RNA–Protein interactions for RNA: ENST00000544293.1

C2CD3-220, Transcript of C2 calcium dependent domain containing 3, humanhuman

TSL 2

Gene C2CD3, Length 731 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2CD3-220ENST00000544293 PMCHL1Q16048 86 aa4.97□□□□□ -1.61
C2CD3-220ENST00000544293 C9orf153Q5TBE3 101 aa4.97□□□□□ -1.61
C2CD3-220ENST00000544293 HRCT1Q6UXD1 115 aa4.97□□□□□ -1.61
C2CD3-220ENST00000544293 FA2HQ7L5A8 372 aa4.97□□□□□ -1.61
C2CD3-220ENST00000544293 COX6B2Q6YFQ2 88 aa4.96□□□□□ -1.62
C2CD3-220ENST00000544293 SPRR1BP22528 89 aa4.95□□□□□ -1.62
C2CD3-220ENST00000544293 DDTP30046 118 aa4.95□□□□□ -1.62
C2CD3-220ENST00000544293 SYNE2Q8WXH0 6885 aaKnown RBP4.94□□□□□ -1.62
C2CD3-220ENST00000544293 TRBV10-2A0A0K0K1G8 114 aa4.94□□□□□ -1.62
C2CD3-220ENST00000544293 LINC00614P0C842 121 aa4.94□□□□□ -1.62
C2CD3-220ENST00000544293 SMCO4Q9NRQ5 59 aa4.94□□□□□ -1.62
C2CD3-220ENST00000544293 CHTOPQ9Y3Y2 248 aaKnown RBP4.94□□□□□ -1.62
C2CD3-220ENST00000544293 HBDP02042 147 aa4.93□□□□□ -1.62
C2CD3-220ENST00000544293 MEIG1Q5JSS6 88 aa4.93□□□□□ -1.62
C2CD3-220ENST00000544293 C1orf195Q5TG92 126 aa4.93□□□□□ -1.62
C2CD3-220ENST00000544293 C18orf32Q8TCD1 76 aa4.93□□□□□ -1.62
C2CD3-220ENST00000544293 TSPEAR-AS2P59090 65 aa4.92□□□□□ -1.62
C2CD3-220ENST00000544293 FABP9Q0Z7S8 132 aa4.92□□□□□ -1.62
C2CD3-220ENST00000544293 ATP6V1G1O75348 118 aa4.91□□□□□ -1.62
C2CD3-220ENST00000544293 HERV-K104P63124 156 aa4.91□□□□□ -1.62
C2CD3-220ENST00000544293 Q5XG85 94 aa4.91□□□□□ -1.62
C2CD3-220ENST00000544293 SVIPQ8NHG7 77 aa4.91□□□□□ -1.62
C2CD3-220ENST00000544293 LIMD2Q9BT23 127 aa4.91□□□□□ -1.62
C2CD3-220ENST00000544293 RPS10P5Q9NQ39 176 aa4.91□□□□□ -1.62
C2CD3-220ENST00000544293 A0A0G2JQZ4 141 aa4.9□□□□□ -1.63
C2CD3-220ENST00000544293 C5orf52A6NGY3 159 aa4.9□□□□□ -1.63
C2CD3-220ENST00000544293 SOSTDC1Q6X4U4 206 aa4.9□□□□□ -1.63
C2CD3-220ENST00000544293 TRAV23DV6A0A075B6W5 121 aa4.89□□□□□ -1.63
C2CD3-220ENST00000544293 TRAV12-1A0A0B4J245 112 aa4.89□□□□□ -1.63
C2CD3-220ENST00000544293 H7C2G1 150 aa4.89□□□□□ -1.63
C2CD3-220ENST00000544293 ZNF73O43830 326 aaPredicted RBP4.89□□□□□ -1.63
C2CD3-220ENST00000544293 CFC1P0CG37 223 aa4.89□□□□□ -1.63
C2CD3-220ENST00000544293 CD164Q04900 197 aa4.89□□□□□ -1.63
C2CD3-220ENST00000544293 MACF1Q9UPN3 7388 aaKnown RBP4.88□□□□□ -1.63
C2CD3-220ENST00000544293 LINC00587B1AMM8 73 aa4.88□□□□□ -1.63
C2CD3-220ENST00000544293 TRIAP1O43715 76 aa4.88□□□□□ -1.63
C2CD3-220ENST00000544293 NDUFC2O95298 119 aa4.88□□□□□ -1.63
C2CD3-220ENST00000544293 MT2AP02795 61 aa4.88□□□□□ -1.63
C2CD3-220ENST00000544293 JOSD1Q15040 202 aaPredicted RBP4.88□□□□□ -1.63
C2CD3-220ENST00000544293 SMIM29Q86T20 159 aa4.88□□□□□ -1.63
C2CD3-220ENST00000544293 KRTAP9-3Q9BYQ3 159 aa4.88□□□□□ -1.63
C2CD3-220ENST00000544293 SPANXB1Q9NS25 103 aaPredicted RBP4.88□□□□□ -1.63
C2CD3-220ENST00000544293 MYMXA0A1B0GTQ4 84 aa4.87□□□□□ -1.63
C2CD3-220ENST00000544293 TMEM218A2RU14 115 aa4.87□□□□□ -1.63
C2CD3-220ENST00000544293 S100A12P80511 92 aa4.87□□□□□ -1.63
C2CD3-220ENST00000544293 COX19Q49B96 90 aa4.86□□□□□ -1.63
C2CD3-220ENST00000544293 ADAMTSL4-AS1Q5T5F5 129 aa4.86□□□□□ -1.63
C2CD3-220ENST00000544293 Q6Q795 121 aa4.86□□□□□ -1.63
C2CD3-220ENST00000544293 IFI27L1Q96BM0 104 aa4.86□□□□□ -1.63
C2CD3-220ENST00000544293 MAP1LC3CQ9BXW4 147 aa4.86□□□□□ -1.63
C2CD3-220ENST00000544293 SEC11CQ9BY50 192 aa4.86□□□□□ -1.63
C2CD3-220ENST00000544293 MT1FP04733 61 aa4.85□□□□□ -1.63
C2CD3-220ENST00000544293 S100A7L2Q5SY68 101 aa4.85□□□□□ -1.63
C2CD3-220ENST00000544293 LAMTOR3Q9UHA4 124 aa4.85□□□□□ -1.63
C2CD3-220ENST00000544293 Q1RN00 199 aa4.84□□□□□ -1.63
C2CD3-220ENST00000544293 TRAPPC1Q9Y5R8 145 aa4.84□□□□□ -1.63
C2CD3-220ENST00000544293 LEPROTO15243 131 aa4.83□□□□□ -1.64
C2CD3-220ENST00000544293 S100PP25815 95 aa4.83□□□□□ -1.64
C2CD3-220ENST00000544293 PRO1933Q9H354 126 aa4.83□□□□□ -1.64
C2CD3-220ENST00000544293 NPC2P61916 151 aa4.82□□□□□ -1.64
C2CD3-220ENST00000544293 SLC25A34Q6PIV7 304 aa4.82□□□□□ -1.64
C2CD3-220ENST00000544293 J3QQQ9 107 aa4.81□□□□□ -1.64
C2CD3-220ENST00000544293 CLLU1Q5K131 121 aa4.81□□□□□ -1.64
C2CD3-220ENST00000544293 DEFB105AQ8NG35 78 aa4.81□□□□□ -1.64
C2CD3-220ENST00000544293 DHRS4-AS1Q9P1J3 65 aa4.81□□□□□ -1.64
C2CD3-220ENST00000544293 AKR1D1P51857 326 aa4.8□□□□□ -1.64
C2CD3-220ENST00000544293 C10orf91Q5T1B1 145 aa4.8□□□□□ -1.64
C2CD3-220ENST00000544293 A0A0J9YXY3 114 aa4.79□□□□□ -1.64
C2CD3-220ENST00000544293 TEX49A0A1B0GTD5 131 aa4.79□□□□□ -1.64
C2CD3-220ENST00000544293 ELOF1P60002 83 aaKnown RBP4.79□□□□□ -1.64
C2CD3-220ENST00000544293 UQCC3Q6UW78 93 aa4.79□□□□□ -1.64
C2CD3-220ENST00000544293 Q75L30 129 aa4.79□□□□□ -1.64
C2CD3-220ENST00000544293 CHCHD1Q96BP2 118 aaKnown RBP4.79□□□□□ -1.64
C2CD3-220ENST00000544293 LITAFQ99732 161 aa4.79□□□□□ -1.64
C2CD3-220ENST00000544293 TAL2Q16559 108 aa4.78□□□□□ -1.64
C2CD3-220ENST00000544293 MIEN1Q9BRT3 115 aa4.78□□□□□ -1.64
C2CD3-220ENST00000544293 IGLV5-48A0A075B6I7 105 aa4.77□□□□□ -1.65
C2CD3-220ENST00000544293 HINT1P49773 126 aaPredicted RBP4.77□□□□□ -1.65
C2CD3-220ENST00000544293 IFITM2Q01629 132 aa4.77□□□□□ -1.65
C2CD3-220ENST00000544293 RHEBQ15382 184 aa4.77□□□□□ -1.65
C2CD3-220ENST00000544293 KRTAP19-6Q3LI70 58 aa4.77□□□□□ -1.65
C2CD3-220ENST00000544293 C20orf202A1L168 122 aa4.76□□□□□ -1.65
C2CD3-220ENST00000544293 COX7BP24311 80 aa4.76□□□□□ -1.65
C2CD3-220ENST00000544293 NMUP48645 174 aa4.76□□□□□ -1.65
C2CD3-220ENST00000544293 C6orf99Q4VX62 202 aa4.76□□□□□ -1.65
C2CD3-220ENST00000544293 ATP11AUNQ6ZP68 121 aa4.76□□□□□ -1.65
C2CD3-220ENST00000544293 LINC00308Q8TCZ7 52 aa4.76□□□□□ -1.65
C2CD3-220ENST00000544293 YPEL4Q96NS1 127 aa4.76□□□□□ -1.65
C2CD3-220ENST00000544293 PMCHL2Q9BQD1 86 aa4.76□□□□□ -1.65
C2CD3-220ENST00000544293 H0Y8G0 127 aa4.75□□□□□ -1.65
C2CD3-220ENST00000544293 KRTAP6-3Q3LI67 103 aa4.75□□□□□ -1.65
C2CD3-220ENST00000544293 OR13C6PQ8NH95 151 aa4.75□□□□□ -1.65
C2CD3-220ENST00000544293 OBSCN-AS1Q96MR7 158 aa4.75□□□□□ -1.65
C2CD3-220ENST00000544293 LGALS3P17931 250 aaKnown RBP4.74□□□□□ -1.65
C2CD3-220ENST00000544293 COMMD7Q86VX2 200 aa4.74□□□□□ -1.65
C2CD3-220ENST00000544293 SPANXCQ9NY87 97 aa4.74□□□□□ -1.65
C2CD3-220ENST00000544293 KRTAP16-1A8MUX0 517 aa4.73□□□□□ -1.65
C2CD3-220ENST00000544293 KRTAP10-10P60014 251 aa4.73□□□□□ -1.65
C2CD3-220ENST00000544293 SPANXDQ9BXN6 97 aa4.73□□□□□ -1.65
C2CD3-220ENST00000544293 TCL1BO95988 128 aa4.72□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms