RNA–Protein interactions for RNA: ENST00000539232.1

LMO3-220, Transcript of LIM domain only 3, humanhuman

TSL 5

Gene LMO3, Length 580 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-220ENST00000539232 KRTAP10-4P60372 401 aaPredicted RBP4.66□□□□□ -1.66
LMO3-220ENST00000539232 CIRBPQ14011 172 aaKnown RBP4.66□□□□□ -1.66
LMO3-220ENST00000539232 SCXQ7RTU7 201 aa4.66□□□□□ -1.66
LMO3-220ENST00000539232 FAM104AQ969W3 186 aa4.66□□□□□ -1.66
LMO3-220ENST00000539232 LITAFQ99732 161 aa4.66□□□□□ -1.66
LMO3-220ENST00000539232 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP4.66□□□□□ -1.66
LMO3-220ENST00000539232 IGHV1-58A0A0C4DH39 117 aa4.65□□□□□ -1.67
LMO3-220ENST00000539232 RNASE13Q5GAN3 156 aaKnown RBP4.65□□□□□ -1.67
LMO3-220ENST00000539232 C15orf56Q8N910 161 aa4.65□□□□□ -1.67
LMO3-220ENST00000539232 TRBV10-3A0A0K0K1G6 114 aa4.64□□□□□ -1.67
LMO3-220ENST00000539232 hADV29S1A0JD25 119 aa4.64□□□□□ -1.67
LMO3-220ENST00000539232 H7C2G1 150 aa4.64□□□□□ -1.67
LMO3-220ENST00000539232 ATP5EP56381 51 aaPredicted RBP4.64□□□□□ -1.67
LMO3-220ENST00000539232 NPC2P61916 151 aa4.64□□□□□ -1.67
LMO3-220ENST00000539232 HIGD2BQ4VC39 106 aa4.64□□□□□ -1.67
LMO3-220ENST00000539232 Q5XG85 94 aa4.64□□□□□ -1.67
LMO3-220ENST00000539232 CIRBP-AS1Q8TBR5 109 aa4.64□□□□□ -1.67
LMO3-220ENST00000539232 CHCHD10Q8WYQ3 142 aaPredicted RBP4.64□□□□□ -1.67
LMO3-220ENST00000539232 OPRPNQ99935 248 aaPredicted RBP4.64□□□□□ -1.67
LMO3-220ENST00000539232 SERP1Q9Y6X1 66 aa4.64□□□□□ -1.67
LMO3-220ENST00000539232 TINCRA0A1B0GVN0 87 aa4.63□□□□□ -1.67
LMO3-220ENST00000539232 UBE2L6O14933 153 aa4.63□□□□□ -1.67
LMO3-220ENST00000539232 CHTF8P0CG12 524 aa4.63□□□□□ -1.67
LMO3-220ENST00000539232 XCL1P47992 114 aa4.63□□□□□ -1.67
LMO3-220ENST00000539232 LINC00528Q8N1L1 170 aa4.63□□□□□ -1.67
LMO3-220ENST00000539232 SMCR5Q8TEV8 140 aa4.63□□□□□ -1.67
LMO3-220ENST00000539232 LRP1Q07954 4544 aaKnown RBP4.63□□□□□ -1.67
LMO3-220ENST00000539232 LINC00959A0A1B0GUT2 108 aa4.62□□□□□ -1.67
LMO3-220ENST00000539232 NDUFA1O15239 70 aa4.62□□□□□ -1.67
LMO3-220ENST00000539232 PLA2G1BP04054 148 aaKnown RBP4.62□□□□□ -1.67
LMO3-220ENST00000539232 PRSS2P07478 247 aa4.62□□□□□ -1.67
LMO3-220ENST00000539232 BAALC-AS2P0C853 105 aa4.62□□□□□ -1.67
LMO3-220ENST00000539232 RPL39P62891 51 aaKnown RBP4.62□□□□□ -1.67
LMO3-220ENST00000539232 C9orf163Q8N9P6 203 aa4.62□□□□□ -1.67
LMO3-220ENST00000539232 OBSCN-AS1Q96MR7 158 aa4.62□□□□□ -1.67
LMO3-220ENST00000539232 CDC42SE2Q9NRR3 84 aa4.62□□□□□ -1.67
LMO3-220ENST00000539232 NDUFA12Q9UI09 145 aa4.62□□□□□ -1.67
LMO3-220ENST00000539232 FAT4Q6V0I7 4981 aa4.62□□□□□ -1.67
LMO3-220ENST00000539232 IGLV4-3A0A075B6K6 122 aa4.61□□□□□ -1.67
LMO3-220ENST00000539232 DNAL4O96015 105 aa4.61□□□□□ -1.67
LMO3-220ENST00000539232 CLEC2BQ92478 149 aa4.61□□□□□ -1.67
LMO3-220ENST00000539232 UBE2D4Q9Y2X8 147 aa4.61□□□□□ -1.67
LMO3-220ENST00000539232 PKHD1L1Q86WI1 4243 aa4.6□□□□□ -1.67
LMO3-220ENST00000539232 SMIM26A0A096LP01 95 aa4.6□□□□□ -1.67
LMO3-220ENST00000539232 TRAV13-2A0A0B4J235 113 aa4.6□□□□□ -1.67
LMO3-220ENST00000539232 H0YGX0 51 aa4.6□□□□□ -1.67
LMO3-220ENST00000539232 NDUFC1O43677 76 aa4.6□□□□□ -1.67
LMO3-220ENST00000539232 PFN2P35080 140 aa4.6□□□□□ -1.67
LMO3-220ENST00000539232 CNBPP62633 177 aaKnown RBP4.6□□□□□ -1.67
LMO3-220ENST00000539232 MUC2Q02817 5179 aa4.59□□□□□ -1.67
LMO3-220ENST00000539232 IGLV5-45A0A087WSX0 123 aa4.59□□□□□ -1.67
LMO3-220ENST00000539232 FAM236DA0A1B0GTK5 79 aa4.59□□□□□ -1.67
LMO3-220ENST00000539232 FAM236CP0DP71 79 aa4.59□□□□□ -1.67
LMO3-220ENST00000539232 RPL28P46779 137 aaKnown RBP4.59□□□□□ -1.67
LMO3-220ENST00000539232 C4orf26Q17RF5 130 aa4.59□□□□□ -1.67
LMO3-220ENST00000539232 C14orf177Q52M58 125 aa4.59□□□□□ -1.67
LMO3-220ENST00000539232 DGAT2L7PQ6IED9 249 aa4.59□□□□□ -1.67
LMO3-220ENST00000539232 HRCT1Q6UXD1 115 aa4.59□□□□□ -1.67
LMO3-220ENST00000539232 FAM19A3Q7Z5A8 133 aa4.59□□□□□ -1.67
LMO3-220ENST00000539232 LAMTOR3Q9UHA4 124 aa4.59□□□□□ -1.67
LMO3-220ENST00000539232 GVQW2A0A096LPI5 108 aaPredicted RBP4.58□□□□□ -1.68
LMO3-220ENST00000539232 A0A0J9YXV3 536 aa4.58□□□□□ -1.68
LMO3-220ENST00000539232 COX6A2Q02221 97 aa4.58□□□□□ -1.68
LMO3-220ENST00000539232 A0A087WYN8 130 aa4.57□□□□□ -1.68
LMO3-220ENST00000539232 ADAMTSL4-AS1Q5T5F5 129 aa4.57□□□□□ -1.68
LMO3-220ENST00000539232 CD164L2Q6UWJ8 174 aa4.57□□□□□ -1.68
LMO3-220ENST00000539232 LINC00308Q8TCZ7 52 aa4.57□□□□□ -1.68
LMO3-220ENST00000539232 DSCR8Q96T75 97 aa4.57□□□□□ -1.68
LMO3-220ENST00000539232 V9GYY9 64 aa4.57□□□□□ -1.68
LMO3-220ENST00000539232 TRAV7A0A075B6U4 112 aa4.56□□□□□ -1.68
LMO3-220ENST00000539232 A0A096LNI7 61 aa4.56□□□□□ -1.68
LMO3-220ENST00000539232 IGKV2-24A0A0C4DH68 120 aa4.56□□□□□ -1.68
LMO3-220ENST00000539232 IGLV5-39A0A0G2JS06 123 aa4.56□□□□□ -1.68
LMO3-220ENST00000539232 JMJD7-PLA2G4BH0Y9G9 81 aa4.56□□□□□ -1.68
LMO3-220ENST00000539232 SPACA4Q8TDM5 124 aa4.56□□□□□ -1.68
LMO3-220ENST00000539232 IGHV3-64A0A075B6Q5 118 aa4.55□□□□□ -1.68
LMO3-220ENST00000539232 H3BQ85 93 aa4.55□□□□□ -1.68
LMO3-220ENST00000539232 KLKP1Q107X0 134 aa4.55□□□□□ -1.68
LMO3-220ENST00000539232 SS18Q15532 418 aa4.55□□□□□ -1.68
LMO3-220ENST00000539232 C10orf25Q5T742 122 aa4.55□□□□□ -1.68
LMO3-220ENST00000539232 Q6ZRU5 148 aa4.55□□□□□ -1.68
LMO3-220ENST00000539232 LINC01561Q8N1V8 128 aa4.55□□□□□ -1.68
LMO3-220ENST00000539232 C22orf24Q9Y442 160 aa4.55□□□□□ -1.68
LMO3-220ENST00000539232 FAT3Q8TDW7 4589 aa4.55□□□□□ -1.68
LMO3-220ENST00000539232 IGHV3OR16-9A0A0B4J2B5 98 aa4.54□□□□□ -1.68
LMO3-220ENST00000539232 CCKP06307 115 aa4.54□□□□□ -1.68
LMO3-220ENST00000539232 A0A1W2PNN7 141 aa4.53□□□□□ -1.68
LMO3-220ENST00000539232 ERC2-IT1O76042 136 aa4.53□□□□□ -1.68
LMO3-220ENST00000539232 GHRHP01286 108 aa4.53□□□□□ -1.68
LMO3-220ENST00000539232 SEC61GP60059 68 aa4.53□□□□□ -1.68
LMO3-220ENST00000539232 RPL37AP61513 92 aaKnown RBP4.53□□□□□ -1.68
LMO3-220ENST00000539232 SYCNQ0VAF6 134 aa4.53□□□□□ -1.68
LMO3-220ENST00000539232 LINC00242Q5T6M2 205 aa4.53□□□□□ -1.68
LMO3-220ENST00000539232 PLAC8Q9NZF1 115 aa4.53□□□□□ -1.68
LMO3-220ENST00000539232 CRCT1Q9UGL9 99 aa4.53□□□□□ -1.68
LMO3-220ENST00000539232 C1orf195Q5TG92 126 aa4.52□□□□□ -1.69
LMO3-220ENST00000539232 UNQ6190/PRO20217Q6UXQ8 127 aa4.52□□□□□ -1.69
LMO3-220ENST00000539232 KRTAP11-1Q8IUC1 163 aa4.52□□□□□ -1.69
LMO3-220ENST00000539232 CYSTM1Q9H1C7 97 aa4.52□□□□□ -1.69
LMO3-220ENST00000539232 LINC00846Q9NV44 126 aa4.52□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms