RNA–Protein interactions for RNA: ENST00000544179.1

TM7SF3-216, Transcript of transmembrane 7 superfamily member 3, humanhuman

TSL 2

Gene TM7SF3, Length 412 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM7SF3-216ENST00000544179 C9orf163Q8N9P6 203 aa2.29□□□□□ -2.04
TM7SF3-216ENST00000544179 UBL5Q9BZL1 73 aa2.29□□□□□ -2.04
TM7SF3-216ENST00000544179 COL6A3P12111 3177 aa2.29□□□□□ -2.04
TM7SF3-216ENST00000544179 TPRP12270 2363 aaKnown RBP2.29□□□□□ -2.04
TM7SF3-216ENST00000544179 CEP250Q9BV73 2442 aa2.28□□□□□ -2.04
TM7SF3-216ENST00000544179 CNOT1A5YKK6 2376 aaKnown RBP2.28□□□□□ -2.04
TM7SF3-216ENST00000544179 PLCE1Q9P212 2302 aa2.28□□□□□ -2.04
TM7SF3-216ENST00000544179 ABCA1O95477 2261 aa2.28□□□□□ -2.04
TM7SF3-216ENST00000544179 EYSQ5T1H1 3165 aa2.28□□□□□ -2.04
TM7SF3-216ENST00000544179 IGKV2-40A0A087WW87 121 aaPredicted RBP2.28□□□□□ -2.04
TM7SF3-216ENST00000544179 TRAV21A0A0B4J279 112 aa2.28□□□□□ -2.04
TM7SF3-216ENST00000544179 LCE6AA0A183 80 aa2.28□□□□□ -2.04
TM7SF3-216ENST00000544179 H3BUA1 57 aa2.28□□□□□ -2.04
TM7SF3-216ENST00000544179 IGKV2D-40P01614 121 aaPredicted RBP2.28□□□□□ -2.04
TM7SF3-216ENST00000544179 KLK9Q2XQG4 91 aa2.28□□□□□ -2.04
TM7SF3-216ENST00000544179 COX7B2Q8TF08 81 aa2.28□□□□□ -2.04
TM7SF3-216ENST00000544179 LINC00208Q96KT6 92 aa2.28□□□□□ -2.04
TM7SF3-216ENST00000544179 CNFNQ9BYD5 112 aa2.28□□□□□ -2.04
TM7SF3-216ENST00000544179 KLK9Q9UKQ9 250 aa2.28□□□□□ -2.04
TM7SF3-216ENST00000544179 VCANP13611 3396 aa2.28□□□□□ -2.04
TM7SF3-216ENST00000544179 ROS1P08922 2347 aa2.28□□□□□ -2.05
TM7SF3-216ENST00000544179 PTPRZ1P23471 2315 aaPredicted RBP2.28□□□□□ -2.05
TM7SF3-216ENST00000544179 MUC3AQ02505 3323 aa2.27□□□□□ -2.05
TM7SF3-216ENST00000544179 CACNA1HO95180 2353 aa2.27□□□□□ -2.05
TM7SF3-216ENST00000544179 TRAV40A0A0B4J280 105 aa2.27□□□□□ -2.05
TM7SF3-216ENST00000544179 IGIPA6NJ69 53 aa2.27□□□□□ -2.05
TM7SF3-216ENST00000544179 NDUFA4O00483 81 aa2.27□□□□□ -2.05
TM7SF3-216ENST00000544179 CCL18P55774 89 aa2.27□□□□□ -2.05
TM7SF3-216ENST00000544179 ST20-AS1Q8NBB2 130 aa2.27□□□□□ -2.05
TM7SF3-216ENST00000544179 ZCCHC13Q8WW36 166 aaKnown RBP2.27□□□□□ -2.05
TM7SF3-216ENST00000544179 ZFHX2Q9C0A1 2572 aaPredicted RBP2.26□□□□□ -2.05
TM7SF3-216ENST00000544179 I3L3M4 83 aa2.26□□□□□ -2.05
TM7SF3-216ENST00000544179 SPINK7P58062 85 aa2.26□□□□□ -2.05
TM7SF3-216ENST00000544179 PRB3Q04118 309 aaPredicted RBP2.26□□□□□ -2.05
TM7SF3-216ENST00000544179 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa2.26□□□□□ -2.05
TM7SF3-216ENST00000544179 WFDC9Q8NEX5 89 aa2.26□□□□□ -2.05
TM7SF3-216ENST00000544179 SETXQ7Z333 2677 aaKnown RBP2.26□□□□□ -2.05
TM7SF3-216ENST00000544179 WNK2Q9Y3S1 2297 aa2.26□□□□□ -2.05
TM7SF3-216ENST00000544179 RIF1Q5UIP0 2472 aaKnown RBP2.26□□□□□ -2.05
TM7SF3-216ENST00000544179 SPEGQ15772 3267 aa2.25□□□□□ -2.05
TM7SF3-216ENST00000544179 PCNX1Q96RV3 2341 aa2.25□□□□□ -2.05
TM7SF3-216ENST00000544179 IGKV3OR2-268A0A0C4DH90 116 aa2.25□□□□□ -2.05
TM7SF3-216ENST00000544179 G3V318 75 aa2.25□□□□□ -2.05
TM7SF3-216ENST00000544179 H0Y9P7 68 aa2.25□□□□□ -2.05
TM7SF3-216ENST00000544179 MGPP08493 103 aa2.25□□□□□ -2.05
TM7SF3-216ENST00000544179 KRTAP13-2Q52LG2 175 aa2.25□□□□□ -2.05
TM7SF3-216ENST00000544179 C5orf56Q8N8D9 126 aa2.25□□□□□ -2.05
TM7SF3-216ENST00000544179 SMIM2Q9BVW6 85 aa2.25□□□□□ -2.05
TM7SF3-216ENST00000544179 HIGD2AQ9BW72 106 aa2.25□□□□□ -2.05
TM7SF3-216ENST00000544179 OTOGLQ3ZCN5 2332 aa2.25□□□□□ -2.05
TM7SF3-216ENST00000544179 MUC19Q7Z5P9 8384 aa2.25□□□□□ -2.05
TM7SF3-216ENST00000544179 ANKRD11Q6UB99 2663 aaPredicted RBP2.24□□□□□ -2.05
TM7SF3-216ENST00000544179 FREM2Q5SZK8 3169 aa2.24□□□□□ -2.05
TM7SF3-216ENST00000544179 CELSR3Q9NYQ7 3312 aa2.24□□□□□ -2.05
TM7SF3-216ENST00000544179 ACACAQ13085 2346 aa2.24□□□□□ -2.05
TM7SF3-216ENST00000544179 PIEZO2Q9H5I5 2752 aa2.24□□□□□ -2.05
TM7SF3-216ENST00000544179 PKDREJQ9NTG1 2253 aa2.24□□□□□ -2.05
TM7SF3-216ENST00000544179 TTC28Q96AY4 2481 aa2.24□□□□□ -2.05
TM7SF3-216ENST00000544179 UQCR11O14957 56 aa2.24□□□□□ -2.05
TM7SF3-216ENST00000544179 SPRR4Q96PI1 79 aa2.24□□□□□ -2.05
TM7SF3-216ENST00000544179 RHPN1-AS1Q9BWJ2 59 aa2.24□□□□□ -2.05
TM7SF3-216ENST00000544179 USP34Q70CQ2 3546 aa2.24□□□□□ -2.05
TM7SF3-216ENST00000544179 ZFHX3Q15911 3703 aa2.24□□□□□ -2.05
TM7SF3-216ENST00000544179 ZNF462Q96JM2 2506 aa2.24□□□□□ -2.05
TM7SF3-216ENST00000544179 GVINP1Q7Z2Y8 2422 aa2.23□□□□□ -2.05
TM7SF3-216ENST00000544179 FLNBO75369 2602 aaKnown RBP2.23□□□□□ -2.05
TM7SF3-216ENST00000544179 TACC2O95359 2948 aa2.23□□□□□ -2.05
TM7SF3-216ENST00000544179 JMJD7-PLA2G4BH0Y9G9 81 aa2.23□□□□□ -2.05
TM7SF3-216ENST00000544179 CCL19Q99731 98 aa2.23□□□□□ -2.05
TM7SF3-216ENST00000544179 WFDC10AQ9H1F0 79 aa2.23□□□□□ -2.05
TM7SF3-216ENST00000544179 WDFY4Q6ZS81 3184 aa2.23□□□□□ -2.05
TM7SF3-216ENST00000544179 USP9XQ93008 2570 aaPredicted RBP2.23□□□□□ -2.05
TM7SF3-216ENST00000544179 NAV3Q8IVL0 2385 aa2.23□□□□□ -2.05
TM7SF3-216ENST00000544179 CACNA1BQ00975 2339 aa2.23□□□□□ -2.05
TM7SF3-216ENST00000544179 ABCA4P78363 2273 aa2.22□□□□□ -2.05
TM7SF3-216ENST00000544179 SPTA1P02549 2419 aa2.22□□□□□ -2.05
TM7SF3-216ENST00000544179 PTPN13Q12923 2485 aa2.22□□□□□ -2.05
TM7SF3-216ENST00000544179 H3BUX3 64 aa2.22□□□□□ -2.05
TM7SF3-216ENST00000544179 KALRNO60229 2985 aa2.22□□□□□ -2.05
TM7SF3-216ENST00000544179 PDE6GP18545 87 aa2.22□□□□□ -2.05
TM7SF3-216ENST00000544179 POLR2KP53803 58 aaKnown RBP2.22□□□□□ -2.05
TM7SF3-216ENST00000544179 SPATA8Q6RVD6 105 aa2.22□□□□□ -2.05
TM7SF3-216ENST00000544179 ZNF292O60281 2723 aa2.22□□□□□ -2.05
TM7SF3-216ENST00000544179 ANKHD1Q8IWZ3 2542 aaKnown RBP2.22□□□□□ -2.05
TM7SF3-216ENST00000544179 MGAQ8IWI9 3026 aa2.21□□□□□ -2.06
TM7SF3-216ENST00000544179 SPTBN1Q01082 2364 aaKnown RBP2.21□□□□□ -2.06
TM7SF3-216ENST00000544179 RNASE3P12724 160 aaKnown RBP2.21□□□□□ -2.06
TM7SF3-216ENST00000544179 C4orf3Q8WVX3 66 aa2.21□□□□□ -2.06
TM7SF3-216ENST00000544179 RPL39LQ96EH5 51 aaKnown RBP2.21□□□□□ -2.06
TM7SF3-216ENST00000544179 BOD1L1Q8NFC6 3051 aa2.21□□□□□ -2.06
TM7SF3-216ENST00000544179 APC2O95996 2303 aa2.2□□□□□ -2.06
TM7SF3-216ENST00000544179 LRBAP50851 2863 aa2.2□□□□□ -2.06
TM7SF3-216ENST00000544179 ZFHX4Q86UP3 3567 aa2.2□□□□□ -2.06
TM7SF3-216ENST00000544179 ZZEF1O43149 2961 aa2.2□□□□□ -2.06
TM7SF3-216ENST00000544179 M0QY20 66 aa2.2□□□□□ -2.06
TM7SF3-216ENST00000544179 DEFB112Q30KQ8 113 aa2.2□□□□□ -2.06
TM7SF3-216ENST00000544179 SPINT4Q6UDR6 99 aa2.2□□□□□ -2.06
TM7SF3-216ENST00000544179 BRD3OSQ6XYD6 125 aa2.2□□□□□ -2.06
TM7SF3-216ENST00000544179 ZNF625Q96I27 306 aaPredicted RBP2.2□□□□□ -2.06
TM7SF3-216ENST00000544179 PRO2289Q9P1D8 64 aa2.2□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms