RNA–Protein interactions for RNA: ENST00000543473.1

SUDS3-204, Transcript of SDS3 homolog, SIN3A corepressor complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SUDS3, Length 4,897 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUDS3-204ENST00000543473 CSNK1G2-AS1Q8NCQ2 148 aa12.97□□□□□ -0.33
SUDS3-204ENST00000543473 A8MUN3 132 aa12.97□□□□□ -0.33
SUDS3-204ENST00000543473 Q8NAQ8 132 aa12.95□□□□□ -0.34
SUDS3-204ENST00000543473 RPL37AP61513 92 aaKnown RBP12.95□□□□□ -0.34
SUDS3-204ENST00000543473 LAMA1P25391 3075 aa12.94□□□□□ -0.34
SUDS3-204ENST00000543473 KRTAP1-3Q8IUG1 177 aa12.94□□□□□ -0.34
SUDS3-204ENST00000543473 OBSCN-AS1Q96MR7 158 aa12.91□□□□□ -0.34
SUDS3-204ENST00000543473 SPINK1P00995 79 aa12.91□□□□□ -0.34
SUDS3-204ENST00000543473 GIG44P09565 113 aaPredicted RBP12.9□□□□□ -0.34
SUDS3-204ENST00000543473 KCNQ1DNQ9H478 68 aa12.89□□□□□ -0.35
SUDS3-204ENST00000543473 A0A1B0GU69 56 aa12.87□□□□□ -0.35
SUDS3-204ENST00000543473 SERTAD4-AS1Q5TG53 156 aa12.87□□□□□ -0.35
SUDS3-204ENST00000543473 TEP1Q99973 2627 aaKnown RBP12.86□□□□□ -0.35
SUDS3-204ENST00000543473 FAM104AQ969W3 186 aa12.86□□□□□ -0.35
SUDS3-204ENST00000543473 VCANP13611 3396 aa12.85□□□□□ -0.35
SUDS3-204ENST00000543473 ACYP2P14621 99 aa12.85□□□□□ -0.35
SUDS3-204ENST00000543473 PRR34Q9NV39 138 aa12.85□□□□□ -0.35
SUDS3-204ENST00000543473 IGSF10Q6WRI0 2623 aa12.84□□□□□ -0.35
SUDS3-204ENST00000543473 Q8N377 158 aa12.84□□□□□ -0.35
SUDS3-204ENST00000543473 FAM168BA1KXE4 195 aa12.83□□□□□ -0.36
SUDS3-204ENST00000543473 EPM2AB3EWF7 344 aa12.83□□□□□ -0.36
SUDS3-204ENST00000543473 KRTAP1-1Q07627 177 aa12.83□□□□□ -0.36
SUDS3-204ENST00000543473 MOBPQ13875 183 aa12.82□□□□□ -0.36
SUDS3-204ENST00000543473 PHF5AQ7RTV0 110 aaKnown RBP12.82□□□□□ -0.36
SUDS3-204ENST00000543473 KRTAP10-3P60369 221 aa12.82□□□□□ -0.36
SUDS3-204ENST00000543473 CYP4F30PQ9H0H9 118 aa12.81□□□□□ -0.36
SUDS3-204ENST00000543473 IGLV1-50A0A075B6I6 118 aa12.8□□□□□ -0.36
SUDS3-204ENST00000543473 IGLV5-52A0A0A0MRZ9 124 aa12.8□□□□□ -0.36
SUDS3-204ENST00000543473 C19orf73Q9NVV2 129 aa12.8□□□□□ -0.36
SUDS3-204ENST00000543473 A8MWP4 228 aa12.8□□□□□ -0.36
SUDS3-204ENST00000543473 CELSR3Q9NYQ7 3312 aa12.8□□□□□ -0.36
SUDS3-204ENST00000543473 COL6A3P12111 3177 aa12.8□□□□□ -0.36
SUDS3-204ENST00000543473 IGKV2D-30A0A075B6S6 120 aa12.79□□□□□ -0.36
SUDS3-204ENST00000543473 IGKV2-30P06310 120 aa12.79□□□□□ -0.36
SUDS3-204ENST00000543473 COA5Q86WW8 74 aa12.79□□□□□ -0.36
SUDS3-204ENST00000543473 C1orf134Q5TEV5 83 aa12.79□□□□□ -0.36
SUDS3-204ENST00000543473 WIPF1O43516 503 aa12.78□□□□□ -0.36
SUDS3-204ENST00000543473 MDFIQ99750 246 aa12.78□□□□□ -0.36
SUDS3-204ENST00000543473 C16orf90A8MZG2 172 aa12.78□□□□□ -0.36
SUDS3-204ENST00000543473 LINC00612Q8N6U2 182 aa12.77□□□□□ -0.37
SUDS3-204ENST00000543473 IGFL1Q6UW32 110 aa12.75□□□□□ -0.37
SUDS3-204ENST00000543473 LINC00588Q9Y4M8 146 aa12.75□□□□□ -0.37
SUDS3-204ENST00000543473 C15orf56Q8N910 161 aa12.74□□□□□ -0.37
SUDS3-204ENST00000543473 DNAH10OSP0CZ25 163 aa12.73□□□□□ -0.37
SUDS3-204ENST00000543473 KRTAP10-11P60412 298 aa12.71□□□□□ -0.37
SUDS3-204ENST00000543473 ATP11AUNQ6ZP68 121 aa12.71□□□□□ -0.37
SUDS3-204ENST00000543473 PRR15Q8IV56 129 aa12.71□□□□□ -0.37
SUDS3-204ENST00000543473 DNAH14Q0VDD8 3507 aa12.71□□□□□ -0.38
SUDS3-204ENST00000543473 FRYQ5TBA9 3013 aa12.7□□□□□ -0.38
SUDS3-204ENST00000543473 CYSTM1Q9H1C7 97 aa12.7□□□□□ -0.38
SUDS3-204ENST00000543473 UNC79Q9P2D8 2635 aa12.7□□□□□ -0.38
SUDS3-204ENST00000543473 LOC101927531A0A1B0GV80 90 aa12.7□□□□□ -0.38
SUDS3-204ENST00000543473 A0A1W2PNM2 257 aa12.69□□□□□ -0.38
SUDS3-204ENST00000543473 CHTF8P0CG12 524 aa12.69□□□□□ -0.38
SUDS3-204ENST00000543473 C7orf65Q6ZTY9 151 aa12.69□□□□□ -0.38
SUDS3-204ENST00000543473 A0A0G2JQZ4 141 aa12.68□□□□□ -0.38
SUDS3-204ENST00000543473 A0A1W2PNN7 141 aa12.68□□□□□ -0.38
SUDS3-204ENST00000543473 C8orf87E5RJ46 101 aa12.67□□□□□ -0.38
SUDS3-204ENST00000543473 FRYLO94915 3013 aa12.66□□□□□ -0.38
SUDS3-204ENST00000543473 OCR1Q9BZK8 76 aa12.66□□□□□ -0.38
SUDS3-204ENST00000543473 TEX15Q9BXT5 2789 aa12.66□□□□□ -0.38
SUDS3-204ENST00000543473 CD164Q04900 197 aa12.65□□□□□ -0.38
SUDS3-204ENST00000543473 CHD6Q8TD26 2715 aa12.65□□□□□ -0.38
SUDS3-204ENST00000543473 K7EIL1 84 aa12.65□□□□□ -0.38
SUDS3-204ENST00000543473 Q5XG85 94 aa12.63□□□□□ -0.39
SUDS3-204ENST00000543473 MRPL34Q9BQ48 92 aaKnown RBP12.63□□□□□ -0.39
SUDS3-204ENST00000543473 STAB1Q9NY15 2570 aa12.61□□□□□ -0.39
SUDS3-204ENST00000543473 TNRC18O15417 2968 aaPredicted RBP12.61□□□□□ -0.39
SUDS3-204ENST00000543473 IGLV5-48A0A075B6I7 105 aa12.6□□□□□ -0.39
SUDS3-204ENST00000543473 FLNCQ14315 2725 aa12.6□□□□□ -0.39
SUDS3-204ENST00000543473 SETXQ7Z333 2677 aaKnown RBP12.59□□□□□ -0.39
SUDS3-204ENST00000543473 BOD1L1Q8NFC6 3051 aa12.59□□□□□ -0.39
SUDS3-204ENST00000543473 SPACA4Q8TDM5 124 aa12.59□□□□□ -0.39
SUDS3-204ENST00000543473 IGLV8-61A0A075B6I0 122 aa12.58□□□□□ -0.4
SUDS3-204ENST00000543473 LINC00313P59037 77 aa12.58□□□□□ -0.4
SUDS3-204ENST00000543473 COL6A5A8TX70 2615 aa12.58□□□□□ -0.4
SUDS3-204ENST00000543473 NBDYA0A0U1RRE5 68 aa12.57□□□□□ -0.4
SUDS3-204ENST00000543473 TLX1NBP0CAT3 122 aa12.57□□□□□ -0.4
SUDS3-204ENST00000543473 PLA2G2DQ9UNK4 145 aa12.57□□□□□ -0.4
SUDS3-204ENST00000543473 ATMQ13315 3056 aa12.57□□□□□ -0.4
SUDS3-204ENST00000543473 KTN1-AS1Q86SY8 53 aa12.56□□□□□ -0.4
SUDS3-204ENST00000543473 C8orf17Q9NRJ1 99 aa12.56□□□□□ -0.4
SUDS3-204ENST00000543473 DMXL2Q8TDJ6 3036 aa12.54□□□□□ -0.4
SUDS3-204ENST00000543473 SPANXA2-OT1Q8N9U9 137 aa12.54□□□□□ -0.4
SUDS3-204ENST00000543473 CR1P17927 2039 aa12.52□□□□□ -0.41
SUDS3-204ENST00000543473 FAM229AH3BQW9 127 aa12.52□□□□□ -0.41
SUDS3-204ENST00000543473 Q1T7F1 81 aa12.52□□□□□ -0.41
SUDS3-204ENST00000543473 FP248Q71RG6 208 aaPredicted RBP12.51□□□□□ -0.41
SUDS3-204ENST00000543473 EYSQ5T1H1 3165 aa12.51□□□□□ -0.41
SUDS3-204ENST00000543473 UQCR11O14957 56 aa12.5□□□□□ -0.41
SUDS3-204ENST00000543473 FREM2Q5SZK8 3169 aa12.49□□□□□ -0.41
SUDS3-204ENST00000543473 COL12A1Q99715 3063 aa12.47□□□□□ -0.41
SUDS3-204ENST00000543473 A0A1B0GVX0 72 aa12.47□□□□□ -0.41
SUDS3-204ENST00000543473 DSCR10P59022 87 aa12.46□□□□□ -0.41
SUDS3-204ENST00000543473 ADGRG4Q8IZF6 3080 aa12.46□□□□□ -0.42
SUDS3-204ENST00000543473 NOTCH1P46531 2555 aa12.45□□□□□ -0.42
SUDS3-204ENST00000543473 RTL8CO15255 209 aa12.45□□□□□ -0.42
SUDS3-204ENST00000543473 GCN1Q92616 2671 aaKnown RBP12.44□□□□□ -0.42
SUDS3-204ENST00000543473 Q8NDZ9 215 aa12.44□□□□□ -0.42
SUDS3-204ENST00000543473 WWC2-AS2Q96NR7 200 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms