RNA–Protein interactions for RNA: ENST00000538809.6

RAB40B-202, Transcript of RAB40B, member RAS oncogene family, humanhuman

TSL 2 BASIC

Gene RAB40B, Length 704 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-202ENST00000538809 ZNF815PA8K554 130 aa8.58□□□□□ -1.04
RAB40B-202ENST00000538809 KRTDAPP60985 99 aa8.58□□□□□ -1.04
RAB40B-202ENST00000538809 S100A7L2Q5SY68 101 aa8.58□□□□□ -1.04
RAB40B-202ENST00000538809 Q6ZRX8 168 aa8.58□□□□□ -1.04
RAB40B-202ENST00000538809 Q8NBF4 154 aa8.58□□□□□ -1.04
RAB40B-202ENST00000538809 IGLV7-46A0A075B6I9 117 aa8.57□□□□□ -1.04
RAB40B-202ENST00000538809 TRAV23DV6A0A075B6W5 121 aa8.57□□□□□ -1.04
RAB40B-202ENST00000538809 GAGE2AQ6NT46 116 aa8.57□□□□□ -1.04
RAB40B-202ENST00000538809 SPANXCQ9NY87 97 aa8.57□□□□□ -1.04
RAB40B-202ENST00000538809 MUC2Q02817 5179 aa8.56□□□□□ -1.04
RAB40B-202ENST00000538809 ANKRD39Q53RE8 183 aa8.56□□□□□ -1.04
RAB40B-202ENST00000538809 C4orf48Q5BLP8 95 aa8.55□□□□□ -1.04
RAB40B-202ENST00000538809 SPAG11AQ6PDA7 123 aa8.55□□□□□ -1.04
RAB40B-202ENST00000538809 IGLV9-49A0A0B4J1Y8 123 aa8.54□□□□□ -1.04
RAB40B-202ENST00000538809 ZNF73O43830 326 aaPredicted RBP8.54□□□□□ -1.04
RAB40B-202ENST00000538809 MOBPQ13875 183 aa8.54□□□□□ -1.04
RAB40B-202ENST00000538809 TPRXLQ17RH7 258 aa8.54□□□□□ -1.04
RAB40B-202ENST00000538809 CDIP1Q9H305 208 aa8.54□□□□□ -1.04
RAB40B-202ENST00000538809 C20orf202A1L168 122 aa8.53□□□□□ -1.04
RAB40B-202ENST00000538809 SPANXDQ9BXN6 97 aa8.52□□□□□ -1.05
RAB40B-202ENST00000538809 MUC17Q685J3 4493 aa8.52□□□□□ -1.05
RAB40B-202ENST00000538809 JOSD1Q15040 202 aaPredicted RBP8.51□□□□□ -1.05
RAB40B-202ENST00000538809 ATOH7Q8N100 152 aa8.51□□□□□ -1.05
RAB40B-202ENST00000538809 S100A1P23297 94 aa8.5□□□□□ -1.05
RAB40B-202ENST00000538809 HIST3H2BBQ8N257 126 aa8.5□□□□□ -1.05
RAB40B-202ENST00000538809 CBY1Q9Y3M2 126 aa8.5□□□□□ -1.05
RAB40B-202ENST00000538809 PCP2Q8IVA1 136 aa8.49□□□□□ -1.05
RAB40B-202ENST00000538809 AKR1D1P51857 326 aa8.48□□□□□ -1.05
RAB40B-202ENST00000538809 SCGB1D4Q6XE38 83 aa8.48□□□□□ -1.05
RAB40B-202ENST00000538809 ST20-AS1Q8NBB2 130 aa8.48□□□□□ -1.05
RAB40B-202ENST00000538809 OR13C6PQ8NH95 151 aa8.48□□□□□ -1.05
RAB40B-202ENST00000538809 HIST1H2BLQ99880 126 aa8.48□□□□□ -1.05
RAB40B-202ENST00000538809 C5orf52A6NGY3 159 aa8.47□□□□□ -1.05
RAB40B-202ENST00000538809 SPINK1P00995 79 aa8.47□□□□□ -1.05
RAB40B-202ENST00000538809 FP248Q71RG6 208 aaPredicted RBP8.47□□□□□ -1.05
RAB40B-202ENST00000538809 SSBP3-AS1Q7Z2R9 100 aa8.47□□□□□ -1.05
RAB40B-202ENST00000538809 LINC00518Q8N0U6 118 aa8.47□□□□□ -1.05
RAB40B-202ENST00000538809 A0A0U1RQV1 116 aa8.46□□□□□ -1.06
RAB40B-202ENST00000538809 C9orf153Q5TBE3 101 aa8.46□□□□□ -1.06
RAB40B-202ENST00000538809 IFITM1P13164 125 aa8.45□□□□□ -1.06
RAB40B-202ENST00000538809 HINT1P49773 126 aaPredicted RBP8.45□□□□□ -1.06
RAB40B-202ENST00000538809 SNRPEP62304 92 aaKnown RBP8.45□□□□□ -1.06
RAB40B-202ENST00000538809 Q6ZVH6 145 aa8.45□□□□□ -1.06
RAB40B-202ENST00000538809 SPRR1BP22528 89 aa8.44□□□□□ -1.06
RAB40B-202ENST00000538809 ELOF1P60002 83 aaKnown RBP8.44□□□□□ -1.06
RAB40B-202ENST00000538809 RPS29P62273 56 aaKnown RBP8.43□□□□□ -1.06
RAB40B-202ENST00000538809 KRTAP13-3Q3SY46 172 aa8.43□□□□□ -1.06
RAB40B-202ENST00000538809 DHRS4-AS1Q9P1J3 65 aa8.43□□□□□ -1.06
RAB40B-202ENST00000538809 C6orf99Q4VX62 202 aa8.42□□□□□ -1.06
RAB40B-202ENST00000538809 MUSTN1Q8IVN3 82 aa8.42□□□□□ -1.06
RAB40B-202ENST00000538809 Q8N377 158 aa8.42□□□□□ -1.06
RAB40B-202ENST00000538809 COPS9Q8WXC6 57 aa8.42□□□□□ -1.06
RAB40B-202ENST00000538809 FAT4Q6V0I7 4981 aa8.42□□□□□ -1.06
RAB40B-202ENST00000538809 COX7BP24311 80 aa8.41□□□□□ -1.06
RAB40B-202ENST00000538809 S100A2P29034 98 aa8.41□□□□□ -1.06
RAB40B-202ENST00000538809 TRBV7-6A0A0J9YX20 115 aa8.4□□□□□ -1.06
RAB40B-202ENST00000538809 SLC25A20O43772 301 aa8.37□□□□□ -1.07
RAB40B-202ENST00000538809 S100A6P06703 90 aa8.37□□□□□ -1.07
RAB40B-202ENST00000538809 A0A1B0GWB2 263 aa8.36□□□□□ -1.07
RAB40B-202ENST00000538809 A6NDN8 102 aa8.35□□□□□ -1.07
RAB40B-202ENST00000538809 HRCT1Q6UXD1 115 aa8.35□□□□□ -1.07
RAB40B-202ENST00000538809 TRAV13-2A0A0B4J235 113 aa8.34□□□□□ -1.07
RAB40B-202ENST00000538809 HSBP1L1C9JCN9 74 aa8.34□□□□□ -1.07
RAB40B-202ENST00000538809 LINC01547P58512 204 aaPredicted RBP8.34□□□□□ -1.07
RAB40B-202ENST00000538809 SLC25A34Q6PIV7 304 aa8.34□□□□□ -1.07
RAB40B-202ENST00000538809 Q1RN00 199 aa8.33□□□□□ -1.08
RAB40B-202ENST00000538809 LCE2AQ5TA79 106 aaPredicted RBP8.33□□□□□ -1.08
RAB40B-202ENST00000538809 DEFB105AQ8NG35 78 aa8.33□□□□□ -1.08
RAB40B-202ENST00000538809 SMIM11BQ8TCY0 68 aa8.33□□□□□ -1.08
RAB40B-202ENST00000538809 IGLV5-48A0A075B6I7 105 aa8.32□□□□□ -1.08
RAB40B-202ENST00000538809 SMIM29Q86T20 159 aa8.32□□□□□ -1.08
RAB40B-202ENST00000538809 LAMTOR3Q9UHA4 124 aa8.32□□□□□ -1.08
RAB40B-202ENST00000538809 TEX49A0A1B0GTD5 131 aa8.31□□□□□ -1.08
RAB40B-202ENST00000538809 TAL2Q16559 108 aa8.31□□□□□ -1.08
RAB40B-202ENST00000538809 ASB16-AS1Q495Z4 193 aa8.31□□□□□ -1.08
RAB40B-202ENST00000538809 A4D1N5 150 aa8.3□□□□□ -1.08
RAB40B-202ENST00000538809 SCGB1D1O95968 90 aa8.29□□□□□ -1.08
RAB40B-202ENST00000538809 COX8AP10176 69 aa8.28□□□□□ -1.08
RAB40B-202ENST00000538809 LIMD2Q9BT23 127 aa8.28□□□□□ -1.08
RAB40B-202ENST00000538809 KRTAP4-1Q9BYQ7 146 aa8.28□□□□□ -1.08
RAB40B-202ENST00000538809 SEC61BP60468 96 aaKnown RBP8.27□□□□□ -1.09
RAB40B-202ENST00000538809 XP32Q5T750 250 aa8.27□□□□□ -1.09
RAB40B-202ENST00000538809 DLEU1O43261 78 aa8.26□□□□□ -1.09
RAB40B-202ENST00000538809 CD164Q04900 197 aa8.26□□□□□ -1.09
RAB40B-202ENST00000538809 PRO1933Q9H354 126 aa8.25□□□□□ -1.09
RAB40B-202ENST00000538809 NHP2Q9NX24 153 aaKnown RBP8.25□□□□□ -1.09
RAB40B-202ENST00000538809 A0A0G2JQZ4 141 aa8.24□□□□□ -1.09
RAB40B-202ENST00000538809 H7C2G1 150 aa8.24□□□□□ -1.09
RAB40B-202ENST00000538809 LINC00575Q6W349 94 aa8.24□□□□□ -1.09
RAB40B-202ENST00000538809 Q5XG85 94 aa8.22□□□□□ -1.09
RAB40B-202ENST00000538809 HIST1H4GQ99525 98 aa8.22□□□□□ -1.09
RAB40B-202ENST00000538809 C9orf92A6NGG3 77 aa8.21□□□□□ -1.1
RAB40B-202ENST00000538809 VAMP3Q15836 100 aa8.21□□□□□ -1.1
RAB40B-202ENST00000538809 C12orf57Q99622 126 aa8.21□□□□□ -1.1
RAB40B-202ENST00000538809 C14orf144Q96I85 54 aa8.2□□□□□ -1.1
RAB40B-202ENST00000538809 KRTAP9-2Q9BYQ4 174 aa8.19□□□□□ -1.1
RAB40B-202ENST00000538809 HIGD1BQ9P298 99 aa8.19□□□□□ -1.1
RAB40B-202ENST00000538809 hADV29S1A0JD25 119 aa8.18□□□□□ -1.1
RAB40B-202ENST00000538809 SPATA45Q537H7 98 aa8.18□□□□□ -1.1
RAB40B-202ENST00000538809 Q6ZQY7 126 aa8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 84.2 ms