RNA–Protein interactions for RNA: ENST00000541359.1

LINC00943-207, long intergenic non-protein coding RNA 943, humanhuman

TSL 4

Gene LINC00943, Length 676 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00943-207ENST00000541359 ETDCA0A1B0GVM5 59 aa12.72□□□□□ -0.37
LINC00943-207ENST00000541359 B5MCH6 92 aa12.72□□□□□ -0.37
LINC00943-207ENST00000541359 MUSTN1Q8IVN3 82 aa12.72□□□□□ -0.37
LINC00943-207ENST00000541359 HIGD2AQ9BW72 106 aa12.72□□□□□ -0.37
LINC00943-207ENST00000541359 ANAPC11Q9NYG5 84 aa12.72□□□□□ -0.37
LINC00943-207ENST00000541359 S100A12P80511 92 aa12.71□□□□□ -0.37
LINC00943-207ENST00000541359 COX8AP10176 69 aa12.7□□□□□ -0.38
LINC00943-207ENST00000541359 SMCR5Q8TEV8 140 aa12.7□□□□□ -0.38
LINC00943-207ENST00000541359 LINC00518Q8N0U6 118 aa12.68□□□□□ -0.38
LINC00943-207ENST00000541359 COPS9Q8WXC6 57 aa12.68□□□□□ -0.38
LINC00943-207ENST00000541359 ZNF73O43830 326 aaPredicted RBP12.67□□□□□ -0.38
LINC00943-207ENST00000541359 RPL13AP40429 203 aaKnown RBP12.67□□□□□ -0.38
LINC00943-207ENST00000541359 Q6ZRX8 168 aa12.67□□□□□ -0.38
LINC00943-207ENST00000541359 Q9BRP9 147 aa12.67□□□□□ -0.38
LINC00943-207ENST00000541359 DLEU1O43261 78 aa12.66□□□□□ -0.38
LINC00943-207ENST00000541359 FAM229BQ4G0N7 80 aa12.66□□□□□ -0.38
LINC00943-207ENST00000541359 KRTAP13-2Q52LG2 175 aa12.66□□□□□ -0.38
LINC00943-207ENST00000541359 OR13C6PQ8NH95 151 aa12.66□□□□□ -0.38
LINC00943-207ENST00000541359 PAM16Q9Y3D7 125 aa12.66□□□□□ -0.38
LINC00943-207ENST00000541359 SPATA45Q537H7 98 aa12.65□□□□□ -0.38
LINC00943-207ENST00000541359 PYY3Q5JQD4 70 aa12.65□□□□□ -0.38
LINC00943-207ENST00000541359 SPRR4Q96PI1 79 aa12.65□□□□□ -0.38
LINC00943-207ENST00000541359 ERC2-IT1O76042 136 aa12.64□□□□□ -0.39
LINC00943-207ENST00000541359 CRYGAP11844 174 aa12.64□□□□□ -0.39
LINC00943-207ENST00000541359 C14orf144Q96I85 54 aa12.63□□□□□ -0.39
LINC00943-207ENST00000541359 VAMP8Q9BV40 100 aa12.63□□□□□ -0.39
LINC00943-207ENST00000541359 CBY1Q9Y3M2 126 aa12.62□□□□□ -0.39
LINC00943-207ENST00000541359 ZNF706Q9Y5V0 76 aaPredicted RBP12.59□□□□□ -0.39
LINC00943-207ENST00000541359 A4D1N5 150 aa12.57□□□□□ -0.4
LINC00943-207ENST00000541359 C2orf91Q6ZV80 131 aa12.57□□□□□ -0.4
LINC00943-207ENST00000541359 TYMSOSQ8TAI1 123 aa12.57□□□□□ -0.4
LINC00943-207ENST00000541359 A6NDN8 102 aa12.56□□□□□ -0.4
LINC00943-207ENST00000541359 C6orf99Q4VX62 202 aa12.56□□□□□ -0.4
LINC00943-207ENST00000541359 LINC00483Q53H64 154 aa12.56□□□□□ -0.4
LINC00943-207ENST00000541359 C3orf22Q8N5N4 141 aa12.55□□□□□ -0.4
LINC00943-207ENST00000541359 HIGD1BQ9P298 99 aa12.55□□□□□ -0.4
LINC00943-207ENST00000541359 TRAV13-2A0A0B4J235 113 aa12.54□□□□□ -0.4
LINC00943-207ENST00000541359 ELOF1P60002 83 aaKnown RBP12.54□□□□□ -0.4
LINC00943-207ENST00000541359 SLC25A34Q6PIV7 304 aa12.54□□□□□ -0.4
LINC00943-207ENST00000541359 HIST1H4GQ99525 98 aa12.54□□□□□ -0.4
LINC00943-207ENST00000541359 HINT1P49773 126 aaPredicted RBP12.53□□□□□ -0.4
LINC00943-207ENST00000541359 COX7BP24311 80 aa12.51□□□□□ -0.41
LINC00943-207ENST00000541359 TRBV7-6A0A0J9YX20 115 aa12.5□□□□□ -0.41
LINC00943-207ENST00000541359 GAGE2AQ6NT46 116 aa12.5□□□□□ -0.41
LINC00943-207ENST00000541359 ST20-AS1Q8NBB2 130 aa12.5□□□□□ -0.41
LINC00943-207ENST00000541359 SMIM11BQ8TCY0 68 aa12.5□□□□□ -0.41
LINC00943-207ENST00000541359 DHRS4-AS1Q9P1J3 65 aa12.48□□□□□ -0.41
LINC00943-207ENST00000541359 C12orf57Q99622 126 aa12.47□□□□□ -0.41
LINC00943-207ENST00000541359 A0A1B0GWB2 263 aa12.46□□□□□ -0.41
LINC00943-207ENST00000541359 LINC00304Q8N9R0 145 aa12.44□□□□□ -0.42
LINC00943-207ENST00000541359 TSPAN13O95857 204 aa12.42□□□□□ -0.42
LINC00943-207ENST00000541359 CFC1BP0CG36 223 aa12.42□□□□□ -0.42
LINC00943-207ENST00000541359 CFC1P0CG37 223 aa12.42□□□□□ -0.42
LINC00943-207ENST00000541359 SPRR1BP22528 89 aa12.42□□□□□ -0.42
LINC00943-207ENST00000541359 TAL2Q16559 108 aa12.42□□□□□ -0.42
LINC00943-207ENST00000541359 CEND1Q8N111 149 aa12.4□□□□□ -0.42
LINC00943-207ENST00000541359 LRP2P98164 4655 aa12.38□□□□□ -0.43
LINC00943-207ENST00000541359 Q8NBF4 154 aa12.38□□□□□ -0.43
LINC00943-207ENST00000541359 IGLV9-49A0A0B4J1Y8 123 aa12.37□□□□□ -0.43
LINC00943-207ENST00000541359 A0A0B4J2C4 111 aa12.37□□□□□ -0.43
LINC00943-207ENST00000541359 MOBPQ13875 183 aa12.37□□□□□ -0.43
LINC00943-207ENST00000541359 FXYD2P54710 66 aa12.36□□□□□ -0.43
LINC00943-207ENST00000541359 LINC01547P58512 204 aaPredicted RBP12.36□□□□□ -0.43
LINC00943-207ENST00000541359 CTAG1AP78358 180 aa12.34□□□□□ -0.43
LINC00943-207ENST00000541359 UQCR10Q9UDW1 63 aa12.34□□□□□ -0.43
LINC00943-207ENST00000541359 IGLV5-48A0A075B6I7 105 aa12.33□□□□□ -0.44
LINC00943-207ENST00000541359 LINC00575Q6W349 94 aa12.33□□□□□ -0.44
LINC00943-207ENST00000541359 SSBP3-AS1Q7Z2R9 100 aa12.33□□□□□ -0.44
LINC00943-207ENST00000541359 LPAP08519 4548 aa12.32□□□□□ -0.44
LINC00943-207ENST00000541359 HSD52Q0P140 79 aa12.32□□□□□ -0.44
LINC00943-207ENST00000541359 SPAG11AQ6PDA7 123 aa12.32□□□□□ -0.44
LINC00943-207ENST00000541359 UBR4Q5T4S7 5183 aa12.31□□□□□ -0.44
LINC00943-207ENST00000541359 VAMP3Q15836 100 aa12.31□□□□□ -0.44
LINC00943-207ENST00000541359 RAB37Q96AX2 223 aa12.31□□□□□ -0.44
LINC00943-207ENST00000541359 SMIM29Q86T20 159 aa12.3□□□□□ -0.44
LINC00943-207ENST00000541359 DEFB105AQ8NG35 78 aa12.3□□□□□ -0.44
LINC00943-207ENST00000541359 NHP2Q9NX24 153 aaKnown RBP12.3□□□□□ -0.44
LINC00943-207ENST00000541359 TEX49A0A1B0GTD5 131 aa12.29□□□□□ -0.44
LINC00943-207ENST00000541359 TMEM238LA0A1B0GVL6 79 aa12.29□□□□□ -0.44
LINC00943-207ENST00000541359 A6NJY4 79 aa12.29□□□□□ -0.44
LINC00943-207ENST00000541359 H7C2G1 150 aa12.29□□□□□ -0.44
LINC00943-207ENST00000541359 C9orf153Q5TBE3 101 aa12.28□□□□□ -0.44
LINC00943-207ENST00000541359 BVES-AS1Q5T3Y7 98 aa12.27□□□□□ -0.45
LINC00943-207ENST00000541359 SMIM6P0DI80 62 aa12.26□□□□□ -0.45
LINC00943-207ENST00000541359 PRR4Q16378 134 aa12.26□□□□□ -0.45
LINC00943-207ENST00000541359 Q8N377 158 aa12.26□□□□□ -0.45
LINC00943-207ENST00000541359 RETNLBQ9BQ08 111 aa12.26□□□□□ -0.45
LINC00943-207ENST00000541359 LAMTOR3Q9UHA4 124 aa12.26□□□□□ -0.45
LINC00943-207ENST00000541359 PRO1854Q9UHT4 67 aa12.26□□□□□ -0.45
LINC00943-207ENST00000541359 hADV29S1A0JD25 119 aa12.25□□□□□ -0.45
LINC00943-207ENST00000541359 SLC25A20O43772 301 aa12.25□□□□□ -0.45
LINC00943-207ENST00000541359 Q1RN00 199 aa12.25□□□□□ -0.45
LINC00943-207ENST00000541359 LOC105371267A0A1B0GV96 52 aa12.24□□□□□ -0.45
LINC00943-207ENST00000541359 SPINK1P00995 79 aa12.24□□□□□ -0.45
LINC00943-207ENST00000541359 C4orf48Q5BLP8 95 aa12.24□□□□□ -0.45
LINC00943-207ENST00000541359 PRO1933Q9H354 126 aa12.24□□□□□ -0.45
LINC00943-207ENST00000541359 Q6ZQY7 126 aa12.22□□□□□ -0.45
LINC00943-207ENST00000541359 K7ERJ3 54 aa12.21□□□□□ -0.45
LINC00943-207ENST00000541359 RPS29P62273 56 aaKnown RBP12.2□□□□□ -0.46
LINC00943-207ENST00000541359 FAM218AQ96MZ4 157 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms