RNA–Protein interactions for RNA: ENST00000543721.1

LMO3-229, Transcript of LIM domain only 3, humanhuman

TSL 2

Gene LMO3, Length 3,626 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-229ENST00000543721 DCHS2Q6V1P9 2916 aa3.28□□□□□ -1.88
LMO3-229ENST00000543721 HIVEP2P31629 2446 aa3.28□□□□□ -1.88
LMO3-229ENST00000543721 A0A1W2PNM2 257 aa3.28□□□□□ -1.88
LMO3-229ENST00000543721 DEFB105AQ8NG35 78 aa3.28□□□□□ -1.88
LMO3-229ENST00000543721 Q9BRP9 147 aa3.28□□□□□ -1.88
LMO3-229ENST00000543721 SPENQ96T58 3664 aaKnown RBP3.28□□□□□ -1.88
LMO3-229ENST00000543721 BSNQ9UPA5 3926 aa3.28□□□□□ -1.88
LMO3-229ENST00000543721 CR1P17927 2039 aa3.28□□□□□ -1.89
LMO3-229ENST00000543721 SYCNQ0VAF6 134 aa3.27□□□□□ -1.89
LMO3-229ENST00000543721 LRCOL1A6NCL2 159 aa3.27□□□□□ -1.89
LMO3-229ENST00000543721 DSCR10P59022 87 aa3.27□□□□□ -1.89
LMO3-229ENST00000543721 ATP11AUNQ6ZP68 121 aa3.27□□□□□ -1.89
LMO3-229ENST00000543721 KTN1-AS1Q86SY8 53 aa3.27□□□□□ -1.89
LMO3-229ENST00000543721 AKAP13Q12802 2813 aa3.27□□□□□ -1.89
LMO3-229ENST00000543721 DMDP11532 3685 aa3.26□□□□□ -1.89
LMO3-229ENST00000543721 A8MUN3 132 aa3.26□□□□□ -1.89
LMO3-229ENST00000543721 Q6ZRX8 168 aa3.26□□□□□ -1.89
LMO3-229ENST00000543721 LINC00208Q96KT6 92 aa3.26□□□□□ -1.89
LMO3-229ENST00000543721 CENPEQ02224 2701 aa3.26□□□□□ -1.89
LMO3-229ENST00000543721 ZFHX4Q86UP3 3567 aa3.26□□□□□ -1.89
LMO3-229ENST00000543721 H3BNG1 76 aa3.26□□□□□ -1.89
LMO3-229ENST00000543721 PRB1P04280 392 aa3.26□□□□□ -1.89
LMO3-229ENST00000543721 MAST4O15021 2626 aa3.26□□□□□ -1.89
LMO3-229ENST00000543721 CSMD1Q96PZ7 3565 aa3.26□□□□□ -1.89
LMO3-229ENST00000543721 CHKB-CPT1BH3BT56 60 aa3.26□□□□□ -1.89
LMO3-229ENST00000543721 IGLV5-37A0A075B6J1 123 aa3.25□□□□□ -1.89
LMO3-229ENST00000543721 K7EQZ3 153 aa3.25□□□□□ -1.89
LMO3-229ENST00000543721 Q5VV11 94 aa3.25□□□□□ -1.89
LMO3-229ENST00000543721 C7orf33Q8WU49 177 aa3.25□□□□□ -1.89
LMO3-229ENST00000543721 ZNF292O60281 2723 aa3.25□□□□□ -1.89
LMO3-229ENST00000543721 TLX1NBP0CAT3 122 aa3.25□□□□□ -1.89
LMO3-229ENST00000543721 SPRR1AP35321 89 aa3.25□□□□□ -1.89
LMO3-229ENST00000543721 LINC00588Q9Y4M8 146 aa3.25□□□□□ -1.89
LMO3-229ENST00000543721 HTN3P15516 51 aa3.24□□□□□ -1.89
LMO3-229ENST00000543721 Q75L30 129 aa3.24□□□□□ -1.89
LMO3-229ENST00000543721 Q8N9P0 234 aaPredicted RBP3.24□□□□□ -1.89
LMO3-229ENST00000543721 ST20-AS1Q8NBB2 130 aa3.24□□□□□ -1.89
LMO3-229ENST00000543721 DEFB135Q30KP9 77 aa3.24□□□□□ -1.89
LMO3-229ENST00000543721 KRTAP26-1Q6PEX3 210 aa3.24□□□□□ -1.89
LMO3-229ENST00000543721 C15orf56Q8N910 161 aa3.24□□□□□ -1.89
LMO3-229ENST00000543721 LOC101927531A0A1B0GV80 90 aa3.24□□□□□ -1.89
LMO3-229ENST00000543721 RPL37AP8A6NKH3 93 aa3.24□□□□□ -1.89
LMO3-229ENST00000543721 PRR26Q8N8Z3 221 aa3.23□□□□□ -1.89
LMO3-229ENST00000543721 Q8NAQ8 132 aa3.23□□□□□ -1.89
LMO3-229ENST00000543721 PRR15LQ9BU68 103 aa3.23□□□□□ -1.89
LMO3-229ENST00000543721 MAP1AP78559 2803 aaPredicted RBP3.23□□□□□ -1.89
LMO3-229ENST00000543721 IGLV1-50A0A075B6I6 118 aa3.23□□□□□ -1.89
LMO3-229ENST00000543721 H0Y9P7 68 aa3.23□□□□□ -1.89
LMO3-229ENST00000543721 PRR4Q16378 134 aa3.23□□□□□ -1.89
LMO3-229ENST00000543721 PHF5AQ7RTV0 110 aaKnown RBP3.23□□□□□ -1.89
LMO3-229ENST00000543721 C11orf45Q8TAV5 145 aa3.23□□□□□ -1.89
LMO3-229ENST00000543721 ANK2Q01484 3957 aa3.23□□□□□ -1.89
LMO3-229ENST00000543721 KRTAP4-16G5E9R7 235 aaPredicted RBP3.23□□□□□ -1.89
LMO3-229ENST00000543721 IGKV2D-24A0A075B6R9 120 aa3.22□□□□□ -1.89
LMO3-229ENST00000543721 A6NED7 52 aa3.22□□□□□ -1.89
LMO3-229ENST00000543721 DEFB4AO15263 64 aa3.22□□□□□ -1.89
LMO3-229ENST00000543721 IGLV8-61A0A075B6I0 122 aa3.21□□□□□ -1.89
LMO3-229ENST00000543721 C16orf90A8MZG2 172 aa3.21□□□□□ -1.89
LMO3-229ENST00000543721 CASC2Q6XLA1 102 aa3.21□□□□□ -1.89
LMO3-229ENST00000543721 WFDC13Q8IUB5 93 aa3.21□□□□□ -1.89
LMO3-229ENST00000543721 LINC00476Q8WZB0 136 aa3.21□□□□□ -1.89
LMO3-229ENST00000543721 CDC42SE1Q9NRR8 79 aa3.21□□□□□ -1.89
LMO3-229ENST00000543721 ATMQ13315 3056 aa3.21□□□□□ -1.9
LMO3-229ENST00000543721 USP9YO00507 2555 aaPredicted RBP3.21□□□□□ -1.9
LMO3-229ENST00000543721 KRTAP29-1A8MX34 341 aaPredicted RBP3.21□□□□□ -1.9
LMO3-229ENST00000543721 LINC01556Q5JQF7 62 aa3.21□□□□□ -1.9
LMO3-229ENST00000543721 ITPR3Q14573 2671 aa3.21□□□□□ -1.9
LMO3-229ENST00000543721 A0A0A0MQY5 61 aa3.2□□□□□ -1.9
LMO3-229ENST00000543721 WFDC10BQ8IUB3 73 aa3.2□□□□□ -1.9
LMO3-229ENST00000543721 SPTSSBQ8NFR3 76 aa3.2□□□□□ -1.9
LMO3-229ENST00000543721 RBM12B-AS1Q9P1G2 102 aa3.2□□□□□ -1.9
LMO3-229ENST00000543721 IGLV7-46A0A075B6I9 117 aa3.2□□□□□ -1.9
LMO3-229ENST00000543721 C9orf163Q8N9P6 203 aa3.2□□□□□ -1.9
LMO3-229ENST00000543721 REG3GQ6UW15 175 aa3.19□□□□□ -1.9
LMO3-229ENST00000543721 C7orf65Q6ZTY9 151 aa3.19□□□□□ -1.9
LMO3-229ENST00000543721 LINC01558Q9Y6Z2 57 aa3.19□□□□□ -1.9
LMO3-229ENST00000543721 IGFL1Q6UW32 110 aa3.19□□□□□ -1.9
LMO3-229ENST00000543721 COA5Q86WW8 74 aa3.19□□□□□ -1.9
LMO3-229ENST00000543721 KRTAP1-3Q8IUG1 177 aa3.19□□□□□ -1.9
LMO3-229ENST00000543721 TP53AIP1Q9HCN2 124 aa3.19□□□□□ -1.9
LMO3-229ENST00000543721 HECTD1Q9ULT8 2610 aa3.19□□□□□ -1.9
LMO3-229ENST00000543721 A6NN06 94 aa3.19□□□□□ -1.9
LMO3-229ENST00000543721 A8MWP4 228 aa3.19□□□□□ -1.9
LMO3-229ENST00000543721 USP24Q9UPU5 2620 aa3.18□□□□□ -1.9
LMO3-229ENST00000543721 A0A087WSZ3 146 aa3.18□□□□□ -1.9
LMO3-229ENST00000543721 DMXL1Q9Y485 3027 aa3.18□□□□□ -1.9
LMO3-229ENST00000543721 KRTAP10-9P60411 292 aa3.18□□□□□ -1.9
LMO3-229ENST00000543721 TEP1Q99973 2627 aaKnown RBP3.18□□□□□ -1.9
LMO3-229ENST00000543721 PRB2P02812 416 aaPredicted RBP3.17□□□□□ -1.9
LMO3-229ENST00000543721 LCA10Q71F78 164 aa3.17□□□□□ -1.9
LMO3-229ENST00000543721 ASPMQ8IZT6 3477 aa3.17□□□□□ -1.9
LMO3-229ENST00000543721 ANKRD17O75179 2603 aaKnown RBP3.17□□□□□ -1.9
LMO3-229ENST00000543721 BAHCC1Q9P281 2608 aa3.16□□□□□ -1.9
LMO3-229ENST00000543721 DNAH10OSP0CZ25 163 aa3.16□□□□□ -1.9
LMO3-229ENST00000543721 CNBPP62633 177 aaKnown RBP3.16□□□□□ -1.9
LMO3-229ENST00000543721 ACANP16112 2415 aa3.16□□□□□ -1.9
LMO3-229ENST00000543721 FN1P02751 2386 aaKnown RBP3.16□□□□□ -1.9
LMO3-229ENST00000543721 DEFB116Q30KQ4 102 aa3.15□□□□□ -1.9
LMO3-229ENST00000543721 SPRR1BP22528 89 aa3.15□□□□□ -1.9
LMO3-229ENST00000543721 PLAC8Q9NZF1 115 aa3.15□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms