RNA–Protein interactions for RNA: ENST00000538909.1

CBX3P4-201, Transcript of chromobox 3 pseudogene 4, humanhuman

BASIC

Gene CBX3P4, Length 354 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3P4-201ENST00000538909 WFDC10AQ9H1F0 79 aa1.21□□□□□ -2.22
CBX3P4-201ENST00000538909 TMEM14CQ9P0S9 112 aa1.21□□□□□ -2.22
CBX3P4-201ENST00000538909 LINC00474Q9P2X8 69 aa1.21□□□□□ -2.22
CBX3P4-201ENST00000538909 RYR1P21817 5038 aa1.21□□□□□ -2.22
CBX3P4-201ENST00000538909 BIRC6Q9NR09 4857 aa1.2□□□□□ -2.22
CBX3P4-201ENST00000538909 IGHV3OR16-8A0A075B7F1 116 aa1.2□□□□□ -2.22
CBX3P4-201ENST00000538909 IGHV3-49A0A0A0MS15 119 aa1.2□□□□□ -2.22
CBX3P4-201ENST00000538909 IGHV3-35A0A0C4DH35 117 aa1.2□□□□□ -2.22
CBX3P4-201ENST00000538909 TRBV6-1A0A0K0K1D8 114 aa1.2□□□□□ -2.22
CBX3P4-201ENST00000538909 hDV103S1A0JD37 113 aa1.2□□□□□ -2.22
CBX3P4-201ENST00000538909 A6NN06 94 aa1.2□□□□□ -2.22
CBX3P4-201ENST00000538909 C3orf84H3BNL1 204 aa1.2□□□□□ -2.22
CBX3P4-201ENST00000538909 SLC25A20O43772 301 aa1.2□□□□□ -2.22
CBX3P4-201ENST00000538909 MGST1P10620 155 aaKnown RBP1.2□□□□□ -2.22
CBX3P4-201ENST00000538909 NPPCP23582 126 aa1.2□□□□□ -2.22
CBX3P4-201ENST00000538909 ESRGQ1W209 222 aa1.2□□□□□ -2.22
CBX3P4-201ENST00000538909 PSMG4Q5JS54 123 aa1.2□□□□□ -2.22
CBX3P4-201ENST00000538909 GDF5OSQ5U4N7 250 aa1.2□□□□□ -2.22
CBX3P4-201ENST00000538909 C2orf66Q6UXQ4 117 aa1.2□□□□□ -2.22
CBX3P4-201ENST00000538909 C2orf91Q6ZV80 131 aa1.2□□□□□ -2.22
CBX3P4-201ENST00000538909 TMEM141Q96I45 108 aa1.2□□□□□ -2.22
CBX3P4-201ENST00000538909 B9D2Q9BPU9 175 aa1.2□□□□□ -2.22
CBX3P4-201ENST00000538909 ZNF355PQ9NSJ1 428 aa1.2□□□□□ -2.22
CBX3P4-201ENST00000538909 MRPL35Q9NZE8 188 aaKnown RBP1.2□□□□□ -2.22
CBX3P4-201ENST00000538909 NDUFA12Q9UI09 145 aa1.2□□□□□ -2.22
CBX3P4-201ENST00000538909 IGLV8-61A0A075B6I0 122 aa1.19□□□□□ -2.22
CBX3P4-201ENST00000538909 IGLV4-3A0A075B6K6 122 aa1.19□□□□□ -2.22
CBX3P4-201ENST00000538909 IGKV2D-26A0A0A0MRZ7 120 aa1.19□□□□□ -2.22
CBX3P4-201ENST00000538909 TRAV13-2A0A0B4J235 113 aa1.19□□□□□ -2.22
CBX3P4-201ENST00000538909 A0A0B4J2C4 111 aa1.19□□□□□ -2.22
CBX3P4-201ENST00000538909 IGHV3-16A0A0C4DH30 117 aa1.19□□□□□ -2.22
CBX3P4-201ENST00000538909 A0A0J9YX75 114 aa1.19□□□□□ -2.22
CBX3P4-201ENST00000538909 CTXND1A0A1B0GTU2 59 aa1.19□□□□□ -2.22
CBX3P4-201ENST00000538909 IBA57-AS1B1ANH7 110 aa1.19□□□□□ -2.22
CBX3P4-201ENST00000538909 M0R3E3 92 aa1.19□□□□□ -2.22
CBX3P4-201ENST00000538909 NPYP01303 97 aa1.19□□□□□ -2.22
CBX3P4-201ENST00000538909 CRPP02741 224 aa1.19□□□□□ -2.22
CBX3P4-201ENST00000538909 FCER1GP30273 86 aa1.19□□□□□ -2.22
CBX3P4-201ENST00000538909 RPL28P46779 137 aaKnown RBP1.19□□□□□ -2.22
CBX3P4-201ENST00000538909 XCL1P47992 114 aa1.19□□□□□ -2.22
CBX3P4-201ENST00000538909 DEFB1P60022 68 aa1.19□□□□□ -2.22
CBX3P4-201ENST00000538909 Q1T7F1 81 aa1.19□□□□□ -2.22
CBX3P4-201ENST00000538909 PRR9Q5T870 116 aa1.19□□□□□ -2.22
CBX3P4-201ENST00000538909 C20orf197Q8N268 126 aa1.19□□□□□ -2.22
CBX3P4-201ENST00000538909 LYPD1Q8N2G4 141 aa1.19□□□□□ -2.22
CBX3P4-201ENST00000538909 FAM19A2Q8N3H0 131 aa1.19□□□□□ -2.22
CBX3P4-201ENST00000538909 ZFAND2AQ8N6M9 145 aa1.19□□□□□ -2.22
CBX3P4-201ENST00000538909 Q8NAQ8 132 aa1.19□□□□□ -2.22
CBX3P4-201ENST00000538909 LINC00467Q9BRT7 94 aa1.19□□□□□ -2.22
CBX3P4-201ENST00000538909 CYSTM1Q9H1C7 97 aa1.19□□□□□ -2.22
CBX3P4-201ENST00000538909 XAGE1AQ9HD64 81 aa1.19□□□□□ -2.22
CBX3P4-201ENST00000538909 HERC2O95714 4834 aa1.19□□□□□ -2.22
CBX3P4-201ENST00000538909 PKHD1L1Q86WI1 4243 aa1.19□□□□□ -2.22
CBX3P4-201ENST00000538909 KIAA1109Q2LD37 5005 aa1.18□□□□□ -2.22
CBX3P4-201ENST00000538909 IGHV3-66A0A0C4DH42 116 aa1.18□□□□□ -2.22
CBX3P4-201ENST00000538909 TRBV10-3A0A0K0K1G6 114 aa1.18□□□□□ -2.22
CBX3P4-201ENST00000538909 MYMXA0A1B0GTQ4 84 aa1.18□□□□□ -2.22
CBX3P4-201ENST00000538909 C19orf71A6NCJ1 209 aa1.18□□□□□ -2.22
CBX3P4-201ENST00000538909 ZNF815PA8K554 130 aa1.18□□□□□ -2.22
CBX3P4-201ENST00000538909 A8MWP4 228 aa1.18□□□□□ -2.22
CBX3P4-201ENST00000538909 HCG22E2RYF7 251 aa1.18□□□□□ -2.22
CBX3P4-201ENST00000538909 F8WEM9 126 aa1.18□□□□□ -2.22
CBX3P4-201ENST00000538909 CHKB-CPT1BH3BT56 60 aa1.18□□□□□ -2.22
CBX3P4-201ENST00000538909 GNRH2O43555 120 aa1.18□□□□□ -2.22
CBX3P4-201ENST00000538909 SH2D1AO60880 128 aa1.18□□□□□ -2.22
CBX3P4-201ENST00000538909 LEPROTL1O95214 131 aa1.18□□□□□ -2.22
CBX3P4-201ENST00000538909 ARL14EPLP0DKL9 152 aa1.18□□□□□ -2.22
