RNA–Protein interactions for RNA: ENST00000542555.1

CLPB-211, Transcript of ClpB homolog, mitochondrial AAA ATPase chaperonin, human

TSL 2

Gene CLPB, Length 421 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CLPB-211	ENST00000542555	LCE3C	Q5T5A8	94 aa		4.27	□□□□□ -1.73
CLPB-211	ENST00000542555		Q6Q795	121 aa		4.27	□□□□□ -1.73
CLPB-211	ENST00000542555		A0A0U1RRA0	63 aa		4.26	□□□□□ -1.73
CLPB-211	ENST00000542555	ADCYAP1	P18509	176 aa		4.26	□□□□□ -1.73
CLPB-211	ENST00000542555	SPRR1A	P35321	89 aa		4.26	□□□□□ -1.73
CLPB-211	ENST00000542555	SLC25A34	Q6PIV7	304 aa		4.26	□□□□□ -1.73
CLPB-211	ENST00000542555	SMCO4	Q9NRQ5	59 aa		4.26	□□□□□ -1.73
CLPB-211	ENST00000542555	LINC00587	B1AMM8	73 aa		4.25	□□□□□ -1.73
CLPB-211	ENST00000542555	MT-ND4L	P03901	98 aa		4.25	□□□□□ -1.73
CLPB-211	ENST00000542555	MEIG1	Q5JSS6	88 aa		4.25	□□□□□ -1.73
CLPB-211	ENST00000542555	TMEM170B	Q5T4T1	132 aa		4.25	□□□□□ -1.73
CLPB-211	ENST00000542555	FA2H	Q7L5A8	372 aa		4.25	□□□□□ -1.73
CLPB-211	ENST00000542555		Q8NDZ9	215 aa		4.25	□□□□□ -1.73
CLPB-211	ENST00000542555	LINC00846	Q9NV44	126 aa		4.25	□□□□□ -1.73
CLPB-211	ENST00000542555	TRBV10-3	A0A0K0K1G6	114 aa		4.24	□□□□□ -1.73
CLPB-211	ENST00000542555	IGLC3	P0DOY3	106 aa		4.24	□□□□□ -1.73
CLPB-211	ENST00000542555	HINT1	P49773	126 aa	Predicted RBP	4.24	□□□□□ -1.73
CLPB-211	ENST00000542555	HRCT1	Q6UXD1	115 aa		4.24	□□□□□ -1.73
CLPB-211	ENST00000542555	MAP1LC3C	Q9BXW4	147 aa		4.24	□□□□□ -1.73
CLPB-211	ENST00000542555	ZNF22	P17026	224 aa	Predicted RBP	4.23	□□□□□ -1.73
CLPB-211	ENST00000542555	KRTAP4-16	G5E9R7	235 aa	Predicted RBP	4.22	□□□□□ -1.73
CLPB-211	ENST00000542555	ERC2-IT1	O76042	136 aa		4.22	□□□□□ -1.73
CLPB-211	ENST00000542555	DDT	P30046	118 aa		4.22	□□□□□ -1.73
CLPB-211	ENST00000542555	RPL37	P61927	97 aa	Known RBP	4.22	□□□□□ -1.73
CLPB-211	ENST00000542555	S100A7L2	Q5SY68	101 aa		4.22	□□□□□ -1.73
CLPB-211	ENST00000542555		Q6ZRX8	168 aa		4.22	□□□□□ -1.73
CLPB-211	ENST00000542555	C5orf52	A6NGY3	159 aa		4.21	□□□□□ -1.74
CLPB-211	ENST00000542555	SMIM13	P0DJ93	91 aa		4.21	□□□□□ -1.74
CLPB-211	ENST00000542555	HERV-K104	P63124	156 aa		4.21	□□□□□ -1.74
CLPB-211	ENST00000542555	KIAA1644	Q3SXP7	199 aa		4.21	□□□□□ -1.74
CLPB-211	ENST00000542555	MIR7-3HG	Q8N6C7	128 aa		4.21	□□□□□ -1.74
CLPB-211	ENST00000542555	LAMTOR3	Q9UHA4	124 aa		4.21	□□□□□ -1.74
CLPB-211	ENST00000542555	CBY1	Q9Y3M2	126 aa		4.21	□□□□□ -1.74
CLPB-211	ENST00000542555		C9JQL5	133 aa		4.2	□□□□□ -1.74
CLPB-211	ENST00000542555	COMMD7	Q86VX2	200 aa		4.2	□□□□□ -1.74
CLPB-211	ENST00000542555	MIEN1	Q9BRT3	115 aa		4.2	□□□□□ -1.74
CLPB-211	ENST00000542555		H7C2G1	150 aa		4.19	□□□□□ -1.74
CLPB-211	ENST00000542555	BAGE3	Q86Y29	109 aa		4.19	□□□□□ -1.74
CLPB-211	ENST00000542555		Q9BRP9	147 aa		4.19	□□□□□ -1.74
CLPB-211	ENST00000542555	TRBV10-2	A0A0K0K1G8	114 aa		4.18	□□□□□ -1.74
CLPB-211	ENST00000542555	C11orf86	A6NJI1	115 aa		4.18	□□□□□ -1.74
CLPB-211	ENST00000542555	CD164	Q04900	197 aa		4.18	□□□□□ -1.74
CLPB-211	ENST00000542555	ATP11AUN	Q6ZP68	121 aa		4.18	□□□□□ -1.74
CLPB-211	ENST00000542555	PRO1933	Q9H354	126 aa		4.18	□□□□□ -1.74
CLPB-211	ENST00000542555	TRAV23DV6	A0A075B6W5	121 aa		4.17	□□□□□ -1.74
CLPB-211	ENST00000542555	MYMX	A0A1B0GTQ4	84 aa		4.17	□□□□□ -1.74
CLPB-211	ENST00000542555	C20orf202	A1L168	122 aa		4.17	□□□□□ -1.74
CLPB-211	ENST00000542555	LINC01546	A6NGU7	62 aa		4.17	□□□□□ -1.74
CLPB-211	ENST00000542555	SPANXB1	Q9NS25	103 aa	Predicted RBP	4.17	□□□□□ -1.74
CLPB-211	ENST00000542555	TRBV20-1	A0A075B6N2	111 aa		4.16	□□□□□ -1.74
CLPB-211	ENST00000542555	HBD	P02042	147 aa		4.16	□□□□□ -1.74
CLPB-211	ENST00000542555	S100P	P25815	95 aa		4.16	□□□□□ -1.74
CLPB-211	ENST00000542555	ST20-AS1	Q8NBB2	130 aa		4.16	□□□□□ -1.74
CLPB-211	ENST00000542555	CHTOP	Q9Y3Y2	248 aa	Known RBP	4.16	□□□□□ -1.74
CLPB-211	ENST00000542555	ZNF73	O43830	326 aa	Predicted RBP	4.15	□□□□□ -1.75
CLPB-211	ENST00000542555	TCL1B	O95988	128 aa		4.15	□□□□□ -1.75
CLPB-211	ENST00000542555	IFITM2	Q01629	132 aa		4.15	□□□□□ -1.75
CLPB-211	ENST00000542555	TAL2	Q16559	108 aa		4.15	□□□□□ -1.75
CLPB-211	ENST00000542555	COX19	Q49B96	90 aa		4.15	□□□□□ -1.75
CLPB-211	ENST00000542555	KRTAP5-2	Q701N4	177 aa		4.15	□□□□□ -1.75
CLPB-211	ENST00000542555	TMEM223	A0PJW6	202 aa		4.14	□□□□□ -1.75
CLPB-211	ENST00000542555	AKR1D1	P51857	326 aa		4.14	□□□□□ -1.75
CLPB-211	ENST00000542555	FABP9	Q0Z7S8	132 aa		4.14	□□□□□ -1.75
CLPB-211	ENST00000542555	C10orf91	Q5T1B1	145 aa		4.14	□□□□□ -1.75
CLPB-211	ENST00000542555	DHRS4-AS1	Q9P1J3	65 aa		4.14	□□□□□ -1.75
CLPB-211	ENST00000542555	LINC00614	P0C842	121 aa		4.13	□□□□□ -1.75
CLPB-211	ENST00000542555	SPRR1B	P22528	89 aa		4.13	□□□□□ -1.75
CLPB-211	ENST00000542555	LCE3A	Q5TA76	89 aa		4.13	□□□□□ -1.75
CLPB-211	ENST00000542555	C1orf195	Q5TG92	126 aa		4.13	□□□□□ -1.75
CLPB-211	ENST00000542555		Q5XG85	94 aa		4.13	□□□□□ -1.75
CLPB-211	ENST00000542555	SEC11C	Q9BY50	192 aa		4.13	□□□□□ -1.75
CLPB-211	ENST00000542555	NDUFC2	O95298	119 aa		4.12	□□□□□ -1.75
CLPB-211	ENST00000542555		Q1RN00	199 aa		4.12	□□□□□ -1.75
CLPB-211	ENST00000542555	DEFB105A	Q8NG35	78 aa		4.12	□□□□□ -1.75
CLPB-211	ENST00000542555	LOC107984156	A0A0G2JMH3	177 aa		4.11	□□□□□ -1.75
CLPB-211	ENST00000542555	RHEB	Q15382	184 aa		4.11	□□□□□ -1.75
CLPB-211	ENST00000542555	SMIM29	Q86T20	159 aa		4.11	□□□□□ -1.75
CLPB-211	ENST00000542555	PCP2	Q8IVA1	136 aa		4.11	□□□□□ -1.75
CLPB-211	ENST00000542555	ARL17A	Q8IVW1	177 aa		4.11	□□□□□ -1.75
CLPB-211	ENST00000542555	hCG_2014768	A0A024R1R8	64 aa		4.1	□□□□□ -1.75
CLPB-211	ENST00000542555	TEX49	A0A1B0GTD5	131 aa		4.1	□□□□□ -1.75
CLPB-211	ENST00000542555	OR13C6P	Q8NH95	151 aa		4.1	□□□□□ -1.75
CLPB-211	ENST00000542555	TRAV12-1	A0A0B4J245	112 aa		4.09	□□□□□ -1.75
CLPB-211	ENST00000542555	FAM236D	A0A1B0GTK5	79 aa		4.09	□□□□□ -1.75
CLPB-211	ENST00000542555	FAM236C	P0DP71	79 aa		4.09	□□□□□ -1.75
CLPB-211	ENST00000542555	PMCHL1	Q16048	86 aa		4.09	□□□□□ -1.75
CLPB-211	ENST00000542555		A0A096LNJ9	63 aa		4.08	□□□□□ -1.76
CLPB-211	ENST00000542555	KRTAP10-10	P60014	251 aa		4.08	□□□□□ -1.76
CLPB-211	ENST00000542555	SYNE2	Q8WXH0	6885 aa	Known RBP	4.07	□□□□□ -1.76
CLPB-211	ENST00000542555	LGALS3	P17931	250 aa	Known RBP	4.07	□□□□□ -1.76
CLPB-211	ENST00000542555	COX7B	P24311	80 aa		4.07	□□□□□ -1.76
CLPB-211	ENST00000542555	NMU	P48645	174 aa		4.07	□□□□□ -1.76
CLPB-211	ENST00000542555	HERVK_113	P61574	105 aa		4.07	□□□□□ -1.76
CLPB-211	ENST00000542555	C6orf99	Q4VX62	202 aa		4.07	□□□□□ -1.76
CLPB-211	ENST00000542555		Q75L30	129 aa		4.07	□□□□□ -1.76
CLPB-211	ENST00000542555	IFI27L1	Q96BM0	104 aa		4.07	□□□□□ -1.76
CLPB-211	ENST00000542555	FCGBP	Q9Y6R7	5405 aa	Predicted RBP	4.07	□□□□□ -1.76
CLPB-211	ENST00000542555	MACF1	Q9UPN3	7388 aa	Known RBP	4.07	□□□□□ -1.76
CLPB-211	ENST00000542555	SSPO	A2VEC9	5147 aa		4.07	□□□□□ -1.76
CLPB-211	ENST00000542555	LEPROT	O15243	131 aa		4.06	□□□□□ -1.76

Retrieved 100 of 20,778 RNA–protein pairs in 108 ms