RNA–Protein interactions for RNA: ENST00000539522.2

CCDC42-202, Transcript of coiled-coil domain containing 42, humanhuman

TSL 1 (best) BASIC

Gene CCDC42, Length 1,087 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC42-202ENST00000539522 Q5VSD8 79 aa8.08□□□□□ -1.12
CCDC42-202ENST00000539522 FAM19A5Q7Z5A7 132 aaPredicted RBP8.08□□□□□ -1.12
CCDC42-202ENST00000539522 IGLV5-37A0A075B6J1 123 aa8.07□□□□□ -1.12
CCDC42-202ENST00000539522 A0A1W2PPM0 123 aa8.07□□□□□ -1.12
CCDC42-202ENST00000539522 NCR3O14931 201 aa8.07□□□□□ -1.12
CCDC42-202ENST00000539522 COX6CP09669 75 aa8.07□□□□□ -1.12
CCDC42-202ENST00000539522 SCGB1C2P0DMR2 95 aa8.07□□□□□ -1.12
CCDC42-202ENST00000539522 NAA38Q9BRA0 125 aaKnown RBP8.07□□□□□ -1.12
CCDC42-202ENST00000539522 RPL28P46779 137 aaKnown RBP8.06□□□□□ -1.12
CCDC42-202ENST00000539522 VAMP3Q15836 100 aa8.06□□□□□ -1.12
CCDC42-202ENST00000539522 LYRM7Q5U5X0 104 aa8.06□□□□□ -1.12
CCDC42-202ENST00000539522 NKAPP1Q8N9T2 125 aa8.06□□□□□ -1.12
CCDC42-202ENST00000539522 CBY1Q9Y3M2 126 aa8.06□□□□□ -1.12
CCDC42-202ENST00000539522 FAT3Q8TDW7 4589 aa8.06□□□□□ -1.12
CCDC42-202ENST00000539522 MYCBP2O75592 4640 aa8.06□□□□□ -1.12
CCDC42-202ENST00000539522 IGLV6-57P01721 117 aa8.05□□□□□ -1.12
CCDC42-202ENST00000539522 LRP1Q07954 4544 aaKnown RBP8.05□□□□□ -1.12
CCDC42-202ENST00000539522 M0QXV9 152 aa8.04□□□□□ -1.12
CCDC42-202ENST00000539522 SMIM11BQ8TCY0 68 aa8.04□□□□□ -1.12
CCDC42-202ENST00000539522 C22orf24Q9Y442 160 aa8.04□□□□□ -1.12
CCDC42-202ENST00000539522 TRBV20-1A0A075B6N2 111 aa8.02□□□□□ -1.13
CCDC42-202ENST00000539522 TRBV10-3A0A0K0K1G6 114 aa8.02□□□□□ -1.13
CCDC42-202ENST00000539522 GAGE10A6NGK3 116 aa8.02□□□□□ -1.13
CCDC42-202ENST00000539522 H0YGX0 51 aa8.02□□□□□ -1.13
CCDC42-202ENST00000539522 TRIAP1O43715 76 aa8.02□□□□□ -1.13
CCDC42-202ENST00000539522 GTF2H5Q6ZYL4 71 aa8.02□□□□□ -1.13
CCDC42-202ENST00000539522 MRPL55Q7Z7F7 128 aaKnown RBP8.02□□□□□ -1.13
CCDC42-202ENST00000539522 C7orf33Q8WU49 177 aa8.01□□□□□ -1.13
CCDC42-202ENST00000539522 PSORS1C2Q9UIG4 136 aa8.01□□□□□ -1.13
CCDC42-202ENST00000539522 SPCS1Q9Y6A9 102 aa8.01□□□□□ -1.13
CCDC42-202ENST00000539522 FAM229AH3BQW9 127 aa8□□□□□ -1.13
CCDC42-202ENST00000539522 RPL37AP61513 92 aaKnown RBP8□□□□□ -1.13
CCDC42-202ENST00000539522 LINC00167Q96N53 147 aa8□□□□□ -1.13
CCDC42-202ENST00000539522 K7EP34 96 aa7.99□□□□□ -1.13
CCDC42-202ENST00000539522 KCNQ1DNQ9H478 68 aa7.99□□□□□ -1.13
CCDC42-202ENST00000539522 IGLV1-50A0A075B6I6 118 aa7.98□□□□□ -1.13
CCDC42-202ENST00000539522 TRAV23DV6A0A075B6W5 121 aa7.98□□□□□ -1.13
CCDC42-202ENST00000539522 TRBV7-6A0A0J9YX20 115 aa7.98□□□□□ -1.13
CCDC42-202ENST00000539522 UBE2BP63146 152 aa7.98□□□□□ -1.13
CCDC42-202ENST00000539522 UBE2V1Q13404 147 aa7.98□□□□□ -1.13
CCDC42-202ENST00000539522 RPL37AP8A6NKH3 93 aa7.97□□□□□ -1.13
CCDC42-202ENST00000539522 TCL1BO95988 128 aa7.97□□□□□ -1.13
CCDC42-202ENST00000539522 ATXN8Q156A1 80 aa7.97□□□□□ -1.13
CCDC42-202ENST00000539522 C6orf99Q4VX62 202 aa7.97□□□□□ -1.13
CCDC42-202ENST00000539522 ZNF73O43830 326 aaPredicted RBP7.96□□□□□ -1.14
CCDC42-202ENST00000539522 SNCGO76070 127 aa7.96□□□□□ -1.14
CCDC42-202ENST00000539522 PRYO14603 147 aa7.95□□□□□ -1.14
CCDC42-202ENST00000539522 PLA2G1BP04054 148 aaKnown RBP7.95□□□□□ -1.14
CCDC42-202ENST00000539522 DIRC1Q969H9 104 aa7.95□□□□□ -1.14
CCDC42-202ENST00000539522 CLEC2BQ92478 149 aa7.94□□□□□ -1.14
CCDC42-202ENST00000539522 A0A1B0GX51 115 aa7.93□□□□□ -1.14
CCDC42-202ENST00000539522 H3BMG7 143 aa7.93□□□□□ -1.14
CCDC42-202ENST00000539522 LST1O00453 97 aa7.93□□□□□ -1.14
CCDC42-202ENST00000539522 COX7BP24311 80 aa7.93□□□□□ -1.14
CCDC42-202ENST00000539522 TRACP01848 142 aa7.92□□□□□ -1.14
CCDC42-202ENST00000539522 C1orf137Q5JT78 98 aa7.92□□□□□ -1.14
CCDC42-202ENST00000539522 TNXBP22105 4242 aa7.92□□□□□ -1.14
CCDC42-202ENST00000539522 INAFM2P0DMQ5 153 aa7.91□□□□□ -1.14
CCDC42-202ENST00000539522 SPRR1AP35321 89 aa7.91□□□□□ -1.14
CCDC42-202ENST00000539522 REG3GQ6UW15 175 aa7.91□□□□□ -1.14
CCDC42-202ENST00000539522 LINC00575Q6W349 94 aa7.91□□□□□ -1.14
CCDC42-202ENST00000539522 KRTAP13-1Q8IUC0 172 aa7.91□□□□□ -1.14
CCDC42-202ENST00000539522 FLG2Q5D862 2391 aaPredicted RBP7.9□□□□□ -1.14
CCDC42-202ENST00000539522 F8W1H4 67 aa7.9□□□□□ -1.14
CCDC42-202ENST00000539522 SLC25A20O43772 301 aa7.9□□□□□ -1.14
CCDC42-202ENST00000539522 IGLV7-43P04211 117 aa7.9□□□□□ -1.14
CCDC42-202ENST00000539522 ELOF1P60002 83 aaKnown RBP7.9□□□□□ -1.14
CCDC42-202ENST00000539522 FAM218AQ96MZ4 157 aa7.9□□□□□ -1.14
CCDC42-202ENST00000539522 ETDCA0A1B0GVM5 59 aa7.89□□□□□ -1.15
CCDC42-202ENST00000539522 KRTAP4-16G5E9R7 235 aaPredicted RBP7.89□□□□□ -1.15
CCDC42-202ENST00000539522 hADV29S1A0JD25 119 aa7.88□□□□□ -1.15
CCDC42-202ENST00000539522 BCE1O60756 84 aa7.88□□□□□ -1.15
CCDC42-202ENST00000539522 B5MCH6 92 aa7.87□□□□□ -1.15
CCDC42-202ENST00000539522 C9JAW5 83 aa7.87□□□□□ -1.15
CCDC42-202ENST00000539522 DNAL4O96015 105 aa7.87□□□□□ -1.15
CCDC42-202ENST00000539522 DHRS4-AS1Q9P1J3 65 aa7.86□□□□□ -1.15
CCDC42-202ENST00000539522 BAALC-AS2P0C853 105 aa7.85□□□□□ -1.15
CCDC42-202ENST00000539522 Q6ZRX8 168 aa7.85□□□□□ -1.15
CCDC42-202ENST00000539522 PRO0461Q9UI25 63 aa7.85□□□□□ -1.15
CCDC42-202ENST00000539522 H0Y9J4 135 aa7.84□□□□□ -1.15
CCDC42-202ENST00000539522 H3BQ85 93 aa7.84□□□□□ -1.15
CCDC42-202ENST00000539522 GHRHP01286 108 aa7.84□□□□□ -1.15
CCDC42-202ENST00000539522 SPINK6Q6UWN8 80 aa7.84□□□□□ -1.15
CCDC42-202ENST00000539522 FAM19A1Q7Z5A9 133 aa7.84□□□□□ -1.15
CCDC42-202ENST00000539522 LINC01600Q96MT4 127 aa7.84□□□□□ -1.15
CCDC42-202ENST00000539522 ZNF861PO60384 105 aa7.83□□□□□ -1.16
CCDC42-202ENST00000539522 UBE2AP49459 152 aa7.83□□□□□ -1.16
CCDC42-202ENST00000539522 PRLHP81277 87 aa7.83□□□□□ -1.16
CCDC42-202ENST00000539522 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP7.83□□□□□ -1.16
CCDC42-202ENST00000539522 ANKRD29Q8N6D5 301 aa7.83□□□□□ -1.16
CCDC42-202ENST00000539522 H3BT86 120 aa7.82□□□□□ -1.16
CCDC42-202ENST00000539522 KRTAP1-4P0C5Y4 121 aa7.82□□□□□ -1.16
CCDC42-202ENST00000539522 OCIAD2Q56VL3 154 aa7.82□□□□□ -1.16
CCDC42-202ENST00000539522 ORMDL1Q9P0S3 153 aa7.82□□□□□ -1.16
CCDC42-202ENST00000539522 HERC1Q15751 4861 aa7.82□□□□□ -1.16
CCDC42-202ENST00000539522 MT1HL1P0DM35 61 aa7.81□□□□□ -1.16
CCDC42-202ENST00000539522 SMCPP49901 116 aaPredicted RBP7.81□□□□□ -1.16
CCDC42-202ENST00000539522 TMEM256-PLSCR3K7ERE1 68 aa7.8□□□□□ -1.16
CCDC42-202ENST00000539522 MTURNQ8N3F0 131 aa7.8□□□□□ -1.16
CCDC42-202ENST00000539522 Q9BRP9 147 aa7.8□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms