RNA–Protein interactions for RNA: ENST00000538995.1

RTN3-209, Transcript of reticulon 3, humanhuman

TSL 2

Gene RTN3, Length 814 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-209ENST00000538995 LINC00304Q8N9R0 145 aa6.76□□□□□ -1.33
RTN3-209ENST00000538995 SPANXB1Q9NS25 103 aaPredicted RBP6.76□□□□□ -1.33
RTN3-209ENST00000538995 ETDCA0A1B0GVM5 59 aa6.75□□□□□ -1.33
RTN3-209ENST00000538995 KRTAP4-16G5E9R7 235 aaPredicted RBP6.75□□□□□ -1.33
RTN3-209ENST00000538995 NDUFC2O95298 119 aa6.75□□□□□ -1.33
RTN3-209ENST00000538995 TSPAN13O95857 204 aa6.75□□□□□ -1.33
RTN3-209ENST00000538995 SPRR4Q96PI1 79 aa6.75□□□□□ -1.33
RTN3-209ENST00000538995 DDTP30046 118 aa6.74□□□□□ -1.33
RTN3-209ENST00000538995 LINC01545Q5VT33 79 aa6.74□□□□□ -1.33
RTN3-209ENST00000538995 PET117Q6UWS5 81 aa6.74□□□□□ -1.33
RTN3-209ENST00000538995 A0A0J9YXY3 114 aa6.73□□□□□ -1.33
RTN3-209ENST00000538995 COA6Q5JTJ3 125 aaKnown RBP6.73□□□□□ -1.33
RTN3-209ENST00000538995 IGLV6-57P01721 117 aa6.72□□□□□ -1.33
RTN3-209ENST00000538995 TIMM17BO60830 172 aa6.71□□□□□ -1.34
RTN3-209ENST00000538995 SMCR5Q8TEV8 140 aa6.71□□□□□ -1.34
RTN3-209ENST00000538995 B5MCH6 92 aa6.7□□□□□ -1.34
RTN3-209ENST00000538995 LINC00483Q53H64 154 aa6.7□□□□□ -1.34
RTN3-209ENST00000538995 S100A7L2Q5SY68 101 aa6.7□□□□□ -1.34
RTN3-209ENST00000538995 ADAMTSL4-AS1Q5T5F5 129 aa6.7□□□□□ -1.34
RTN3-209ENST00000538995 SPAG11AQ6PDA7 123 aa6.7□□□□□ -1.34
RTN3-209ENST00000538995 SOSTDC1Q6X4U4 206 aa6.7□□□□□ -1.34
RTN3-209ENST00000538995 C3orf22Q8N5N4 141 aa6.7□□□□□ -1.34
RTN3-209ENST00000538995 C3orf79P0CE67 100 aa6.69□□□□□ -1.34
RTN3-209ENST00000538995 Q6ZRX8 168 aa6.69□□□□□ -1.34
RTN3-209ENST00000538995 LITAFQ99732 161 aa6.69□□□□□ -1.34
RTN3-209ENST00000538995 TRAV23DV6A0A075B6W5 121 aa6.68□□□□□ -1.34
RTN3-209ENST00000538995 AKR1D1P51857 326 aa6.68□□□□□ -1.34
RTN3-209ENST00000538995 SPANXCQ9NY87 97 aa6.68□□□□□ -1.34
RTN3-209ENST00000538995 C20orf202A1L168 122 aa6.67□□□□□ -1.34
RTN3-209ENST00000538995 ZNF815PA8K554 130 aa6.67□□□□□ -1.34
RTN3-209ENST00000538995 EIF4EBP3O60516 100 aaPredicted RBP6.67□□□□□ -1.34
RTN3-209ENST00000538995 PCP4P48539 62 aa6.67□□□□□ -1.34
RTN3-209ENST00000538995 NPC2P61916 151 aa6.67□□□□□ -1.34
RTN3-209ENST00000538995 JOSD1Q15040 202 aaPredicted RBP6.67□□□□□ -1.34
RTN3-209ENST00000538995 LINC00308Q8TCZ7 52 aa6.67□□□□□ -1.34
RTN3-209ENST00000538995 ZNF73O43830 326 aaPredicted RBP6.66□□□□□ -1.34
RTN3-209ENST00000538995 KRTDAPP60985 99 aa6.66□□□□□ -1.34
RTN3-209ENST00000538995 Q9BRP9 147 aa6.66□□□□□ -1.34
RTN3-209ENST00000538995 PPDPFQ9H3Y8 114 aa6.65□□□□□ -1.34
RTN3-209ENST00000538995 C5orf52A6NGY3 159 aa6.64□□□□□ -1.35
RTN3-209ENST00000538995 ERC2-IT1O76042 136 aa6.64□□□□□ -1.35
RTN3-209ENST00000538995 HINT1P49773 126 aaPredicted RBP6.64□□□□□ -1.35
RTN3-209ENST00000538995 TPRXLQ17RH7 258 aa6.64□□□□□ -1.35
RTN3-209ENST00000538995 GAGE2AQ6NT46 116 aa6.64□□□□□ -1.35
RTN3-209ENST00000538995 Q8NBF4 154 aa6.64□□□□□ -1.35
RTN3-209ENST00000538995 RETNLBQ9BQ08 111 aa6.64□□□□□ -1.35
RTN3-209ENST00000538995 SPANXDQ9BXN6 97 aa6.64□□□□□ -1.35
RTN3-209ENST00000538995 IGLV7-46A0A075B6I9 117 aa6.62□□□□□ -1.35
RTN3-209ENST00000538995 SPINK1P00995 79 aa6.62□□□□□ -1.35
RTN3-209ENST00000538995 FP248Q71RG6 208 aaPredicted RBP6.62□□□□□ -1.35
RTN3-209ENST00000538995 SSBP3-AS1Q7Z2R9 100 aa6.62□□□□□ -1.35
RTN3-209ENST00000538995 COPS9Q8WXC6 57 aa6.62□□□□□ -1.35
RTN3-209ENST00000538995 TTTY13Q9BZ97 58 aa6.62□□□□□ -1.35
RTN3-209ENST00000538995 MUC2Q02817 5179 aa6.62□□□□□ -1.35
RTN3-209ENST00000538995 RPS29P62273 56 aaKnown RBP6.61□□□□□ -1.35
RTN3-209ENST00000538995 SCGB1D4Q6XE38 83 aa6.61□□□□□ -1.35
RTN3-209ENST00000538995 OR13C6PQ8NH95 151 aa6.61□□□□□ -1.35
RTN3-209ENST00000538995 IFITM1P13164 125 aa6.6□□□□□ -1.35
RTN3-209ENST00000538995 MOBPQ13875 183 aa6.6□□□□□ -1.35
RTN3-209ENST00000538995 Q6ZVH6 145 aa6.6□□□□□ -1.35
RTN3-209ENST00000538995 DHRS4-AS1Q9P1J3 65 aa6.6□□□□□ -1.35
RTN3-209ENST00000538995 IGLV9-49A0A0B4J1Y8 123 aa6.59□□□□□ -1.35
RTN3-209ENST00000538995 SNRPEP62304 92 aaKnown RBP6.59□□□□□ -1.35
RTN3-209ENST00000538995 LCE3BQ5TA77 95 aa6.58□□□□□ -1.36
RTN3-209ENST00000538995 CDIP1Q9H305 208 aa6.58□□□□□ -1.36
RTN3-209ENST00000538995 GHRHP01286 108 aa6.57□□□□□ -1.36
RTN3-209ENST00000538995 ELOF1P60002 83 aaKnown RBP6.57□□□□□ -1.36
RTN3-209ENST00000538995 SLC25A34Q6PIV7 304 aa6.57□□□□□ -1.36
RTN3-209ENST00000538995 ATOH7Q8N100 152 aa6.57□□□□□ -1.36
RTN3-209ENST00000538995 TRBV7-6A0A0J9YX20 115 aa6.56□□□□□ -1.36
RTN3-209ENST00000538995 HSBP1L1C9JCN9 74 aa6.56□□□□□ -1.36
RTN3-209ENST00000538995 SPRR1BP22528 89 aa6.56□□□□□ -1.36
RTN3-209ENST00000538995 COX7BP24311 80 aa6.56□□□□□ -1.36
RTN3-209ENST00000538995 HIST3H2BBQ8N257 126 aa6.56□□□□□ -1.36
RTN3-209ENST00000538995 ST20-AS1Q8NBB2 130 aa6.56□□□□□ -1.36
RTN3-209ENST00000538995 MUC17Q685J3 4493 aa6.55□□□□□ -1.36
RTN3-209ENST00000538995 A0A0U1RQV1 116 aa6.55□□□□□ -1.36
RTN3-209ENST00000538995 S100A2P29034 98 aa6.55□□□□□ -1.36
RTN3-209ENST00000538995 C6orf99Q4VX62 202 aa6.55□□□□□ -1.36
RTN3-209ENST00000538995 C9orf153Q5TBE3 101 aa6.55□□□□□ -1.36
RTN3-209ENST00000538995 PCP2Q8IVA1 136 aa6.55□□□□□ -1.36
RTN3-209ENST00000538995 HIST1H2BLQ99880 126 aa6.55□□□□□ -1.36
RTN3-209ENST00000538995 A0A1B0GV90 55 aa6.53□□□□□ -1.36
RTN3-209ENST00000538995 SLC25A20O43772 301 aa6.53□□□□□ -1.36
RTN3-209ENST00000538995 Q8N377 158 aa6.53□□□□□ -1.36
RTN3-209ENST00000538995 TRAV13-2A0A0B4J235 113 aa6.52□□□□□ -1.37
RTN3-209ENST00000538995 A0A1B0GWB2 263 aa6.52□□□□□ -1.37
RTN3-209ENST00000538995 C21orf62-AS1Q17RA5 79 aa6.52□□□□□ -1.37
RTN3-209ENST00000538995 KRTAP13-3Q3SY46 172 aa6.52□□□□□ -1.37
RTN3-209ENST00000538995 MUSTN1Q8IVN3 82 aa6.52□□□□□ -1.37
RTN3-209ENST00000538995 C14orf144Q96I85 54 aa6.52□□□□□ -1.37
RTN3-209ENST00000538995 KRTAP4-12Q9BQ66 201 aa6.52□□□□□ -1.37
RTN3-209ENST00000538995 A6NDN8 102 aa6.51□□□□□ -1.37
RTN3-209ENST00000538995 LAMTOR3Q9UHA4 124 aa6.51□□□□□ -1.37
RTN3-209ENST00000538995 A4D1N5 150 aa6.5□□□□□ -1.37
RTN3-209ENST00000538995 TEX49A0A1B0GTD5 131 aa6.49□□□□□ -1.37
RTN3-209ENST00000538995 TSTD3H0UI37 97 aa6.49□□□□□ -1.37
RTN3-209ENST00000538995 TAL2Q16559 108 aa6.48□□□□□ -1.37
RTN3-209ENST00000538995 LIMD2Q9BT23 127 aa6.48□□□□□ -1.37
RTN3-209ENST00000538995 NHP2Q9NX24 153 aaKnown RBP6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 88.6 ms