RNA–Protein interactions for RNA: ENST00000539784.1

TSPAN9-IT1-201, TSPAN9 intronic transcript 1, humanhuman

TSL 4 BASIC

Gene TSPAN9-IT1, Length 562 nt, Biotype sense intronic.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN9-IT1-201ENST00000539784 HIST1H2BMQ99879 126 aa7.28□□□□□ -1.24
TSPAN9-IT1-201ENST00000539784 Q9BRP9 147 aa7.28□□□□□ -1.24
TSPAN9-IT1-201ENST00000539784 IGLV6-57P01721 117 aa7.27□□□□□ -1.25
TSPAN9-IT1-201ENST00000539784 LINC00483Q53H64 154 aa7.27□□□□□ -1.25
TSPAN9-IT1-201ENST00000539784 A0A0U1RQV1 116 aa7.26□□□□□ -1.25
TSPAN9-IT1-201ENST00000539784 ZNF73O43830 326 aaPredicted RBP7.24□□□□□ -1.25
TSPAN9-IT1-201ENST00000539784 JOSD1Q15040 202 aaPredicted RBP7.24□□□□□ -1.25
TSPAN9-IT1-201ENST00000539784 LINC01545Q5VT33 79 aa7.24□□□□□ -1.25
TSPAN9-IT1-201ENST00000539784 OR13C6PQ8NH95 151 aa7.24□□□□□ -1.25
TSPAN9-IT1-201ENST00000539784 ZNF815PA8K554 130 aa7.23□□□□□ -1.25
TSPAN9-IT1-201ENST00000539784 SPINK1P00995 79 aa7.23□□□□□ -1.25
TSPAN9-IT1-201ENST00000539784 C9orf153Q5TBE3 101 aa7.23□□□□□ -1.25
TSPAN9-IT1-201ENST00000539784 PET117Q6UWS5 81 aa7.23□□□□□ -1.25
TSPAN9-IT1-201ENST00000539784 FP248Q71RG6 208 aaPredicted RBP7.23□□□□□ -1.25
TSPAN9-IT1-201ENST00000539784 LINC00308Q8TCZ7 52 aa7.23□□□□□ -1.25
TSPAN9-IT1-201ENST00000539784 TTTY13Q9BZ97 58 aa7.23□□□□□ -1.25
TSPAN9-IT1-201ENST00000539784 ST20-AS1Q8NBB2 130 aa7.22□□□□□ -1.25
TSPAN9-IT1-201ENST00000539784 LITAFQ99732 161 aa7.22□□□□□ -1.25
TSPAN9-IT1-201ENST00000539784 C3orf79P0CE67 100 aa7.21□□□□□ -1.26
TSPAN9-IT1-201ENST00000539784 HINT1P49773 126 aaPredicted RBP7.21□□□□□ -1.26
TSPAN9-IT1-201ENST00000539784 KRTDAPP60985 99 aa7.21□□□□□ -1.26
TSPAN9-IT1-201ENST00000539784 SSBP3-AS1Q7Z2R9 100 aa7.21□□□□□ -1.26
TSPAN9-IT1-201ENST00000539784 SPANXCQ9NY87 97 aa7.21□□□□□ -1.26
TSPAN9-IT1-201ENST00000539784 TIMM17BO60830 172 aa7.2□□□□□ -1.26
TSPAN9-IT1-201ENST00000539784 CBY1Q9Y3M2 126 aa7.2□□□□□ -1.26
TSPAN9-IT1-201ENST00000539784 MUC2Q02817 5179 aa7.2□□□□□ -1.26
TSPAN9-IT1-201ENST00000539784 KRTAP13-3Q3SY46 172 aa7.18□□□□□ -1.26
TSPAN9-IT1-201ENST00000539784 Q8N377 158 aa7.18□□□□□ -1.26
TSPAN9-IT1-201ENST00000539784 SPANXDQ9BXN6 97 aa7.17□□□□□ -1.26
TSPAN9-IT1-201ENST00000539784 SCGB1D4Q6XE38 83 aa7.16□□□□□ -1.26
TSPAN9-IT1-201ENST00000539784 ATOH7Q8N100 152 aa7.16□□□□□ -1.26
TSPAN9-IT1-201ENST00000539784 C20orf202A1L168 122 aa7.15□□□□□ -1.26
TSPAN9-IT1-201ENST00000539784 SLC25A20O43772 301 aa7.15□□□□□ -1.26
TSPAN9-IT1-201ENST00000539784 RPS29P62273 56 aaKnown RBP7.15□□□□□ -1.26
TSPAN9-IT1-201ENST00000539784 COA6Q5JTJ3 125 aaKnown RBP7.15□□□□□ -1.26
TSPAN9-IT1-201ENST00000539784 DHRS4-AS1Q9P1J3 65 aa7.15□□□□□ -1.26
TSPAN9-IT1-201ENST00000539784 COX7BP24311 80 aa7.14□□□□□ -1.27
TSPAN9-IT1-201ENST00000539784 C6orf99Q4VX62 202 aa7.14□□□□□ -1.27
TSPAN9-IT1-201ENST00000539784 ANKRD39Q53RE8 183 aa7.14□□□□□ -1.27
TSPAN9-IT1-201ENST00000539784 LINC00518Q8N0U6 118 aa7.14□□□□□ -1.27
TSPAN9-IT1-201ENST00000539784 C5orf52A6NGY3 159 aa7.13□□□□□ -1.27
TSPAN9-IT1-201ENST00000539784 HRCT1Q6UXD1 115 aa7.13□□□□□ -1.27
TSPAN9-IT1-201ENST00000539784 ELOF1P60002 83 aaKnown RBP7.12□□□□□ -1.27
TSPAN9-IT1-201ENST00000539784 DEFB105AQ8NG35 78 aa7.12□□□□□ -1.27
TSPAN9-IT1-201ENST00000539784 TAL2Q16559 108 aa7.11□□□□□ -1.27
TSPAN9-IT1-201ENST00000539784 SLC25A34Q6PIV7 304 aa7.11□□□□□ -1.27
TSPAN9-IT1-201ENST00000539784 LAMTOR3Q9UHA4 124 aa7.11□□□□□ -1.27
TSPAN9-IT1-201ENST00000539784 A6NDN8 102 aa7.1□□□□□ -1.27
TSPAN9-IT1-201ENST00000539784 SPRR1BP22528 89 aa7.1□□□□□ -1.27
TSPAN9-IT1-201ENST00000539784 Q1RN00 199 aa7.1□□□□□ -1.27
TSPAN9-IT1-201ENST00000539784 ASB16-AS1Q495Z4 193 aa7.1□□□□□ -1.27
TSPAN9-IT1-201ENST00000539784 LCE2AQ5TA79 106 aaPredicted RBP7.1□□□□□ -1.27
TSPAN9-IT1-201ENST00000539784 PCP2Q8IVA1 136 aa7.1□□□□□ -1.27
TSPAN9-IT1-201ENST00000539784 MUSTN1Q8IVN3 82 aa7.09□□□□□ -1.27
TSPAN9-IT1-201ENST00000539784 COPS9Q8WXC6 57 aa7.09□□□□□ -1.27
TSPAN9-IT1-201ENST00000539784 MUC17Q685J3 4493 aa7.09□□□□□ -1.27
TSPAN9-IT1-201ENST00000539784 IFITM1P13164 125 aa7.08□□□□□ -1.28
TSPAN9-IT1-201ENST00000539784 SEC61BP60468 96 aaKnown RBP7.08□□□□□ -1.28
TSPAN9-IT1-201ENST00000539784 LIMD2Q9BT23 127 aa7.07□□□□□ -1.28
TSPAN9-IT1-201ENST00000539784 A0A1B0GWB2 263 aa7.06□□□□□ -1.28
TSPAN9-IT1-201ENST00000539784 TRBV7-6A0A0J9YX20 115 aa7.05□□□□□ -1.28
TSPAN9-IT1-201ENST00000539784 TEX49A0A1B0GTD5 131 aa7.05□□□□□ -1.28
TSPAN9-IT1-201ENST00000539784 AKR1D1P51857 326 aa7.05□□□□□ -1.28
TSPAN9-IT1-201ENST00000539784 XP32Q5T750 250 aa7.05□□□□□ -1.28
TSPAN9-IT1-201ENST00000539784 Q6ZVH6 145 aa7.05□□□□□ -1.28
TSPAN9-IT1-201ENST00000539784 KRTAP4-1Q9BYQ7 146 aa7.05□□□□□ -1.28
TSPAN9-IT1-201ENST00000539784 H7C2G1 150 aa7.04□□□□□ -1.28
TSPAN9-IT1-201ENST00000539784 S100A2P29034 98 aa7.03□□□□□ -1.28
TSPAN9-IT1-201ENST00000539784 PRO1933Q9H354 126 aa7.03□□□□□ -1.28
TSPAN9-IT1-201ENST00000539784 TRAV13-2A0A0B4J235 113 aa7.02□□□□□ -1.29
TSPAN9-IT1-201ENST00000539784 A0A0G2JQZ4 141 aa7.02□□□□□ -1.29
TSPAN9-IT1-201ENST00000539784 C9orf92A6NGG3 77 aa7.02□□□□□ -1.29
TSPAN9-IT1-201ENST00000539784 HIST3H2BBQ8N257 126 aa7.02□□□□□ -1.29
TSPAN9-IT1-201ENST00000539784 SMIM11BQ8TCY0 68 aa7.02□□□□□ -1.29
TSPAN9-IT1-201ENST00000539784 FAT4Q6V0I7 4981 aa7.01□□□□□ -1.29
TSPAN9-IT1-201ENST00000539784 LINC01547P58512 204 aaPredicted RBP7.01□□□□□ -1.29
TSPAN9-IT1-201ENST00000539784 SNRPEP62304 92 aaKnown RBP7.01□□□□□ -1.29
TSPAN9-IT1-201ENST00000539784 SMIM29Q86T20 159 aa7.01□□□□□ -1.29
TSPAN9-IT1-201ENST00000539784 HIST1H2BLQ99880 126 aa7.01□□□□□ -1.29
TSPAN9-IT1-201ENST00000539784 KRTAP9-2Q9BYQ4 174 aa7.01□□□□□ -1.29
TSPAN9-IT1-201ENST00000539784 HSBP1L1C9JCN9 74 aa7□□□□□ -1.29
TSPAN9-IT1-201ENST00000539784 IGLV5-48A0A075B6I7 105 aa6.99□□□□□ -1.29
TSPAN9-IT1-201ENST00000539784 A4D1N5 150 aa6.99□□□□□ -1.29
TSPAN9-IT1-201ENST00000539784 CD164Q04900 197 aa6.99□□□□□ -1.29
TSPAN9-IT1-201ENST00000539784 NHP2Q9NX24 153 aaKnown RBP6.99□□□□□ -1.29
TSPAN9-IT1-201ENST00000539784 S100A6P06703 90 aa6.97□□□□□ -1.29
TSPAN9-IT1-201ENST00000539784 VAMP3Q15836 100 aa6.96□□□□□ -1.3
TSPAN9-IT1-201ENST00000539784 PCOTHQ58A44 107 aa6.95□□□□□ -1.3
TSPAN9-IT1-201ENST00000539784 C12orf57Q99622 126 aa6.95□□□□□ -1.3
TSPAN9-IT1-201ENST00000539784 F8WEM9 126 aa6.94□□□□□ -1.3
TSPAN9-IT1-201ENST00000539784 C1orf195Q5TG92 126 aa6.94□□□□□ -1.3
TSPAN9-IT1-201ENST00000539784 SCGB1D1O95968 90 aa6.93□□□□□ -1.3
TSPAN9-IT1-201ENST00000539784 S100A1P23297 94 aa6.93□□□□□ -1.3
TSPAN9-IT1-201ENST00000539784 LINC00575Q6W349 94 aa6.93□□□□□ -1.3
TSPAN9-IT1-201ENST00000539784 IGLV8-61A0A075B6I0 122 aa6.92□□□□□ -1.3
TSPAN9-IT1-201ENST00000539784 hADV29S1A0JD25 119 aa6.92□□□□□ -1.3
TSPAN9-IT1-201ENST00000539784 Q5XG85 94 aa6.92□□□□□ -1.3
TSPAN9-IT1-201ENST00000539784 Q6ZQY7 126 aa6.92□□□□□ -1.3
TSPAN9-IT1-201ENST00000539784 HIST1H4GQ99525 98 aa6.92□□□□□ -1.3
TSPAN9-IT1-201ENST00000539784 TCL1BO95988 128 aa6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms