RNA–Protein interactions for RNA: ENST00000541363.5

HMGA2-210, Transcript of high mobility group AT-hook 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HMGA2, Length 8,094 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-210ENST00000541363 LITAFQ99732 161 aa10.14□□□□□ -0.79
HMGA2-210ENST00000541363 Q8N377 158 aa10.14□□□□□ -0.79
HMGA2-210ENST00000541363 ZFYVE26Q68DK2 2539 aa10.13□□□□□ -0.79
HMGA2-210ENST00000541363 C15orf56Q8N910 161 aa10.12□□□□□ -0.79
HMGA2-210ENST00000541363 TLN1Q9Y490 2541 aaKnown RBP10.12□□□□□ -0.79
HMGA2-210ENST00000541363 CR1P17927 2039 aa10.09□□□□□ -0.79
HMGA2-210ENST00000541363 PLA2G2DQ9UNK4 145 aa10.07□□□□□ -0.8
HMGA2-210ENST00000541363 A0A1B0GU33 70 aa10.06□□□□□ -0.8
HMGA2-210ENST00000541363 IGLV7-43P04211 117 aa10.06□□□□□ -0.8
HMGA2-210ENST00000541363 Q6ZSA8 131 aa10.05□□□□□ -0.8
HMGA2-210ENST00000541363 HRES1P13985 223 aa10.04□□□□□ -0.8
HMGA2-210ENST00000541363 SMR3BP02814 79 aaPredicted RBP10.04□□□□□ -0.8
HMGA2-210ENST00000541363 H3BS24 57 aa10.03□□□□□ -0.8
HMGA2-210ENST00000541363 M0R2T5 61 aa10.03□□□□□ -0.8
HMGA2-210ENST00000541363 ZNF462Q96JM2 2506 aa10.03□□□□□ -0.8
HMGA2-210ENST00000541363 KRTAP24-1Q3LI83 254 aa10.03□□□□□ -0.8
HMGA2-210ENST00000541363 C9orf163Q8N9P6 203 aa10.03□□□□□ -0.8
HMGA2-210ENST00000541363 ANAPC11Q9NYG5 84 aa10.02□□□□□ -0.81
HMGA2-210ENST00000541363 A0A0G2JQZ4 141 aa10.02□□□□□ -0.81
HMGA2-210ENST00000541363 A0A1W2PNN7 141 aa10.02□□□□□ -0.81
HMGA2-210ENST00000541363 WDR87Q6ZQQ6 2873 aa10.01□□□□□ -0.81
HMGA2-210ENST00000541363 TLX1NBP0CAT3 122 aa10□□□□□ -0.81
HMGA2-210ENST00000541363 TLN2Q9Y4G6 2542 aa10□□□□□ -0.81
HMGA2-210ENST00000541363 A0A087WTM6 91 aa9.99□□□□□ -0.81
HMGA2-210ENST00000541363 PRR26Q8N8Z3 221 aa9.99□□□□□ -0.81
HMGA2-210ENST00000541363 DMAC1Q96GE9 116 aa9.98□□□□□ -0.81
HMGA2-210ENST00000541363 SPRR4Q96PI1 79 aa9.98□□□□□ -0.81
HMGA2-210ENST00000541363 PIEZO2Q9H5I5 2752 aa9.98□□□□□ -0.81
HMGA2-210ENST00000541363 PSORS1C2Q9UIG4 136 aa9.96□□□□□ -0.82
HMGA2-210ENST00000541363 ANKRD17O75179 2603 aaKnown RBP9.95□□□□□ -0.82
HMGA2-210ENST00000541363 Q75L30 129 aa9.95□□□□□ -0.82
HMGA2-210ENST00000541363 COL4A2P08572 1712 aa9.95□□□□□ -0.82
HMGA2-210ENST00000541363 PRR34Q9NV39 138 aa9.93□□□□□ -0.82
HMGA2-210ENST00000541363 ABCA12Q86UK0 2595 aa9.93□□□□□ -0.82
HMGA2-210ENST00000541363 S4R3F8 94 aa9.9□□□□□ -0.82
HMGA2-210ENST00000541363 SPINK7P58062 85 aa9.9□□□□□ -0.82
HMGA2-210ENST00000541363 IGLV7-46A0A075B6I9 117 aa9.87□□□□□ -0.83
HMGA2-210ENST00000541363 JMJD1CQ15652 2540 aa9.85□□□□□ -0.83
HMGA2-210ENST00000541363 A0A1W2PNM2 257 aa9.85□□□□□ -0.83
HMGA2-210ENST00000541363 POLQO75417 2590 aa9.84□□□□□ -0.83
HMGA2-210ENST00000541363 CSAG1Q6PB30 78 aa9.83□□□□□ -0.84
HMGA2-210ENST00000541363 KRTAP10-11P60412 298 aa9.83□□□□□ -0.84
HMGA2-210ENST00000541363 K7EIL1 84 aa9.83□□□□□ -0.84
HMGA2-210ENST00000541363 CNBPP62633 177 aaKnown RBP9.82□□□□□ -0.84
HMGA2-210ENST00000541363 EIF4EBP3O60516 100 aaPredicted RBP9.82□□□□□ -0.84
HMGA2-210ENST00000541363 PKD1L2Q7Z442 2459 aa9.82□□□□□ -0.84
HMGA2-210ENST00000541363 OCR1Q9BZK8 76 aa9.81□□□□□ -0.84
HMGA2-210ENST00000541363 LINC00612Q8N6U2 182 aa9.78□□□□□ -0.84
HMGA2-210ENST00000541363 C19orf73Q9NVV2 129 aa9.77□□□□□ -0.85
HMGA2-210ENST00000541363 R4GN34 69 aa9.76□□□□□ -0.85
HMGA2-210ENST00000541363 PRAC1Q96KF2 57 aa9.75□□□□□ -0.85
HMGA2-210ENST00000541363 LINC01558Q9Y6Z2 57 aa9.75□□□□□ -0.85
HMGA2-210ENST00000541363 H1FX-AS1Q4G0G2 97 aa9.73□□□□□ -0.85
HMGA2-210ENST00000541363 IGF2RP11717 2491 aa9.73□□□□□ -0.85
HMGA2-210ENST00000541363 GIG44P09565 113 aaPredicted RBP9.72□□□□□ -0.85
HMGA2-210ENST00000541363 KLK9Q2XQG4 91 aa9.71□□□□□ -0.85
HMGA2-210ENST00000541363 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.71□□□□□ -0.86
HMGA2-210ENST00000541363 ROMO1P60602 79 aa9.7□□□□□ -0.86
HMGA2-210ENST00000541363 ZCCHC13Q8WW36 166 aaKnown RBP9.7□□□□□ -0.86
HMGA2-210ENST00000541363 C10orf142B7Z368 130 aa9.69□□□□□ -0.86
HMGA2-210ENST00000541363 Q8N9P0 234 aaPredicted RBP9.67□□□□□ -0.86
HMGA2-210ENST00000541363 SETD2Q9BYW2 2564 aaPredicted RBP9.67□□□□□ -0.86
HMGA2-210ENST00000541363 USP9XQ93008 2570 aaPredicted RBP9.66□□□□□ -0.86
HMGA2-210ENST00000541363 ASB16-AS1Q495Z4 193 aa9.66□□□□□ -0.86
HMGA2-210ENST00000541363 FAM229BQ4G0N7 80 aa9.65□□□□□ -0.86
HMGA2-210ENST00000541363 CASC10Q5T4H9 136 aa9.64□□□□□ -0.87
HMGA2-210ENST00000541363 PLAC4Q8WY50 150 aa9.62□□□□□ -0.87
HMGA2-210ENST00000541363 RPL37P61927 97 aaKnown RBP9.6□□□□□ -0.87
HMGA2-210ENST00000541363 CHD8Q9HCK8 2581 aa9.6□□□□□ -0.87
HMGA2-210ENST00000541363 TNP2Q05952 138 aa9.6□□□□□ -0.87
HMGA2-210ENST00000541363 Q5VV11 94 aa9.58□□□□□ -0.88
HMGA2-210ENST00000541363 NCOR2Q9Y618 2525 aa9.58□□□□□ -0.88
HMGA2-210ENST00000541363 KRTAP16-1A8MUX0 517 aa9.56□□□□□ -0.88
HMGA2-210ENST00000541363 SEC61BP60468 96 aaKnown RBP9.54□□□□□ -0.88
HMGA2-210ENST00000541363 Q5W150 140 aa9.53□□□□□ -0.88
HMGA2-210ENST00000541363 Q5XG85 94 aa9.53□□□□□ -0.88
HMGA2-210ENST00000541363 MMP24-AS1A0A0U1RRL7 71 aa9.53□□□□□ -0.88
HMGA2-210ENST00000541363 PIEZO1Q92508 2521 aa9.53□□□□□ -0.88
HMGA2-210ENST00000541363 M0QZ58 72 aa9.52□□□□□ -0.89
HMGA2-210ENST00000541363 KRTAP10-3P60369 221 aa9.5□□□□□ -0.89
HMGA2-210ENST00000541363 MTORP42345 2549 aa9.47□□□□□ -0.89
HMGA2-210ENST00000541363 USP9YO00507 2555 aaPredicted RBP9.47□□□□□ -0.89
HMGA2-210ENST00000541363 FP248Q71RG6 208 aaPredicted RBP9.45□□□□□ -0.9
HMGA2-210ENST00000541363 SPTBN4Q9H254 2564 aa9.45□□□□□ -0.9
HMGA2-210ENST00000541363 ANKRD11Q6UB99 2663 aaPredicted RBP9.41□□□□□ -0.9
HMGA2-210ENST00000541363 PLAC8Q9NZF1 115 aa9.38□□□□□ -0.91
HMGA2-210ENST00000541363 ADM2Q7Z4H4 148 aa9.38□□□□□ -0.91
HMGA2-210ENST00000541363 C20orf166-AS1Q96NR2 134 aa9.37□□□□□ -0.91
HMGA2-210ENST00000541363 BPTFQ12830 3046 aa9.36□□□□□ -0.91
HMGA2-210ENST00000541363 LINC00472Q9H8W2 130 aa9.32□□□□□ -0.92
HMGA2-210ENST00000541363 A0A096LNT2 108 aa9.3□□□□□ -0.92
HMGA2-210ENST00000541363 EPG5Q9HCE0 2579 aa9.3□□□□□ -0.92
HMGA2-210ENST00000541363 SPATA8Q6RVD6 105 aa9.28□□□□□ -0.92
HMGA2-210ENST00000541363 CEP295Q9C0D2 2601 aa9.28□□□□□ -0.92
HMGA2-210ENST00000541363 USP24Q9UPU5 2620 aa9.27□□□□□ -0.93
HMGA2-210ENST00000541363 PRRC2CQ9Y520 2896 aaKnown RBP9.27□□□□□ -0.93
HMGA2-210ENST00000541363 CYSTM1Q9H1C7 97 aa9.25□□□□□ -0.93
HMGA2-210ENST00000541363 Q8NDZ9 215 aa9.25□□□□□ -0.93
HMGA2-210ENST00000541363 SPRR1AP35321 89 aa9.24□□□□□ -0.93
HMGA2-210ENST00000541363 Q5VSD8 79 aa9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 88.8 ms