RNA–Protein interactions for RNA: ENST00000540236.3

PBX1-212, Transcript of PBX homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene PBX1, Length 6,175 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX1-212ENST00000540236 SPINT4Q6UDR6 99 aa7.24□□□□□ -1.25
PBX1-212ENST00000540236 SPG11Q96JI7 2443 aa7.24□□□□□ -1.25
PBX1-212ENST00000540236 Q6ZRX8 168 aa7.23□□□□□ -1.25
PBX1-212ENST00000540236 TACC2O95359 2948 aa7.23□□□□□ -1.25
PBX1-212ENST00000540236 IGFL1Q6UW32 110 aa7.23□□□□□ -1.25
PBX1-212ENST00000540236 PRR26Q8N8Z3 221 aa7.23□□□□□ -1.25
PBX1-212ENST00000540236 A6NN06 94 aa7.22□□□□□ -1.25
PBX1-212ENST00000540236 CRIPTQ9P021 101 aa7.22□□□□□ -1.25
PBX1-212ENST00000540236 MIR22HGQ0VDD5 57 aa7.21□□□□□ -1.26
PBX1-212ENST00000540236 SSBP3-AS1Q7Z2R9 100 aa7.2□□□□□ -1.26
PBX1-212ENST00000540236 CSPG4Q6UVK1 2322 aa7.2□□□□□ -1.26
PBX1-212ENST00000540236 TNRC18O15417 2968 aaPredicted RBP7.18□□□□□ -1.26
PBX1-212ENST00000540236 OXLD1Q5BKU9 147 aa7.18□□□□□ -1.26
PBX1-212ENST00000540236 KLK9Q2XQG4 91 aa7.18□□□□□ -1.26
PBX1-212ENST00000540236 C1orf134Q5TEV5 83 aa7.17□□□□□ -1.26
PBX1-212ENST00000540236 LRBAP50851 2863 aa7.17□□□□□ -1.26
PBX1-212ENST00000540236 ACYP2P14621 99 aa7.16□□□□□ -1.26
PBX1-212ENST00000540236 DEFB131BA0A096LNP1 70 aa7.15□□□□□ -1.26
PBX1-212ENST00000540236 A8MWP4 228 aa7.14□□□□□ -1.27
PBX1-212ENST00000540236 GIG44P09565 113 aaPredicted RBP7.14□□□□□ -1.27
PBX1-212ENST00000540236 IGKV2D-30A0A075B6S6 120 aa7.14□□□□□ -1.27
PBX1-212ENST00000540236 IGKV2-30P06310 120 aa7.14□□□□□ -1.27
PBX1-212ENST00000540236 CIRBP-AS1Q8TBR5 109 aa7.14□□□□□ -1.27
PBX1-212ENST00000540236 X6R8D5 127 aa7.14□□□□□ -1.27
PBX1-212ENST00000540236 CUBNO60494 3623 aa7.14□□□□□ -1.27
PBX1-212ENST00000540236 ANKHD1Q8IWZ3 2542 aaKnown RBP7.14□□□□□ -1.27
PBX1-212ENST00000540236 PHF5AQ7RTV0 110 aaKnown RBP7.13□□□□□ -1.27
PBX1-212ENST00000540236 C9orf163Q8N9P6 203 aa7.12□□□□□ -1.27
PBX1-212ENST00000540236 H3BPC8 53 aa7.12□□□□□ -1.27
PBX1-212ENST00000540236 CHTF8P0CG12 524 aa7.11□□□□□ -1.27
PBX1-212ENST00000540236 OTOGLQ3ZCN5 2332 aa7.11□□□□□ -1.27
PBX1-212ENST00000540236 DEFB113Q30KQ7 82 aa7.11□□□□□ -1.27
PBX1-212ENST00000540236 SPANXA2-OT1Q8N9U9 137 aa7.11□□□□□ -1.27
PBX1-212ENST00000540236 ATMQ13315 3056 aa7.11□□□□□ -1.27
PBX1-212ENST00000540236 CNBPP62633 177 aaKnown RBP7.1□□□□□ -1.27
PBX1-212ENST00000540236 CUL9Q8IWT3 2517 aa7.1□□□□□ -1.27
PBX1-212ENST00000540236 HRES1P13985 223 aa7.1□□□□□ -1.27
PBX1-212ENST00000540236 IGLV1-50A0A075B6I6 118 aa7.09□□□□□ -1.27
PBX1-212ENST00000540236 C15orf56Q8N910 161 aa7.09□□□□□ -1.27
PBX1-212ENST00000540236 K7ERS5 55 aa7.08□□□□□ -1.28
PBX1-212ENST00000540236 CSNK1G2-AS1Q8NCQ2 148 aa7.08□□□□□ -1.28
PBX1-212ENST00000540236 KCNQ1DNQ9H478 68 aa7.08□□□□□ -1.28
PBX1-212ENST00000540236 LINC01558Q9Y6Z2 57 aa7.08□□□□□ -1.28
PBX1-212ENST00000540236 KRTAP10-9P60411 292 aa7.07□□□□□ -1.28
PBX1-212ENST00000540236 UQCR11O14957 56 aa7.07□□□□□ -1.28
PBX1-212ENST00000540236 DMXL1Q9Y485 3027 aa7.06□□□□□ -1.28
PBX1-212ENST00000540236 ADGRG4Q8IZF6 3080 aa7.05□□□□□ -1.28
PBX1-212ENST00000540236 INAFM1C9JVW0 142 aa7.05□□□□□ -1.28
PBX1-212ENST00000540236 IGLV7-46A0A075B6I9 117 aa7.05□□□□□ -1.28
PBX1-212ENST00000540236 GVQW2A0A096LPI5 108 aaPredicted RBP7.05□□□□□ -1.28
PBX1-212ENST00000540236 ZFHX2Q9C0A1 2572 aaPredicted RBP7.05□□□□□ -1.28
PBX1-212ENST00000540236 SMR3AQ99954 134 aa7.05□□□□□ -1.28
PBX1-212ENST00000540236 TP53AIP1Q9HCN2 124 aa7.04□□□□□ -1.28
PBX1-212ENST00000540236 IGLV5-48A0A075B6I7 105 aa7.04□□□□□ -1.28
PBX1-212ENST00000540236 ANAPC11Q9NYG5 84 aa7.04□□□□□ -1.28
PBX1-212ENST00000540236 CASC10Q5T4H9 136 aa7.04□□□□□ -1.28
PBX1-212ENST00000540236 FN1P02751 2386 aaKnown RBP7.03□□□□□ -1.28
PBX1-212ENST00000540236 RTL8CO15255 209 aa7.03□□□□□ -1.28
PBX1-212ENST00000540236 ZCCHC13Q8WW36 166 aaKnown RBP7.02□□□□□ -1.28
PBX1-212ENST00000540236 C8orf17Q9NRJ1 99 aa7.02□□□□□ -1.29
PBX1-212ENST00000540236 LINC01556Q5JQF7 62 aa7.01□□□□□ -1.29
PBX1-212ENST00000540236 MRPL34Q9BQ48 92 aaKnown RBP7□□□□□ -1.29
PBX1-212ENST00000540236 A0A1B0GW54 56 aa6.99□□□□□ -1.29
PBX1-212ENST00000540236 K7EIL1 84 aa6.99□□□□□ -1.29
PBX1-212ENST00000540236 PTPN13Q12923 2485 aa6.97□□□□□ -1.29
PBX1-212ENST00000540236 MUC3AQ02505 3323 aa6.96□□□□□ -1.29
PBX1-212ENST00000540236 SPRR4Q96PI1 79 aa6.96□□□□□ -1.3
PBX1-212ENST00000540236 DNAH10OSP0CZ25 163 aa6.94□□□□□ -1.3
PBX1-212ENST00000540236 Q6ZR54 194 aa6.93□□□□□ -1.3
PBX1-212ENST00000540236 PRR34Q9NV39 138 aa6.93□□□□□ -1.3
PBX1-212ENST00000540236 RIF1Q5UIP0 2472 aaKnown RBP6.92□□□□□ -1.3
PBX1-212ENST00000540236 MMP24-AS1A0A0U1RRL7 71 aa6.91□□□□□ -1.3
PBX1-212ENST00000540236 Q8N1X5 172 aa6.91□□□□□ -1.3
PBX1-212ENST00000540236 COL12A1Q99715 3063 aa6.91□□□□□ -1.3
PBX1-212ENST00000540236 C19orf73Q9NVV2 129 aa6.9□□□□□ -1.3
PBX1-212ENST00000540236 CSMD2Q7Z408 3487 aa6.9□□□□□ -1.3
PBX1-212ENST00000540236 A0A1B0GVX0 72 aa6.9□□□□□ -1.3
PBX1-212ENST00000540236 PLA2G1BP04054 148 aaKnown RBP6.89□□□□□ -1.31
PBX1-212ENST00000540236 ATRXP46100 2492 aa6.88□□□□□ -1.31
PBX1-212ENST00000540236 A0A0D9SG42 100 aa6.87□□□□□ -1.31
PBX1-212ENST00000540236 IGLV5-37A0A075B6J1 123 aa6.87□□□□□ -1.31
PBX1-212ENST00000540236 LCE6AA0A183 80 aa6.86□□□□□ -1.31
PBX1-212ENST00000540236 HIVEP3Q5T1R4 2406 aa6.85□□□□□ -1.31
PBX1-212ENST00000540236 C14orf177Q52M58 125 aa6.84□□□□□ -1.31
PBX1-212ENST00000540236 SPACA4Q8TDM5 124 aa6.83□□□□□ -1.32
PBX1-212ENST00000540236 APLNQ9ULZ1 77 aa6.83□□□□□ -1.32
PBX1-212ENST00000540236 VPS13CQ709C8 3753 aa6.82□□□□□ -1.32
PBX1-212ENST00000540236 MUC6Q6W4X9 2439 aa6.81□□□□□ -1.32
PBX1-212ENST00000540236 KRTAP10-3P60369 221 aa6.81□□□□□ -1.32
PBX1-212ENST00000540236 KRTAP29-1A8MX34 341 aaPredicted RBP6.8□□□□□ -1.32
PBX1-212ENST00000540236 TTC28Q96AY4 2481 aa6.8□□□□□ -1.32
PBX1-212ENST00000540236 A0A0A0MQY5 61 aa6.79□□□□□ -1.32
PBX1-212ENST00000540236 SONP18583 2426 aaKnown RBP6.79□□□□□ -1.32
PBX1-212ENST00000540236 Q96NJ1 140 aa6.78□□□□□ -1.32
PBX1-212ENST00000540236 TLN1Q9Y490 2541 aaKnown RBP6.78□□□□□ -1.32
PBX1-212ENST00000540236 TNP2Q05952 138 aa6.77□□□□□ -1.32
PBX1-212ENST00000540236 A0A087X002 238 aa6.77□□□□□ -1.33
PBX1-212ENST00000540236 NOTCH2NLQ7Z3S9 236 aa6.77□□□□□ -1.33
PBX1-212ENST00000540236 JMJD1CQ15652 2540 aa6.77□□□□□ -1.33
PBX1-212ENST00000540236 LINC00472Q9H8W2 130 aa6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms