□□□ -0.63
SCARB1-208ENST00000544327 NBDYA0A0U1RRE5 68 aa11.13□□□□□ -0.63
SCARB1-208ENST00000544327 H0Y9J4 135 aa11.12□□□□□ -0.63
SCARB1-208ENST00000544327 Q8N9L7 120 aa11.12□□□□□ -0.63
SCARB1-208ENST00000544327 F8WEM9 126 aa11.12□□□□□ -0.63
SCARB1-208ENST00000544327 LINC00476Q8WZB0 136 aa11.12□□□□□ -0.63
SCARB1-208ENST00000544327 MGAM2Q2M2H8 2515 aa11.11□□□□□ -0.63
SCARB1-208ENST00000544327 PRLHP81277 87 aa11.11□□□□□ -0.63
SCARB1-208ENST00000544327 Q6ZRN7 208 aaPredicted RBP11.11□□□□□ -0.63
SCARB1-208ENST00000544327 DPH3Q96FX2 82 aa11.1□□□□□ -0.63
SCARB1-208ENST00000544327 COL7A1Q02388 2944 aa11.09□□□□□ -0.63
SCARB1-208ENST00000544327 CHTF8P0CG12 524 aa11.09□□□□□ -0.63
SCARB1-208ENST00000544327 PHF5AQ7RTV0 110 aaKnown RBP11.08□□□□□ -0.64
SCARB1-208ENST00000544327 H7BZZ5 65 aa11.07□□□□□ -0.64
SCARB1-208ENST00000544327 SPRR1BP22528 89 aa11.07□□□□□ -0.64
SCARB1-208ENST00000544327 LINC00474Q9P2X8 69 aa11.07□□□□□ -0.64
SCARB1-208ENST00000544327 IGFL1Q6UW32 110 aa11.07□□□□□ -0.64
SCARB1-208ENST00000544327 KRTAP11-1Q8IUC1 163 aa11.07□□□□□ -0.64
SCARB1-208ENST00000544327 STAB2Q8WWQ8 2551 aa11.07□□□□□ -0.64
SCARB1-208ENST00000544327 OCR1Q9BZK8 76 aa11.06□□□□□ -0.64
SCARB1-208ENST00000544327 HIGD2AQ9BW72 106 aa11.05□□□□□ -0.64
SCARB1-208ENST00000544327 LYSTQ99698 3801 aa11.04□□□□□ -0.64
SCARB1-208ENST00000544327 PLECQ15149 4684 aaKnown RBP11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms