RNA–Protein interactions for RNA: ENST00000540669.1

VPS33A-204, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 3

Gene VPS33A, Length 455 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-204ENST00000540669 SMR3BP02814 79 aaPredicted RBP6.53□□□□□ -1.36
VPS33A-204ENST00000540669 CFC1BP0CG36 223 aa6.53□□□□□ -1.36
VPS33A-204ENST00000540669 CFC1P0CG37 223 aa6.53□□□□□ -1.36
VPS33A-204ENST00000540669 CTAG1AP78358 180 aa6.53□□□□□ -1.36
VPS33A-204ENST00000540669 NKAPP1Q8N9T2 125 aa6.53□□□□□ -1.36
VPS33A-204ENST00000540669 KCNQ1DNQ9H478 68 aa6.53□□□□□ -1.36
VPS33A-204ENST00000540669 TRBV10-3A0A0K0K1G6 114 aa6.52□□□□□ -1.37
VPS33A-204ENST00000540669 LBHQ53QV2 105 aaPredicted RBP6.52□□□□□ -1.37
VPS33A-204ENST00000540669 KRTAP13-1Q8IUC0 172 aa6.52□□□□□ -1.37
VPS33A-204ENST00000540669 PRYO14603 147 aa6.51□□□□□ -1.37
VPS33A-204ENST00000540669 ABCA13Q86UQ4 5058 aa6.5□□□□□ -1.37
VPS33A-204ENST00000540669 TRAV13-2A0A0B4J235 113 aa6.5□□□□□ -1.37
VPS33A-204ENST00000540669 M0R143 59 aa6.5□□□□□ -1.37
VPS33A-204ENST00000540669 TMEM126AQ9H061 195 aa6.5□□□□□ -1.37
VPS33A-204ENST00000540669 PSORS1C2Q9UIG4 136 aa6.5□□□□□ -1.37
VPS33A-204ENST00000540669 INAFM2P0DMQ5 153 aa6.49□□□□□ -1.37
VPS33A-204ENST00000540669 SVIPQ8NHG7 77 aa6.49□□□□□ -1.37
VPS33A-204ENST00000540669 FAT3Q8TDW7 4589 aa6.48□□□□□ -1.37
VPS33A-204ENST00000540669 GAGE10A6NGK3 116 aa6.48□□□□□ -1.37
VPS33A-204ENST00000540669 RPL37AP61513 92 aaKnown RBP6.48□□□□□ -1.37
VPS33A-204ENST00000540669 TRAV23DV6A0A075B6W5 121 aa6.47□□□□□ -1.37
VPS33A-204ENST00000540669 RPL37AP8A6NKH3 93 aa6.47□□□□□ -1.37
VPS33A-204ENST00000540669 K7ERJ3 54 aa6.47□□□□□ -1.37
VPS33A-204ENST00000540669 HINT1P49773 126 aaPredicted RBP6.47□□□□□ -1.37
VPS33A-204ENST00000540669 NHP2Q9NX24 153 aaKnown RBP6.47□□□□□ -1.37
VPS33A-204ENST00000540669 MYCBP2O75592 4640 aa6.46□□□□□ -1.37
VPS33A-204ENST00000540669 TRBV7-6A0A0J9YX20 115 aa6.46□□□□□ -1.38
VPS33A-204ENST00000540669 H0Y9J4 135 aa6.46□□□□□ -1.38
VPS33A-204ENST00000540669 RPL13AP40429 203 aaKnown RBP6.46□□□□□ -1.38
VPS33A-204ENST00000540669 RPL28P46779 137 aaKnown RBP6.46□□□□□ -1.38
VPS33A-204ENST00000540669 SNHG12Q9BXW3 62 aa6.46□□□□□ -1.38
VPS33A-204ENST00000540669 PRO1854Q9UHT4 67 aa6.46□□□□□ -1.38
VPS33A-204ENST00000540669 ZNF73O43830 326 aaPredicted RBP6.45□□□□□ -1.38
VPS33A-204ENST00000540669 BCE1O60756 84 aa6.45□□□□□ -1.38
VPS33A-204ENST00000540669 UBE2BP63146 152 aa6.45□□□□□ -1.38
VPS33A-204ENST00000540669 S100A7L2Q5SY68 101 aa6.45□□□□□ -1.38
VPS33A-204ENST00000540669 REG3GQ6UW15 175 aa6.45□□□□□ -1.38
VPS33A-204ENST00000540669 SMIM11BQ8TCY0 68 aa6.45□□□□□ -1.38
VPS33A-204ENST00000540669 CBY1Q9Y3M2 126 aa6.45□□□□□ -1.38
VPS33A-204ENST00000540669 B5MCH6 92 aa6.44□□□□□ -1.38
VPS33A-204ENST00000540669 ELOF1P60002 83 aaKnown RBP6.44□□□□□ -1.38
VPS33A-204ENST00000540669 A6NDN8 102 aa6.43□□□□□ -1.38
VPS33A-204ENST00000540669 TSPAN13O95857 204 aa6.43□□□□□ -1.38
VPS33A-204ENST00000540669 Q6ZRX8 168 aa6.43□□□□□ -1.38
VPS33A-204ENST00000540669 KRTAP9-2Q9BYQ4 174 aa6.43□□□□□ -1.38
VPS33A-204ENST00000540669 LRP1Q07954 4544 aaKnown RBP6.43□□□□□ -1.38
VPS33A-204ENST00000540669 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.42□□□□□ -1.38
VPS33A-204ENST00000540669 IGLV7-43P04211 117 aa6.42□□□□□ -1.38
VPS33A-204ENST00000540669 C6orf99Q4VX62 202 aa6.42□□□□□ -1.38
VPS33A-204ENST00000540669 OR13C6PQ8NH95 151 aa6.42□□□□□ -1.38
VPS33A-204ENST00000540669 DIRC1Q969H9 104 aa6.42□□□□□ -1.38
VPS33A-204ENST00000540669 RAB37Q96AX2 223 aa6.42□□□□□ -1.38
VPS33A-204ENST00000540669 Q9BRP9 147 aa6.41□□□□□ -1.38
VPS33A-204ENST00000540669 TRIAP1O43715 76 aa6.4□□□□□ -1.38
VPS33A-204ENST00000540669 C1orf137Q5JT78 98 aa6.4□□□□□ -1.38
VPS33A-204ENST00000540669 SMCR5Q8TEV8 140 aa6.4□□□□□ -1.38
VPS33A-204ENST00000540669 TAX1BP3O14907 124 aa6.39□□□□□ -1.39
VPS33A-204ENST00000540669 ZNF861PO60384 105 aa6.39□□□□□ -1.39
VPS33A-204ENST00000540669 PRLHP81277 87 aa6.39□□□□□ -1.39
VPS33A-204ENST00000540669 KRTAP4-5Q9BYR2 181 aa6.39□□□□□ -1.39
VPS33A-204ENST00000540669 TNXBP22105 4242 aa6.39□□□□□ -1.39
VPS33A-204ENST00000540669 KRTAP9-6A0A140TA67 174 aa6.38□□□□□ -1.39
VPS33A-204ENST00000540669 PCP4L1A6NKN8 68 aa6.38□□□□□ -1.39
VPS33A-204ENST00000540669 CDIP1Q9H305 208 aa6.38□□□□□ -1.39
VPS33A-204ENST00000540669 ETDCA0A1B0GVM5 59 aa6.37□□□□□ -1.39
VPS33A-204ENST00000540669 COX7BP24311 80 aa6.37□□□□□ -1.39
VPS33A-204ENST00000540669 FAM19A1Q7Z5A9 133 aa6.37□□□□□ -1.39
VPS33A-204ENST00000540669 PCLOQ9Y6V0 5065 aa6.37□□□□□ -1.39
VPS33A-204ENST00000540669 KRTAP1-4P0C5Y4 121 aa6.36□□□□□ -1.39
VPS33A-204ENST00000540669 BATFQ16520 125 aa6.36□□□□□ -1.39
VPS33A-204ENST00000540669 LINC00575Q6W349 94 aa6.36□□□□□ -1.39
VPS33A-204ENST00000540669 FAM218AQ96MZ4 157 aa6.36□□□□□ -1.39
VPS33A-204ENST00000540669 H7C2G1 150 aa6.35□□□□□ -1.39
VPS33A-204ENST00000540669 ERC2-IT1O76042 136 aa6.35□□□□□ -1.39
VPS33A-204ENST00000540669 COL5A1-AS1Q5SY13 56 aa6.35□□□□□ -1.39
VPS33A-204ENST00000540669 SPINK6Q6UWN8 80 aa6.35□□□□□ -1.39
VPS33A-204ENST00000540669 FLG2Q5D862 2391 aaPredicted RBP6.34□□□□□ -1.39
VPS33A-204ENST00000540669 IGLV5-48A0A075B6I7 105 aa6.34□□□□□ -1.39
VPS33A-204ENST00000540669 A0A1B0GX51 115 aa6.34□□□□□ -1.39
VPS33A-204ENST00000540669 C9orf118A6NHY6 69 aa6.34□□□□□ -1.39
VPS33A-204ENST00000540669 H0YGX0 51 aa6.34□□□□□ -1.39
VPS33A-204ENST00000540669 UBE2AP49459 152 aa6.34□□□□□ -1.39
VPS33A-204ENST00000540669 LINC01547P58512 204 aaPredicted RBP6.34□□□□□ -1.39
VPS33A-204ENST00000540669 DHRS4-AS1Q9P1J3 65 aa6.34□□□□□ -1.39
VPS33A-204ENST00000540669 OXTP01178 125 aa6.33□□□□□ -1.4
VPS33A-204ENST00000540669 SPRR1BP22528 89 aa6.33□□□□□ -1.4
VPS33A-204ENST00000540669 Q1RN00 199 aa6.33□□□□□ -1.4
VPS33A-204ENST00000540669 LINC00483Q53H64 154 aa6.33□□□□□ -1.4
VPS33A-204ENST00000540669 LST1O00453 97 aa6.32□□□□□ -1.4
VPS33A-204ENST00000540669 SPRR4Q96PI1 79 aa6.32□□□□□ -1.4
VPS33A-204ENST00000540669 A0A1W2PPM0 123 aa6.31□□□□□ -1.4
VPS33A-204ENST00000540669 VAMP3Q15836 100 aa6.31□□□□□ -1.4
VPS33A-204ENST00000540669 CLEC2BQ92478 149 aa6.31□□□□□ -1.4
VPS33A-204ENST00000540669 NAA38Q9BRA0 125 aaKnown RBP6.31□□□□□ -1.4
VPS33A-204ENST00000540669 HIGD2AQ9BW72 106 aa6.31□□□□□ -1.4
VPS33A-204ENST00000540669 KRTAP29-1A8MX34 341 aaPredicted RBP6.3□□□□□ -1.4
VPS33A-204ENST00000540669 H3BUT2 72 aa6.3□□□□□ -1.4
VPS33A-204ENST00000540669 TRACP01848 142 aa6.3□□□□□ -1.4
VPS33A-204ENST00000540669 TCL1BO95988 128 aa6.29□□□□□ -1.4
VPS33A-204ENST00000540669 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms