RNA–Protein interactions for RNA: ENST00000539449.2

RTN4IP1-204, Transcript of reticulon 4 interacting protein 1, humanhuman

TSL 2 BASIC

Gene RTN4IP1, Length 814 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4IP1-204ENST00000539449 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.81□□□□□ -1.48
RTN4IP1-204ENST00000539449 FAM19A5Q7Z5A7 132 aaPredicted RBP5.8□□□□□ -1.48
RTN4IP1-204ENST00000539449 OR13C6PQ8NH95 151 aa5.8□□□□□ -1.48
RTN4IP1-204ENST00000539449 IGLV5-37A0A075B6J1 123 aa5.79□□□□□ -1.48
RTN4IP1-204ENST00000539449 TRAV13-2A0A0B4J235 113 aa5.79□□□□□ -1.48
RTN4IP1-204ENST00000539449 TRBV10-2A0A0K0K1G8 114 aa5.79□□□□□ -1.48
RTN4IP1-204ENST00000539449 GAGE10A6NGK3 116 aa5.79□□□□□ -1.48
RTN4IP1-204ENST00000539449 M0R378 163 aa5.79□□□□□ -1.48
RTN4IP1-204ENST00000539449 LBHQ53QV2 105 aaPredicted RBP5.79□□□□□ -1.48
RTN4IP1-204ENST00000539449 SMIM11BQ8TCY0 68 aa5.79□□□□□ -1.48
RTN4IP1-204ENST00000539449 C7orf33Q8WU49 177 aa5.79□□□□□ -1.48
RTN4IP1-204ENST00000539449 C22orf24Q9Y442 160 aa5.79□□□□□ -1.48
RTN4IP1-204ENST00000539449 TRBV10-3A0A0K0K1G6 114 aa5.78□□□□□ -1.48
RTN4IP1-204ENST00000539449 KRTAP10-1P60331 282 aa5.78□□□□□ -1.48
RTN4IP1-204ENST00000539449 LCE3BQ5TA77 95 aa5.78□□□□□ -1.48
RTN4IP1-204ENST00000539449 FAM30AQ9NZY2 134 aa5.78□□□□□ -1.48
RTN4IP1-204ENST00000539449 TRIAP1O43715 76 aa5.77□□□□□ -1.49
RTN4IP1-204ENST00000539449 IGLV6-57P01721 117 aa5.77□□□□□ -1.49
RTN4IP1-204ENST00000539449 Q1RN00 199 aa5.77□□□□□ -1.49
RTN4IP1-204ENST00000539449 PHF5AQ7RTV0 110 aaKnown RBP5.77□□□□□ -1.49
RTN4IP1-204ENST00000539449 KRTAP11-1Q8IUC1 163 aa5.77□□□□□ -1.49
RTN4IP1-204ENST00000539449 SPACA4Q8TDM5 124 aa5.77□□□□□ -1.49
RTN4IP1-204ENST00000539449 LINC00167Q96N53 147 aa5.77□□□□□ -1.49
RTN4IP1-204ENST00000539449 A0A1W2PPM0 123 aa5.76□□□□□ -1.49
RTN4IP1-204ENST00000539449 RPL37AP8A6NKH3 93 aa5.76□□□□□ -1.49
RTN4IP1-204ENST00000539449 S100A7L2Q5SY68 101 aa5.76□□□□□ -1.49
RTN4IP1-204ENST00000539449 NKAPP1Q8N9T2 125 aa5.76□□□□□ -1.49
RTN4IP1-204ENST00000539449 A0A087WYN8 130 aa5.75□□□□□ -1.49
RTN4IP1-204ENST00000539449 RPL28P46779 137 aaKnown RBP5.75□□□□□ -1.49
RTN4IP1-204ENST00000539449 PSMB2P49721 201 aa5.75□□□□□ -1.49
RTN4IP1-204ENST00000539449 Q5VSD8 79 aa5.75□□□□□ -1.49
RTN4IP1-204ENST00000539449 TMEM126AQ9H061 195 aa5.75□□□□□ -1.49
RTN4IP1-204ENST00000539449 IGLV1-50A0A075B6I6 118 aa5.74□□□□□ -1.49
RTN4IP1-204ENST00000539449 M0QXV9 152 aa5.74□□□□□ -1.49
RTN4IP1-204ENST00000539449 HAMPP81172 84 aa5.74□□□□□ -1.49
RTN4IP1-204ENST00000539449 MRPL55Q7Z7F7 128 aaKnown RBP5.74□□□□□ -1.49
RTN4IP1-204ENST00000539449 CLEC2BQ92478 149 aa5.74□□□□□ -1.49
RTN4IP1-204ENST00000539449 DPH3Q96FX2 82 aa5.74□□□□□ -1.49
RTN4IP1-204ENST00000539449 PKIGQ9Y2B9 76 aa5.74□□□□□ -1.49
RTN4IP1-204ENST00000539449 TCL1BO95988 128 aa5.73□□□□□ -1.49
RTN4IP1-204ENST00000539449 C6orf99Q4VX62 202 aa5.73□□□□□ -1.49
RTN4IP1-204ENST00000539449 FAM218AQ96MZ4 157 aa5.73□□□□□ -1.49
RTN4IP1-204ENST00000539449 TRAV23DV6A0A075B6W5 121 aa5.72□□□□□ -1.49
RTN4IP1-204ENST00000539449 SCGB1C2P0DMR2 95 aa5.72□□□□□ -1.49
RTN4IP1-204ENST00000539449 VAMP3Q15836 100 aa5.72□□□□□ -1.49
RTN4IP1-204ENST00000539449 PLAC8Q9NZF1 115 aa5.72□□□□□ -1.49
RTN4IP1-204ENST00000539449 LINC00474Q9P2X8 69 aa5.72□□□□□ -1.49
RTN4IP1-204ENST00000539449 SPCS1Q9Y6A9 102 aa5.72□□□□□ -1.49
RTN4IP1-204ENST00000539449 K7EP34 96 aa5.71□□□□□ -1.5
RTN4IP1-204ENST00000539449 FABP2P12104 132 aa5.71□□□□□ -1.5
RTN4IP1-204ENST00000539449 Q6ZSA8 131 aa5.71□□□□□ -1.5
RTN4IP1-204ENST00000539449 KRTAP19-1Q8IUB9 90 aa5.71□□□□□ -1.5
RTN4IP1-204ENST00000539449 KCNQ1DNQ9H478 68 aa5.71□□□□□ -1.5
RTN4IP1-204ENST00000539449 KRTAP4-16G5E9R7 235 aaPredicted RBP5.7□□□□□ -1.5
RTN4IP1-204ENST00000539449 ZNF73O43830 326 aaPredicted RBP5.7□□□□□ -1.5
RTN4IP1-204ENST00000539449 CIRBP-AS1Q8TBR5 109 aa5.7□□□□□ -1.5
RTN4IP1-204ENST00000539449 PRYO14603 147 aa5.69□□□□□ -1.5
RTN4IP1-204ENST00000539449 SPRR1AP35321 89 aa5.69□□□□□ -1.5
RTN4IP1-204ENST00000539449 SCXQ7RTU7 201 aa5.69□□□□□ -1.5
RTN4IP1-204ENST00000539449 DIRC1Q969H9 104 aa5.69□□□□□ -1.5
RTN4IP1-204ENST00000539449 KRTAP9-9Q9BYP9 154 aa5.69□□□□□ -1.5
RTN4IP1-204ENST00000539449 KRTAP9-4Q9BYQ2 154 aa5.69□□□□□ -1.5
RTN4IP1-204ENST00000539449 UBE2BP63146 152 aa5.68□□□□□ -1.5
RTN4IP1-204ENST00000539449 MTURNQ8N3F0 131 aa5.68□□□□□ -1.5
RTN4IP1-204ENST00000539449 B5MCH6 92 aa5.67□□□□□ -1.5
RTN4IP1-204ENST00000539449 H3BMG7 143 aa5.67□□□□□ -1.5
RTN4IP1-204ENST00000539449 LST1O00453 97 aa5.67□□□□□ -1.5
RTN4IP1-204ENST00000539449 COX6CP09669 75 aa5.67□□□□□ -1.5
RTN4IP1-204ENST00000539449 COX7BP24311 80 aa5.67□□□□□ -1.5
RTN4IP1-204ENST00000539449 XGP55808 180 aa5.67□□□□□ -1.5
RTN4IP1-204ENST00000539449 UBE2V1Q13404 147 aa5.67□□□□□ -1.5
RTN4IP1-204ENST00000539449 REG3GQ6UW15 175 aa5.67□□□□□ -1.5
RTN4IP1-204ENST00000539449 LINC00575Q6W349 94 aa5.67□□□□□ -1.5
RTN4IP1-204ENST00000539449 KRTAP29-1A8MX34 341 aaPredicted RBP5.66□□□□□ -1.5
RTN4IP1-204ENST00000539449 H0YGX0 51 aa5.66□□□□□ -1.5
RTN4IP1-204ENST00000539449 ELOF1P60002 83 aaKnown RBP5.66□□□□□ -1.5
RTN4IP1-204ENST00000539449 TRBV20-1A0A075B6N2 111 aa5.65□□□□□ -1.5
RTN4IP1-204ENST00000539449 TRBV7-6A0A0J9YX20 115 aa5.65□□□□□ -1.5
RTN4IP1-204ENST00000539449 ATXN8Q156A1 80 aa5.65□□□□□ -1.5
RTN4IP1-204ENST00000539449 LYRM7Q5U5X0 104 aa5.65□□□□□ -1.5
RTN4IP1-204ENST00000539449 Q9BRP9 147 aa5.65□□□□□ -1.5
RTN4IP1-204ENST00000539449 PRO0461Q9UI25 63 aa5.65□□□□□ -1.5
RTN4IP1-204ENST00000539449 LRP1Q07954 4544 aaKnown RBP5.65□□□□□ -1.51
RTN4IP1-204ENST00000539449 ETDCA0A1B0GVM5 59 aa5.64□□□□□ -1.51
RTN4IP1-204ENST00000539449 ERC2-IT1O76042 136 aa5.64□□□□□ -1.51
RTN4IP1-204ENST00000539449 PRLHP81277 87 aa5.64□□□□□ -1.51
RTN4IP1-204ENST00000539449 GTF2H5Q6ZYL4 71 aa5.64□□□□□ -1.51
RTN4IP1-204ENST00000539449 FAM19A1Q7Z5A9 133 aa5.64□□□□□ -1.51
RTN4IP1-204ENST00000539449 PSORS1C2Q9UIG4 136 aa5.64□□□□□ -1.51
RTN4IP1-204ENST00000539449 C9JAW5 83 aa5.63□□□□□ -1.51
RTN4IP1-204ENST00000539449 TRACP01848 142 aa5.63□□□□□ -1.51
RTN4IP1-204ENST00000539449 SMR3BP02814 79 aaPredicted RBP5.63□□□□□ -1.51
RTN4IP1-204ENST00000539449 Q6ZRX8 168 aa5.63□□□□□ -1.51
RTN4IP1-204ENST00000539449 CBY1Q9Y3M2 126 aa5.63□□□□□ -1.51
RTN4IP1-204ENST00000539449 LRP2P98164 4655 aa5.63□□□□□ -1.51
RTN4IP1-204ENST00000539449 hADV29S1A0JD25 119 aa5.62□□□□□ -1.51
RTN4IP1-204ENST00000539449 KRTAP13-1Q8IUC0 172 aa5.62□□□□□ -1.51
RTN4IP1-204ENST00000539449 SMCR5Q8TEV8 140 aa5.62□□□□□ -1.51
RTN4IP1-204ENST00000539449 FAT3Q8TDW7 4589 aa5.62□□□□□ -1.51
RTN4IP1-204ENST00000539449 BCE1O60756 84 aa5.61□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms