RNA–Protein interactions for RNA: ENST00000542002.5

YBX3-212, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 952 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-212ENST00000542002 PCP2Q8IVA1 136 aa5.74□□□□□ -1.49
YBX3-212ENST00000542002 LINC00308Q8TCZ7 52 aa5.74□□□□□ -1.49
YBX3-212ENST00000542002 TRBV10-2A0A0K0K1G8 114 aa5.73□□□□□ -1.49
YBX3-212ENST00000542002 C20orf202A1L168 122 aa5.73□□□□□ -1.49
YBX3-212ENST00000542002 PRYO14603 147 aa5.73□□□□□ -1.49
YBX3-212ENST00000542002 TIMM17BO60830 172 aa5.73□□□□□ -1.49
YBX3-212ENST00000542002 IGLV6-57P01721 117 aa5.73□□□□□ -1.49
YBX3-212ENST00000542002 LRP2P98164 4655 aa5.73□□□□□ -1.49
YBX3-212ENST00000542002 C5orf52A6NGY3 159 aa5.72□□□□□ -1.49
YBX3-212ENST00000542002 S100A2P29034 98 aa5.72□□□□□ -1.49
YBX3-212ENST00000542002 DDTP30046 118 aa5.72□□□□□ -1.49
YBX3-212ENST00000542002 LINC00337Q8N6G1 96 aa5.72□□□□□ -1.49
YBX3-212ENST00000542002 HIGD2AQ9BW72 106 aa5.72□□□□□ -1.49
YBX3-212ENST00000542002 SPANXB1Q9NS25 103 aaPredicted RBP5.72□□□□□ -1.49
YBX3-212ENST00000542002 LPAP08519 4548 aa5.71□□□□□ -1.49
YBX3-212ENST00000542002 B5MCH6 92 aa5.71□□□□□ -1.5
YBX3-212ENST00000542002 S100A6P06703 90 aa5.71□□□□□ -1.5
YBX3-212ENST00000542002 CRYGAP11844 174 aa5.71□□□□□ -1.5
YBX3-212ENST00000542002 RPL13AP40429 203 aaKnown RBP5.71□□□□□ -1.5
YBX3-212ENST00000542002 SMCR5Q8TEV8 140 aa5.71□□□□□ -1.5
YBX3-212ENST00000542002 MIEN1Q9BRT3 115 aa5.71□□□□□ -1.5
YBX3-212ENST00000542002 ERC2-IT1O76042 136 aa5.7□□□□□ -1.5
YBX3-212ENST00000542002 Q9BRP9 147 aa5.7□□□□□ -1.5
YBX3-212ENST00000542002 KRTAP4-9Q9BYQ8 210 aa5.7□□□□□ -1.5
YBX3-212ENST00000542002 FAM229BQ4G0N7 80 aa5.69□□□□□ -1.5
YBX3-212ENST00000542002 S100A7L2Q5SY68 101 aa5.69□□□□□ -1.5
YBX3-212ENST00000542002 TYMSOSQ8TAI1 123 aa5.69□□□□□ -1.5
YBX3-212ENST00000542002 SPRR4Q96PI1 79 aa5.69□□□□□ -1.5
YBX3-212ENST00000542002 SPANXCQ9NY87 97 aa5.69□□□□□ -1.5
YBX3-212ENST00000542002 ETDCA0A1B0GVM5 59 aa5.68□□□□□ -1.5
YBX3-212ENST00000542002 TSPAN13O95857 204 aa5.68□□□□□ -1.5
YBX3-212ENST00000542002 SCGB1D4Q6XE38 83 aa5.68□□□□□ -1.5
YBX3-212ENST00000542002 C3orf22Q8N5N4 141 aa5.68□□□□□ -1.5
YBX3-212ENST00000542002 SPANXDQ9BXN6 97 aa5.68□□□□□ -1.5
YBX3-212ENST00000542002 TRAV23DV6A0A075B6W5 121 aa5.67□□□□□ -1.5
YBX3-212ENST00000542002 A6NJY4 79 aa5.67□□□□□ -1.5
YBX3-212ENST00000542002 MUSTN1Q8IVN3 82 aa5.67□□□□□ -1.5
YBX3-212ENST00000542002 ZNF73O43830 326 aaPredicted RBP5.66□□□□□ -1.5
YBX3-212ENST00000542002 SCGB1D1O95968 90 aa5.66□□□□□ -1.5
YBX3-212ENST00000542002 AKR1D1P51857 326 aa5.66□□□□□ -1.5
YBX3-212ENST00000542002 Q6ZRX8 168 aa5.66□□□□□ -1.5
YBX3-212ENST00000542002 PPDPFQ9H3Y8 114 aa5.66□□□□□ -1.5
YBX3-212ENST00000542002 OR13C6PQ8NH95 151 aa5.65□□□□□ -1.5
YBX3-212ENST00000542002 RNF213Q63HN8 5207 aa5.65□□□□□ -1.51
YBX3-212ENST00000542002 IFITM1P13164 125 aa5.64□□□□□ -1.51
YBX3-212ENST00000542002 S100A12P80511 92 aa5.64□□□□□ -1.51
YBX3-212ENST00000542002 LINC00483Q53H64 154 aa5.64□□□□□ -1.51
YBX3-212ENST00000542002 GAGE2AQ6NT46 116 aa5.63□□□□□ -1.51
YBX3-212ENST00000542002 Q6ZVH6 145 aa5.63□□□□□ -1.51
YBX3-212ENST00000542002 LINC00518Q8N0U6 118 aa5.63□□□□□ -1.51
YBX3-212ENST00000542002 ST20-AS1Q8NBB2 130 aa5.63□□□□□ -1.51
YBX3-212ENST00000542002 HSBP1L1C9JCN9 74 aa5.62□□□□□ -1.51
YBX3-212ENST00000542002 LINC00304Q8N9R0 145 aa5.62□□□□□ -1.51
YBX3-212ENST00000542002 KRTAP4-2Q9BYR5 136 aa5.62□□□□□ -1.51
YBX3-212ENST00000542002 ZNF706Q9Y5V0 76 aaPredicted RBP5.62□□□□□ -1.51
YBX3-212ENST00000542002 C6orf99Q4VX62 202 aa5.61□□□□□ -1.51
YBX3-212ENST00000542002 COX8AP10176 69 aa5.6□□□□□ -1.51
YBX3-212ENST00000542002 JOSD1Q15040 202 aaPredicted RBP5.6□□□□□ -1.51
YBX3-212ENST00000542002 PRR4Q16378 134 aa5.6□□□□□ -1.51
YBX3-212ENST00000542002 A6NDN8 102 aa5.59□□□□□ -1.51
YBX3-212ENST00000542002 ELOF1P60002 83 aaKnown RBP5.59□□□□□ -1.51
YBX3-212ENST00000542002 Q8NBF4 154 aa5.59□□□□□ -1.51
YBX3-212ENST00000542002 COPS9Q8WXC6 57 aa5.59□□□□□ -1.51
YBX3-212ENST00000542002 C14orf144Q96I85 54 aa5.59□□□□□ -1.51
YBX3-212ENST00000542002 RETNLBQ9BQ08 111 aa5.59□□□□□ -1.51
YBX3-212ENST00000542002 IGLV9-49A0A0B4J1Y8 123 aa5.58□□□□□ -1.52
YBX3-212ENST00000542002 A4D1N5 150 aa5.58□□□□□ -1.52
YBX3-212ENST00000542002 COX7BP24311 80 aa5.58□□□□□ -1.52
YBX3-212ENST00000542002 HINT1P49773 126 aaPredicted RBP5.58□□□□□ -1.52
YBX3-212ENST00000542002 SMIM11BQ8TCY0 68 aa5.58□□□□□ -1.52
YBX3-212ENST00000542002 PAM16Q9Y3D7 125 aa5.58□□□□□ -1.52
YBX3-212ENST00000542002 CBY1Q9Y3M2 126 aa5.58□□□□□ -1.52
YBX3-212ENST00000542002 DLEU1O43261 78 aa5.57□□□□□ -1.52
YBX3-212ENST00000542002 MOBPQ13875 183 aa5.57□□□□□ -1.52
YBX3-212ENST00000542002 DHRS4-AS1Q9P1J3 65 aa5.57□□□□□ -1.52
YBX3-212ENST00000542002 TRAV13-2A0A0B4J235 113 aa5.56□□□□□ -1.52
YBX3-212ENST00000542002 TRBV7-6A0A0J9YX20 115 aa5.56□□□□□ -1.52
YBX3-212ENST00000542002 SPATA45Q537H7 98 aa5.56□□□□□ -1.52
YBX3-212ENST00000542002 SPRR1BP22528 89 aa5.55□□□□□ -1.52
YBX3-212ENST00000542002 PYY3Q5JQD4 70 aa5.55□□□□□ -1.52
YBX3-212ENST00000542002 C2orf91Q6ZV80 131 aa5.55□□□□□ -1.52
YBX3-212ENST00000542002 C12orf57Q99622 126 aa5.55□□□□□ -1.52
YBX3-212ENST00000542002 TMA7Q9Y2S6 64 aaKnown RBP5.55□□□□□ -1.52
YBX3-212ENST00000542002 LINC01547P58512 204 aaPredicted RBP5.54□□□□□ -1.52
YBX3-212ENST00000542002 SPAG11AQ6PDA7 123 aa5.54□□□□□ -1.52
YBX3-212ENST00000542002 SSBP3-AS1Q7Z2R9 100 aa5.54□□□□□ -1.52
YBX3-212ENST00000542002 DEFB105AQ8NG35 78 aa5.54□□□□□ -1.52
YBX3-212ENST00000542002 HIST1H4GQ99525 98 aa5.54□□□□□ -1.52
YBX3-212ENST00000542002 A0A1B0GWB2 263 aa5.53□□□□□ -1.52
YBX3-212ENST00000542002 CTAG1AP78358 180 aa5.53□□□□□ -1.52
YBX3-212ENST00000542002 SMIM29Q86T20 159 aa5.53□□□□□ -1.52
YBX3-212ENST00000542002 VAMP8Q9BV40 100 aa5.53□□□□□ -1.52
YBX3-212ENST00000542002 MUC2Q02817 5179 aa5.52□□□□□ -1.53
YBX3-212ENST00000542002 CFC1BP0CG36 223 aa5.52□□□□□ -1.53
YBX3-212ENST00000542002 CFC1P0CG37 223 aa5.52□□□□□ -1.53
YBX3-212ENST00000542002 HIGD1BQ9P298 99 aa5.52□□□□□ -1.53
YBX3-212ENST00000542002 SPINK1P00995 79 aa5.51□□□□□ -1.53
YBX3-212ENST00000542002 TAL2Q16559 108 aa5.51□□□□□ -1.53
YBX3-212ENST00000542002 C9orf153Q5TBE3 101 aa5.51□□□□□ -1.53
YBX3-212ENST00000542002 SLC25A34Q6PIV7 304 aa5.51□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 173.7 ms