RNA–Protein interactions for RNA: ENST00000539338.6

CACNB1-206, Transcript of calcium voltage-gated channel auxiliary subunit beta 1, humanhuman

TSL 1 (best)

Gene CACNB1, Length 5,308 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB1-206ENST00000539338 LINC00528Q8N1L1 170 aa9.62□□□□□ -0.87
CACNB1-206ENST00000539338 TRAV22A0A0B4J277 110 aa9.62□□□□□ -0.87
CACNB1-206ENST00000539338 KRTAP10-3P60369 221 aa9.62□□□□□ -0.87
CACNB1-206ENST00000539338 IGLV1-50A0A075B6I6 118 aa9.61□□□□□ -0.87
CACNB1-206ENST00000539338 PRR34Q9NV39 138 aa9.61□□□□□ -0.87
CACNB1-206ENST00000539338 RANBP2P49792 3224 aaKnown RBP9.61□□□□□ -0.87
CACNB1-206ENST00000539338 KCNQ1DNQ9H478 68 aa9.6□□□□□ -0.87
CACNB1-206ENST00000539338 C15orf56Q8N910 161 aa9.6□□□□□ -0.87
CACNB1-206ENST00000539338 CHD9Q3L8U1 2897 aa9.59□□□□□ -0.87
CACNB1-206ENST00000539338 A0A1B0GU69 56 aa9.58□□□□□ -0.88
CACNB1-206ENST00000539338 ACYP2P14621 99 aa9.58□□□□□ -0.88
CACNB1-206ENST00000539338 LCE6AA0A183 80 aa9.57□□□□□ -0.88
CACNB1-206ENST00000539338 H3BPC8 53 aa9.57□□□□□ -0.88
CACNB1-206ENST00000539338 C9orf129Q5T035 196 aaKnown RBP9.57□□□□□ -0.88
CACNB1-206ENST00000539338 ZNF575Q86XF7 245 aa9.57□□□□□ -0.88
CACNB1-206ENST00000539338 MGAM2Q2M2H8 2515 aa9.56□□□□□ -0.88
CACNB1-206ENST00000539338 LINC00612Q8N6U2 182 aa9.56□□□□□ -0.88
CACNB1-206ENST00000539338 A0A0C4DFX4 3053 aa9.56□□□□□ -0.88
CACNB1-206ENST00000539338 LINC00313P59037 77 aa9.55□□□□□ -0.88
CACNB1-206ENST00000539338 A0A0G2JQZ4 141 aa9.55□□□□□ -0.88
CACNB1-206ENST00000539338 A0A1W2PNN7 141 aa9.55□□□□□ -0.88
CACNB1-206ENST00000539338 A8MWP4 228 aa9.54□□□□□ -0.88
CACNB1-206ENST00000539338 APLNQ9ULZ1 77 aa9.54□□□□□ -0.88
CACNB1-206ENST00000539338 A0A087WTM6 91 aa9.53□□□□□ -0.88
CACNB1-206ENST00000539338 IGFL1Q6UW32 110 aa9.53□□□□□ -0.88
CACNB1-206ENST00000539338 Q8N377 158 aa9.53□□□□□ -0.88
CACNB1-206ENST00000539338 SMR3BP02814 79 aaPredicted RBP9.52□□□□□ -0.88
CACNB1-206ENST00000539338 CFAP54Q96N23 3096 aa9.51□□□□□ -0.89
CACNB1-206ENST00000539338 LAMA3Q16787 3333 aa9.5□□□□□ -0.89
CACNB1-206ENST00000539338 MKI67P46013 3256 aaKnown RBP9.49□□□□□ -0.89
CACNB1-206ENST00000539338 FLNAP21333 2647 aaKnown RBP9.49□□□□□ -0.89
CACNB1-206ENST00000539338 ERC2-IT1O76042 136 aa9.48□□□□□ -0.89
CACNB1-206ENST00000539338 ATP11AUNQ6ZP68 121 aa9.47□□□□□ -0.89
CACNB1-206ENST00000539338 IGLV8-61A0A075B6I0 122 aa9.47□□□□□ -0.89
CACNB1-206ENST00000539338 MRPL34Q9BQ48 92 aaKnown RBP9.46□□□□□ -0.89
CACNB1-206ENST00000539338 BRCA2P51587 3418 aa9.45□□□□□ -0.9
CACNB1-206ENST00000539338 SETXQ7Z333 2677 aaKnown RBP9.45□□□□□ -0.9
CACNB1-206ENST00000539338 Q96NJ1 140 aa9.45□□□□□ -0.9
CACNB1-206ENST00000539338 KLKP1Q107X0 134 aa9.45□□□□□ -0.9
CACNB1-206ENST00000539338 MAST4O15021 2626 aa9.44□□□□□ -0.9
CACNB1-206ENST00000539338 A8MUN3 132 aa9.44□□□□□ -0.9
CACNB1-206ENST00000539338 CENPEQ02224 2701 aa9.44□□□□□ -0.9
CACNB1-206ENST00000539338 LAMA2P24043 3122 aaKnown RBP9.43□□□□□ -0.9
CACNB1-206ENST00000539338 LOC101927531A0A1B0GV80 90 aa9.43□□□□□ -0.9
CACNB1-206ENST00000539338 WIPF1O43516 503 aa9.43□□□□□ -0.9
CACNB1-206ENST00000539338 PRR15Q8IV56 129 aa9.43□□□□□ -0.9
CACNB1-206ENST00000539338 COA5Q86WW8 74 aa9.43□□□□□ -0.9
CACNB1-206ENST00000539338 ITPR3Q14573 2671 aa9.42□□□□□ -0.9
CACNB1-206ENST00000539338 TLX1NBP0CAT3 122 aa9.41□□□□□ -0.9
CACNB1-206ENST00000539338 LINC00304Q8N9R0 145 aa9.41□□□□□ -0.9
CACNB1-206ENST00000539338 H7BZZ5 65 aa9.4□□□□□ -0.9
CACNB1-206ENST00000539338 TRANK1O15050 2925 aa9.4□□□□□ -0.9
CACNB1-206ENST00000539338 C8orf17Q9NRJ1 99 aa9.4□□□□□ -0.9
CACNB1-206ENST00000539338 FAM104AQ969W3 186 aa9.39□□□□□ -0.91
CACNB1-206ENST00000539338 ANAPC11Q9NYG5 84 aa9.39□□□□□ -0.91
CACNB1-206ENST00000539338 PLA2G2DQ9UNK4 145 aa9.39□□□□□ -0.91
CACNB1-206ENST00000539338 C8orf87E5RJ46 101 aa9.39□□□□□ -0.91
CACNB1-206ENST00000539338 DSCR10P59022 87 aa9.39□□□□□ -0.91
CACNB1-206ENST00000539338 ATRQ13535 2644 aa9.38□□□□□ -0.91
CACNB1-206ENST00000539338 A0A1W2PNM2 257 aa9.38□□□□□ -0.91
CACNB1-206ENST00000539338 C9orf163Q8N9P6 203 aa9.37□□□□□ -0.91
CACNB1-206ENST00000539338 ZNF861PO60384 105 aa9.36□□□□□ -0.91
CACNB1-206ENST00000539338 MGAQ8IWI9 3026 aa9.36□□□□□ -0.91
CACNB1-206ENST00000539338 OBSCN-AS1Q96MR7 158 aa9.35□□□□□ -0.91
CACNB1-206ENST00000539338 A0A1B0GVX0 72 aa9.34□□□□□ -0.91
CACNB1-206ENST00000539338 PSORS1C2Q9UIG4 136 aa9.32□□□□□ -0.92
CACNB1-206ENST00000539338 TNP2Q05952 138 aa9.31□□□□□ -0.92
CACNB1-206ENST00000539338 LINC01600Q96MT4 127 aa9.3□□□□□ -0.92
CACNB1-206ENST00000539338 CFAP46Q8IYW2 2715 aa9.3□□□□□ -0.92
CACNB1-206ENST00000539338 UNC80Q8N2C7 3258 aa9.29□□□□□ -0.92
CACNB1-206ENST00000539338 SSBP3-AS1Q7Z2R9 100 aa9.28□□□□□ -0.92
CACNB1-206ENST00000539338 PRUNE2Q8WUY3 3088 aa9.28□□□□□ -0.92
CACNB1-206ENST00000539338 CYP4F30PQ9H0H9 118 aa9.27□□□□□ -0.92
CACNB1-206ENST00000539338 WDFY4Q6ZS81 3184 aa9.27□□□□□ -0.93
CACNB1-206ENST00000539338 CNBPP62633 177 aaKnown RBP9.27□□□□□ -0.93
CACNB1-206ENST00000539338 IGLV5-48A0A075B6I7 105 aa9.26□□□□□ -0.93
CACNB1-206ENST00000539338 SPRR4Q96PI1 79 aa9.25□□□□□ -0.93
CACNB1-206ENST00000539338 IGLV7-43P04211 117 aa9.24□□□□□ -0.93
CACNB1-206ENST00000539338 AKAP13Q12802 2813 aa9.23□□□□□ -0.93
CACNB1-206ENST00000539338 C9orf92A6NGG3 77 aa9.23□□□□□ -0.93
CACNB1-206ENST00000539338 CR1P17927 2039 aa9.22□□□□□ -0.93
CACNB1-206ENST00000539338 IGLV5-37A0A075B6J1 123 aa9.22□□□□□ -0.93
CACNB1-206ENST00000539338 UQCR11O14957 56 aa9.22□□□□□ -0.93
CACNB1-206ENST00000539338 XIRP2A4UGR9 3374 aa9.21□□□□□ -0.94
CACNB1-206ENST00000539338 RBM12B-AS1Q9P1G2 102 aa9.21□□□□□ -0.94
CACNB1-206ENST00000539338 CHD6Q8TD26 2715 aa9.2□□□□□ -0.94
CACNB1-206ENST00000539338 M0R2T5 61 aa9.19□□□□□ -0.94
CACNB1-206ENST00000539338 Q5VSD8 79 aa9.19□□□□□ -0.94
CACNB1-206ENST00000539338 TRIOO75962 3097 aa9.19□□□□□ -0.94
CACNB1-206ENST00000539338 Q8NDZ9 215 aa9.18□□□□□ -0.94
CACNB1-206ENST00000539338 OCR1Q9BZK8 76 aa9.18□□□□□ -0.94
CACNB1-206ENST00000539338 ZNF292O60281 2723 aa9.17□□□□□ -0.94
CACNB1-206ENST00000539338 MIR22HGQ0VDD5 57 aa9.15□□□□□ -0.94
CACNB1-206ENST00000539338 OXTP01178 125 aa9.15□□□□□ -0.94
CACNB1-206ENST00000539338 IGLV7-46A0A075B6I9 117 aa9.12□□□□□ -0.95
CACNB1-206ENST00000539338 SPANXA2-OT1Q8N9U9 137 aa9.12□□□□□ -0.95
CACNB1-206ENST00000539338 VPS13AQ96RL7 3174 aa9.11□□□□□ -0.95
CACNB1-206ENST00000539338 MAP1AP78559 2803 aaPredicted RBP9.1□□□□□ -0.95
CACNB1-206ENST00000539338 CDH23Q9H251 3354 aa9.1□□□□□ -0.95
CACNB1-206ENST00000539338 TEP1Q99973 2627 aaKnown RBP9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms