RNA–Protein interactions for RNA: ENST00000539721.5

TRAF3-204, Transcript of TNF receptor associated factor 3, humanhuman

TSL 2 BASIC

Gene TRAF3, Length 1,786 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-204ENST00000539721 ZNF73O43830 326 aaPredicted RBP10.14□□□□□ -0.79
TRAF3-204ENST00000539721 DIRC1Q969H9 104 aa10.14□□□□□ -0.79
TRAF3-204ENST00000539721 VAMP3Q15836 100 aa10.12□□□□□ -0.79
TRAF3-204ENST00000539721 CIRBP-AS1Q8TBR5 109 aa10.11□□□□□ -0.79
TRAF3-204ENST00000539721 SCXQ7RTU7 201 aa10.11□□□□□ -0.79
TRAF3-204ENST00000539721 SPCS1Q9Y6A9 102 aa10.11□□□□□ -0.79
TRAF3-204ENST00000539721 REG3GQ6UW15 175 aa10.1□□□□□ -0.79
TRAF3-204ENST00000539721 CLEC2BQ92478 149 aa10.1□□□□□ -0.79
TRAF3-204ENST00000539721 PKHD1P08F94 4074 aa10.09□□□□□ -0.79
TRAF3-204ENST00000539721 H0YGX0 51 aa10.09□□□□□ -0.79
TRAF3-204ENST00000539721 KRTAP11-1Q8IUC1 163 aa10.09□□□□□ -0.79
TRAF3-204ENST00000539721 HAMPP81172 84 aa10.09□□□□□ -0.79
TRAF3-204ENST00000539721 TCL1BO95988 128 aa10.08□□□□□ -0.8
TRAF3-204ENST00000539721 COX7BP24311 80 aa10.08□□□□□ -0.8
TRAF3-204ENST00000539721 TRBV7-6A0A0J9YX20 115 aa10.07□□□□□ -0.8
TRAF3-204ENST00000539721 ETDCA0A1B0GVM5 59 aa10.07□□□□□ -0.8
TRAF3-204ENST00000539721 SPRR1AP35321 89 aa10.07□□□□□ -0.8
TRAF3-204ENST00000539721 TRBV20-1A0A075B6N2 111 aa10.06□□□□□ -0.8
TRAF3-204ENST00000539721 K7EP34 96 aa10.06□□□□□ -0.8
TRAF3-204ENST00000539721 ELOF1P60002 83 aaKnown RBP10.06□□□□□ -0.8
TRAF3-204ENST00000539721 KRTAP4-16G5E9R7 235 aaPredicted RBP10.05□□□□□ -0.8
TRAF3-204ENST00000539721 ATXN8Q156A1 80 aa10.05□□□□□ -0.8
TRAF3-204ENST00000539721 GTF2H5Q6ZYL4 71 aa10.05□□□□□ -0.8
TRAF3-204ENST00000539721 FAM218AQ96MZ4 157 aa10.05□□□□□ -0.8
TRAF3-204ENST00000539721 LST1O00453 97 aa10.04□□□□□ -0.8
TRAF3-204ENST00000539721 DYNC1H1Q14204 4646 aaKnown RBP10.04□□□□□ -0.8
TRAF3-204ENST00000539721 LRP1BQ9NZR2 4599 aa10.04□□□□□ -0.8
TRAF3-204ENST00000539721 B5MCH6 92 aa10.03□□□□□ -0.8
TRAF3-204ENST00000539721 FAM19A1Q7Z5A9 133 aa10.03□□□□□ -0.8
TRAF3-204ENST00000539721 H3BMG7 143 aa10.02□□□□□ -0.81
TRAF3-204ENST00000539721 LINC00575Q6W349 94 aa10.02□□□□□ -0.81
TRAF3-204ENST00000539721 LINC00528Q8N1L1 170 aa10.02□□□□□ -0.81
TRAF3-204ENST00000539721 Q6ZRX8 168 aa10.01□□□□□ -0.81
TRAF3-204ENST00000539721 SLC25A20O43772 301 aa10.01□□□□□ -0.81
TRAF3-204ENST00000539721 PSORS1C2Q9UIG4 136 aa10.01□□□□□ -0.81
TRAF3-204ENST00000539721 BCE1O60756 84 aa10□□□□□ -0.81
TRAF3-204ENST00000539721 SNCGO76070 127 aa10□□□□□ -0.81
TRAF3-204ENST00000539721 A0A1B0GX51 115 aa9.99□□□□□ -0.81
TRAF3-204ENST00000539721 hADV29S1A0JD25 119 aa9.99□□□□□ -0.81
TRAF3-204ENST00000539721 TRACP01848 142 aa9.99□□□□□ -0.81
TRAF3-204ENST00000539721 PRLHP81277 87 aa9.99□□□□□ -0.81
TRAF3-204ENST00000539721 DNAL4O96015 105 aa9.98□□□□□ -0.81
TRAF3-204ENST00000539721 UBE2AP49459 152 aa9.98□□□□□ -0.81
TRAF3-204ENST00000539721 XGP55808 180 aa9.98□□□□□ -0.81
TRAF3-204ENST00000539721 UBE2V1Q13404 147 aa9.98□□□□□ -0.81
TRAF3-204ENST00000539721 C1orf137Q5JT78 98 aa9.98□□□□□ -0.81
TRAF3-204ENST00000539721 INAFM2P0DMQ5 153 aa9.97□□□□□ -0.81
TRAF3-204ENST00000539721 DHRS4-AS1Q9P1J3 65 aa9.97□□□□□ -0.81
TRAF3-204ENST00000539721 Q9BRP9 147 aa9.96□□□□□ -0.81
TRAF3-204ENST00000539721 C9JAW5 83 aa9.95□□□□□ -0.82
TRAF3-204ENST00000539721 H0Y9J4 135 aa9.95□□□□□ -0.82
TRAF3-204ENST00000539721 MTURNQ8N3F0 131 aa9.95□□□□□ -0.82
TRAF3-204ENST00000539721 SMCR5Q8TEV8 140 aa9.93□□□□□ -0.82
TRAF3-204ENST00000539721 HIGD2AQ9BW72 106 aa9.93□□□□□ -0.82
TRAF3-204ENST00000539721 Q6ZQY7 126 aa9.92□□□□□ -0.82
TRAF3-204ENST00000539721 KRTAP13-1Q8IUC0 172 aa9.92□□□□□ -0.82
TRAF3-204ENST00000539721 APOBP04114 4563 aaKnown RBP9.92□□□□□ -0.82
TRAF3-204ENST00000539721 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.91□□□□□ -0.82
TRAF3-204ENST00000539721 ERC2-IT1O76042 136 aa9.91□□□□□ -0.82
TRAF3-204ENST00000539721 ORMDL1Q9P0S3 153 aa9.91□□□□□ -0.82
TRAF3-204ENST00000539721 SMR3BP02814 79 aaPredicted RBP9.9□□□□□ -0.82
TRAF3-204ENST00000539721 IGLV7-43P04211 117 aa9.9□□□□□ -0.82
TRAF3-204ENST00000539721 PRO0461Q9UI25 63 aa9.9□□□□□ -0.82
TRAF3-204ENST00000539721 ZNF861PO60384 105 aa9.88□□□□□ -0.83
TRAF3-204ENST00000539721 BAALC-AS2P0C853 105 aa9.88□□□□□ -0.83
TRAF3-204ENST00000539721 F8W1H4 67 aa9.88□□□□□ -0.83
TRAF3-204ENST00000539721 H3BT86 120 aa9.87□□□□□ -0.83
TRAF3-204ENST00000539721 RPL37AP61513 92 aaKnown RBP9.87□□□□□ -0.83
TRAF3-204ENST00000539721 OCIAD2Q56VL3 154 aa9.87□□□□□ -0.83
TRAF3-204ENST00000539721 ST20-AS1Q8NBB2 130 aa9.87□□□□□ -0.83
TRAF3-204ENST00000539721 CDK2AP2O75956 126 aa9.86□□□□□ -0.83
TRAF3-204ENST00000539721 SMCPP49901 116 aaPredicted RBP9.86□□□□□ -0.83
TRAF3-204ENST00000539721 ANKRD29Q8N6D5 301 aa9.86□□□□□ -0.83
TRAF3-204ENST00000539721 DEFB105AQ8NG35 78 aa9.86□□□□□ -0.83
TRAF3-204ENST00000539721 GHRHP01286 108 aa9.85□□□□□ -0.83
TRAF3-204ENST00000539721 H3BQ85 93 aa9.83□□□□□ -0.84
TRAF3-204ENST00000539721 TMEM256-PLSCR3K7ERE1 68 aa9.83□□□□□ -0.84
TRAF3-204ENST00000539721 EPPK1P58107 5090 aaKnown RBP9.82□□□□□ -0.84
TRAF3-204ENST00000539721 LINC01547P58512 204 aaPredicted RBP9.82□□□□□ -0.84
TRAF3-204ENST00000539721 IGLV5-48A0A075B6I7 105 aa9.81□□□□□ -0.84
TRAF3-204ENST00000539721 LINC01600Q96MT4 127 aa9.81□□□□□ -0.84
TRAF3-204ENST00000539721 Q8N377 158 aa9.8□□□□□ -0.84
TRAF3-204ENST00000539721 VPS13BQ7Z7G8 4022 aa9.8□□□□□ -0.84
TRAF3-204ENST00000539721 PPDPFLQ8WWR9 84 aa9.8□□□□□ -0.84
TRAF3-204ENST00000539721 TEX49A0A1B0GTD5 131 aa9.79□□□□□ -0.84
TRAF3-204ENST00000539721 ZNF706Q9Y5V0 76 aaPredicted RBP9.79□□□□□ -0.84
TRAF3-204ENST00000539721 GAGE2AQ6NT46 116 aa9.78□□□□□ -0.84
TRAF3-204ENST00000539721 SPRR4Q96PI1 79 aa9.78□□□□□ -0.84
TRAF3-204ENST00000539721 LAMTOR3Q9UHA4 124 aa9.78□□□□□ -0.84
TRAF3-204ENST00000539721 ETDBQ3ZM63 59 aa9.77□□□□□ -0.85
TRAF3-204ENST00000539721 FAM229AH3BQW9 127 aa9.76□□□□□ -0.85
TRAF3-204ENST00000539721 TEN1Q86WV5 123 aa9.75□□□□□ -0.85
TRAF3-204ENST00000539721 SRRM2Q9UQ35 2752 aaKnown RBP9.75□□□□□ -0.85
TRAF3-204ENST00000539721 A0A1B0GV72 72 aa9.75□□□□□ -0.85
TRAF3-204ENST00000539721 SPRR1BP22528 89 aa9.75□□□□□ -0.85
TRAF3-204ENST00000539721 NDUFV3P56181 108 aaKnown RBP9.75□□□□□ -0.85
TRAF3-204ENST00000539721 C3orf22Q8N5N4 141 aa9.75□□□□□ -0.85
TRAF3-204ENST00000539721 PLA2G1BP04054 148 aaKnown RBP9.74□□□□□ -0.85
TRAF3-204ENST00000539721 KRTAP10-4P60372 401 aaPredicted RBP9.74□□□□□ -0.85
TRAF3-204ENST00000539721 HSPG2P98160 4391 aa9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 227.3 ms