CBX3P4-201ENST00000538909 CRIP1P50238 77 aa1.18□□□□□ -2.22
CBX3P4-201ENST00000538909 FXYD2P54710 66 aa1.18□□□□□ -2.22
CBX3P4-201ENST00000538909 DEFB131AP59861 70 aa1.18□□□□□ -2.22
CBX3P4-201ENST00000538909 SYCNQ0VAF6 134 aa1.18□□□□□ -2.22
CBX3P4-201ENST00000538909 ATXN8Q156A1 80 aa1.18□□□□□ -2.22
CBX3P4-201ENST00000538909 PRR4Q16378 134 aa1.18□□□□□ -2.22
CBX3P4-201ENST00000538909 MIAQ16674 131 aa1.18□□□□□ -2.22
CBX3P4-201ENST00000538909 RNASE13Q5GAN3 156 aaKnown RBP1.18□□□□□ -2.22
CBX3P4-201ENST00000538909 C10orf113Q5VZT2 155 aa1.18□□□□□ -2.22
CBX3P4-201ENST00000538909 CASC2Q6XLA1 102 aa1.18□□□□□ -2.22
CBX3P4-201ENST00000538909 ADM2Q7Z4H4 148 aa1.18□□□□□ -2.22
CBX3P4-201ENST00000538909 TIMM21Q9BVV7 248 aa1.18□□□□□ -2.22
CBX3P4-201ENST00000538909 CNFNQ9BYD5 112 aa1.18□□□□□ -2.22
CBX3P4-201ENST00000538909 C8orf17Q9NRJ1 99 aa1.18□□□□□ -2.22
CBX3P4-201ENST00000538909 TMEM167BQ9NRX6 74 aa1.18□□□□□ -2.22
CBX3P4-201ENST00000538909 PRO1854Q9UHT4 67 aa1.18□□□□□ -2.22
CBX3P4-201ENST00000538909 LENEPQ9Y5L5 61 aa1.18□□□□□ -2.22
CBX3P4-201ENST00000538909 FAT3Q8TDW7 4589 aa1.18□□□□□ -2.22
CBX3P4-201ENST00000538909 TRAV7A0A075B6U4 112 aa1.17□□□□□ -2.22
CBX3P4-201ENST00000538909 IGKV2-40A0A087WW87 121 aaPredicted RBP1.17□□□□□ -2.22
CBX3P4-201ENST00000538909 IGHV3-73A0A0B4J1V6 119 aa1.17□□□□□ -2.22
CBX3P4-201ENST00000538909 TEX49A0A1B0GTD5 131 aa1.17□□□□□ -2.22
CBX3P4-201ENST00000538909 TMEM223A0PJW6 202 aa1.17□□□□□ -2.22
CBX3P4-201ENST00000538909 C16orf90A8MZG2 172 aa1.17□□□□□ -2.22
CBX3P4-201ENST00000538909 H7BZZ5 65 aa1.17□□□□□ -2.22
CBX3P4-201ENST00000538909 IGKV2D-40P01614 121 aaPredicted RBP1.17□□□□□ -2.22
CBX3P4-201ENST00000538909 COX6CP09669 75 aa1.17□□□□□ -2.22
CBX3P4-201ENST00000538909 RNASE3P12724 160 aaKnown RBP1.17□□□□□ -2.22
CBX3P4-201ENST00000538909 IFI27P40305 119 aaPredicted RBP1.17□□□□□ -2.22
CBX3P4-201ENST00000538909 ASB16-AS1Q495Z4 193 aa1.17□□□□□ -2.22
CBX3P4-201ENST00000538909 C9orf116Q5BN46 136 aaPredicted RBP1.17□□□□□ -2.22
CBX3P4-201ENST00000538909 C1orf134Q5TEV5 83 aa1.17□□□□□ -2.22
CBX3P4-201ENST00000538909 LYPD5Q6UWN5 251 aa1.17□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms