RNA–Protein interactions for RNA: ENST00000543046.1

MDM2-229, Transcript of MDM2 proto-oncogene, humanhuman

TSL 3

Gene MDM2, Length 432 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM2-229ENST00000543046 DNAH12Q6ZR08 3092 aa2.33□□□□□ -2.04
MDM2-229ENST00000543046 IGKV3OR2-268A0A0C4DH90 116 aa2.33□□□□□ -2.04
MDM2-229ENST00000543046 B4DSR2 109 aa2.33□□□□□ -2.04
MDM2-229ENST00000543046 KRTAP10-1P60331 282 aa2.33□□□□□ -2.04
MDM2-229ENST00000543046 C1orf137Q5JT78 98 aa2.33□□□□□ -2.04
MDM2-229ENST00000543046 ADM2Q7Z4H4 148 aa2.33□□□□□ -2.04
MDM2-229ENST00000543046 CAMK2N2Q96S95 79 aa2.33□□□□□ -2.04
MDM2-229ENST00000543046 ZNF706Q9Y5V0 76 aaPredicted RBP2.33□□□□□ -2.04
MDM2-229ENST00000543046 WDR87Q6ZQQ6 2873 aa2.33□□□□□ -2.04
MDM2-229ENST00000543046 A0A1B0GVX0 72 aa2.32□□□□□ -2.04
MDM2-229ENST00000543046 HRES1P13985 223 aa2.32□□□□□ -2.04
MDM2-229ENST00000543046 ROMO1P60602 79 aa2.32□□□□□ -2.04
MDM2-229ENST00000543046 C1orf134Q5TEV5 83 aa2.32□□□□□ -2.04
MDM2-229ENST00000543046 UNQ6190/PRO20217Q6UXQ8 127 aa2.32□□□□□ -2.04
MDM2-229ENST00000543046 A8MWP4 228 aa2.31□□□□□ -2.04
MDM2-229ENST00000543046 LCE1CQ5T751 118 aa2.31□□□□□ -2.04
MDM2-229ENST00000543046 LCE1BQ5T7P3 118 aa2.31□□□□□ -2.04
MDM2-229ENST00000543046 CSAG1Q6PB30 78 aa2.31□□□□□ -2.04
MDM2-229ENST00000543046 SPTBN1Q01082 2364 aaKnown RBP2.3□□□□□ -2.04
MDM2-229ENST00000543046 DEFB109BQ30KR1 87 aa2.3□□□□□ -2.04
MDM2-229ENST00000543046 NOP10Q9NPE3 64 aaKnown RBP2.3□□□□□ -2.04
MDM2-229ENST00000543046 CACNA1BQ00975 2339 aa2.29□□□□□ -2.04
MDM2-229ENST00000543046 A0A087WSZ3 146 aa2.29□□□□□ -2.04
MDM2-229ENST00000543046 H3BUX3 64 aa2.29□□□□□ -2.04
MDM2-229ENST00000543046 UQCR11O14957 56 aa2.29□□□□□ -2.04
MDM2-229ENST00000543046 TLX1NBP0CAT3 122 aa2.29□□□□□ -2.04
MDM2-229ENST00000543046 ACYP2P14621 99 aa2.29□□□□□ -2.04
MDM2-229ENST00000543046 SPRR1AP35321 89 aa2.29□□□□□ -2.04
MDM2-229ENST00000543046 WFDC13Q8IUB5 93 aa2.29□□□□□ -2.04
MDM2-229ENST00000543046 C6orf48Q9UBA6 75 aa2.29□□□□□ -2.04
MDM2-229ENST00000543046 CEP350Q5VT06 3117 aa2.28□□□□□ -2.04
MDM2-229ENST00000543046 IGLV10-54A0A075B6I4 117 aa2.28□□□□□ -2.04
MDM2-229ENST00000543046 SPRR5A0A1B0GTR4 108 aa2.28□□□□□ -2.04
MDM2-229ENST00000543046 MIR22HGQ0VDD5 57 aa2.28□□□□□ -2.04
MDM2-229ENST00000543046 KRTAP25-1Q3LHN0 102 aa2.28□□□□□ -2.04
MDM2-229ENST00000543046 CLPSL2Q6UWE3 100 aa2.28□□□□□ -2.04
MDM2-229ENST00000543046 Q6ZRX8 168 aa2.28□□□□□ -2.04
MDM2-229ENST00000543046 DEFB105AQ8NG35 78 aa2.28□□□□□ -2.04
MDM2-229ENST00000543046 IGKV2-24A0A0C4DH68 120 aa2.27□□□□□ -2.05
MDM2-229ENST00000543046 KRTAP10-10P60014 251 aa2.27□□□□□ -2.05
MDM2-229ENST00000543046 DEFB116Q30KQ4 102 aa2.27□□□□□ -2.05
MDM2-229ENST00000543046 WFDC10BQ8IUB3 73 aa2.27□□□□□ -2.05
MDM2-229ENST00000543046 PRO3102Q9H379 93 aa2.27□□□□□ -2.05
MDM2-229ENST00000543046 LINC00472Q9H8W2 130 aa2.27□□□□□ -2.05
MDM2-229ENST00000543046 PRO0255Q9UI72 69 aa2.27□□□□□ -2.05
MDM2-229ENST00000543046 CEP250Q9BV73 2442 aa2.27□□□□□ -2.05
MDM2-229ENST00000543046 A0A1B0GU69 56 aa2.26□□□□□ -2.05
MDM2-229ENST00000543046 LY6EQ16553 131 aa2.26□□□□□ -2.05
MDM2-229ENST00000543046 BRD3OSQ6XYD6 125 aa2.26□□□□□ -2.05
MDM2-229ENST00000543046 C8orf17Q9NRJ1 99 aa2.26□□□□□ -2.05
MDM2-229ENST00000543046 COL6A3P12111 3177 aa2.26□□□□□ -2.05
MDM2-229ENST00000543046 PCNX1Q96RV3 2341 aa2.25□□□□□ -2.05
MDM2-229ENST00000543046 PKDREJQ9NTG1 2253 aa2.25□□□□□ -2.05
MDM2-229ENST00000543046 UTRNP46939 3433 aa2.25□□□□□ -2.05
MDM2-229ENST00000543046 SDK1Q7Z5N4 2213 aa2.25□□□□□ -2.05
MDM2-229ENST00000543046 MMP24-AS1A0A0U1RRL7 71 aa2.25□□□□□ -2.05
MDM2-229ENST00000543046 ANGP03950 147 aaKnown RBP2.25□□□□□ -2.05
MDM2-229ENST00000543046 IGFL1Q6UW32 110 aa2.25□□□□□ -2.05
MDM2-229ENST00000543046 DMAC1Q96GE9 116 aa2.25□□□□□ -2.05
MDM2-229ENST00000543046 ALMS1Q8TCU4 4167 aa2.25□□□□□ -2.05
MDM2-229ENST00000543046 SPTBN2O15020 2390 aa2.24□□□□□ -2.05
MDM2-229ENST00000543046 APC2O95996 2303 aa2.24□□□□□ -2.05
MDM2-229ENST00000543046 ROS1P08922 2347 aa2.24□□□□□ -2.05
MDM2-229ENST00000543046 MSMBP08118 114 aa2.24□□□□□ -2.05
MDM2-229ENST00000543046 PCOTHQ58A44 107 aa2.24□□□□□ -2.05
MDM2-229ENST00000543046 LELP1Q5T871 98 aa2.24□□□□□ -2.05
MDM2-229ENST00000543046 Q5W150 140 aa2.24□□□□□ -2.05
MDM2-229ENST00000543046 C4orf3Q8WVX3 66 aa2.24□□□□□ -2.05
MDM2-229ENST00000543046 SZT2Q5T011 3432 aa2.24□□□□□ -2.05
MDM2-229ENST00000543046 CUL9Q8IWT3 2517 aa2.24□□□□□ -2.05
MDM2-229ENST00000543046 WNK1Q9H4A3 2382 aa2.23□□□□□ -2.05
MDM2-229ENST00000543046 EP400Q96L91 3159 aa2.23□□□□□ -2.05
MDM2-229ENST00000543046 IGLV7-43P04211 117 aa2.23□□□□□ -2.05
MDM2-229ENST00000543046 SPRR1BP22528 89 aa2.23□□□□□ -2.05
MDM2-229ENST00000543046 LINC00483Q53H64 154 aa2.23□□□□□ -2.05
MDM2-229ENST00000543046 DNAH14Q0VDD8 3507 aa2.22□□□□□ -2.05
MDM2-229ENST00000543046 P0C880 135 aa2.22□□□□□ -2.05
MDM2-229ENST00000543046 RPL37AP61513 92 aaKnown RBP2.22□□□□□ -2.05
MDM2-229ENST00000543046 KRTAP26-1Q6PEX3 210 aa2.22□□□□□ -2.05
MDM2-229ENST00000543046 CNOT1A5YKK6 2376 aaKnown RBP2.22□□□□□ -2.05
MDM2-229ENST00000543046 GPR179Q6PRD1 2367 aa2.21□□□□□ -2.06
MDM2-229ENST00000543046 TNRC18O15417 2968 aaPredicted RBP2.21□□□□□ -2.06
MDM2-229ENST00000543046 C10orf99Q6UWK7 81 aa2.21□□□□□ -2.06
MDM2-229ENST00000543046 UNC80Q8N2C7 3258 aa2.21□□□□□ -2.06
MDM2-229ENST00000543046 TPRP12270 2363 aaKnown RBP2.21□□□□□ -2.06
MDM2-229ENST00000543046 ZZEF1O43149 2961 aa2.2□□□□□ -2.06
MDM2-229ENST00000543046 COL6A6A6NMZ7 2263 aa2.2□□□□□ -2.06
MDM2-229ENST00000543046 RANBP2P49792 3224 aaKnown RBP2.2□□□□□ -2.06
MDM2-229ENST00000543046 A8MUU9 505 aa2.2□□□□□ -2.06
MDM2-229ENST00000543046 CIRBP-AS1Q8TBR5 109 aa2.2□□□□□ -2.06
MDM2-229ENST00000543046 MRPL34Q9BQ48 92 aaKnown RBP2.2□□□□□ -2.06
MDM2-229ENST00000543046 NBEAQ8NFP9 2946 aa2.19□□□□□ -2.06
MDM2-229ENST00000543046 NUPR2A6NF83 97 aa2.19□□□□□ -2.06
MDM2-229ENST00000543046 DEFB130BP0DP73 79 aa2.19□□□□□ -2.06
MDM2-229ENST00000543046 DEFB130AP0DP74 79 aa2.19□□□□□ -2.06
MDM2-229ENST00000543046 MGAQ8IWI9 3026 aa2.19□□□□□ -2.06
MDM2-229ENST00000543046 DEFB136Q30KP8 78 aa2.18□□□□□ -2.06
MDM2-229ENST00000543046 LINC00304Q8N9R0 145 aa2.18□□□□□ -2.06
MDM2-229ENST00000543046 C20orf166-AS1Q96NR2 134 aa2.18□□□□□ -2.06
MDM2-229ENST00000543046 EP300Q09472 2414 aaPredicted RBP2.18□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms