RNA–Protein interactions for RNA: ENST00000538548.5

SFSWAP-207, Transcript of splicing factor SWAP, humanhuman

TSL 5

Gene SFSWAP, Length 2,636 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-207ENST00000538548 VPREB1P12018 145 aa12.36□□□□□ -0.43
SFSWAP-207ENST00000538548 Q6ZTC4 211 aa12.36□□□□□ -0.43
SFSWAP-207ENST00000538548 LELP1Q5T871 98 aa12.36□□□□□ -0.43
SFSWAP-207ENST00000538548 KLK12Q9UKR0 248 aa12.36□□□□□ -0.43
SFSWAP-207ENST00000538548 BAHCC1Q9P281 2608 aa12.35□□□□□ -0.43
SFSWAP-207ENST00000538548 INAFM1C9JVW0 142 aa12.34□□□□□ -0.43
SFSWAP-207ENST00000538548 M0R378 163 aa12.34□□□□□ -0.43
SFSWAP-207ENST00000538548 HIGD2BQ4VC39 106 aa12.34□□□□□ -0.43
SFSWAP-207ENST00000538548 DEFB4AO15263 64 aa12.32□□□□□ -0.44
SFSWAP-207ENST00000538548 DAD1P61803 113 aa12.32□□□□□ -0.44
SFSWAP-207ENST00000538548 HIGD2AQ9BW72 106 aa12.32□□□□□ -0.44
SFSWAP-207ENST00000538548 F8WDY8 70 aa12.31□□□□□ -0.44
SFSWAP-207ENST00000538548 C1orf195Q5TG92 126 aa12.3□□□□□ -0.44
SFSWAP-207ENST00000538548 C3orf84H3BNL1 204 aa12.29□□□□□ -0.44
SFSWAP-207ENST00000538548 CAMK2N2Q96S95 79 aa12.28□□□□□ -0.44
SFSWAP-207ENST00000538548 EGFEM1PQ0D2K5 195 aa12.27□□□□□ -0.44
SFSWAP-207ENST00000538548 DEFB135Q30KP9 77 aa12.27□□□□□ -0.45
SFSWAP-207ENST00000538548 STAB1Q9NY15 2570 aa12.27□□□□□ -0.45
SFSWAP-207ENST00000538548 LCE6AA0A183 80 aa12.24□□□□□ -0.45
SFSWAP-207ENST00000538548 MAST4O15021 2626 aa12.24□□□□□ -0.45
SFSWAP-207ENST00000538548 SMIM29Q86T20 159 aa12.24□□□□□ -0.45
SFSWAP-207ENST00000538548 IGLV5-48A0A075B6I7 105 aa12.23□□□□□ -0.45
SFSWAP-207ENST00000538548 A0A1B0GW54 56 aa12.23□□□□□ -0.45
SFSWAP-207ENST00000538548 hDV103S1A0JD37 113 aa12.23□□□□□ -0.45
SFSWAP-207ENST00000538548 V9GYY9 64 aa12.22□□□□□ -0.45
SFSWAP-207ENST00000538548 HTN3P15516 51 aa12.22□□□□□ -0.45
SFSWAP-207ENST00000538548 KPRPQ5T749 579 aaPredicted RBP12.22□□□□□ -0.45
SFSWAP-207ENST00000538548 FAM30AQ9NZY2 134 aa12.22□□□□□ -0.45
SFSWAP-207ENST00000538548 FBN1P35555 2871 aaKnown RBP12.21□□□□□ -0.45
SFSWAP-207ENST00000538548 KRTAP10-3P60369 221 aa12.21□□□□□ -0.45
SFSWAP-207ENST00000538548 Q6ZRU5 148 aa12.21□□□□□ -0.45
SFSWAP-207ENST00000538548 PKD1L1Q8TDX9 2849 aa12.21□□□□□ -0.45
SFSWAP-207ENST00000538548 Q8N377 158 aa12.2□□□□□ -0.46
SFSWAP-207ENST00000538548 Q8NAQ8 132 aa12.19□□□□□ -0.46
SFSWAP-207ENST00000538548 DEFB105AQ8NG35 78 aa12.18□□□□□ -0.46
SFSWAP-207ENST00000538548 SPART-AS1P0CW21 52 aa12.17□□□□□ -0.46
SFSWAP-207ENST00000538548 APOC4P55056 127 aa12.17□□□□□ -0.46
SFSWAP-207ENST00000538548 KCNQ1DNQ9H478 68 aa12.17□□□□□ -0.46
SFSWAP-207ENST00000538548 Q1T7F1 81 aa12.16□□□□□ -0.46
SFSWAP-207ENST00000538548 KRTAP26-1Q6PEX3 210 aa12.15□□□□□ -0.46
SFSWAP-207ENST00000538548 COL6A5A8TX70 2615 aa12.15□□□□□ -0.46
SFSWAP-207ENST00000538548 Q6ZRP5 223 aa12.15□□□□□ -0.46
SFSWAP-207ENST00000538548 C15orf56Q8N910 161 aa12.15□□□□□ -0.46
SFSWAP-207ENST00000538548 ZCCHC13Q8WW36 166 aaKnown RBP12.15□□□□□ -0.46
SFSWAP-207ENST00000538548 C1orf64Q8NEQ6 169 aa12.14□□□□□ -0.47
SFSWAP-207ENST00000538548 A0A1W2PNM2 257 aa12.14□□□□□ -0.47
SFSWAP-207ENST00000538548 PRR15Q8IV56 129 aa12.13□□□□□ -0.47
SFSWAP-207ENST00000538548 ETDCA0A1B0GVM5 59 aa12.11□□□□□ -0.47
SFSWAP-207ENST00000538548 NKAPP1Q8N9T2 125 aa12.11□□□□□ -0.47
SFSWAP-207ENST00000538548 DHRS4-AS1Q9P1J3 65 aa12.1□□□□□ -0.47
SFSWAP-207ENST00000538548 LRCOL1A6NCL2 159 aa12.09□□□□□ -0.47
SFSWAP-207ENST00000538548 SEC61GP60059 68 aa12.09□□□□□ -0.47
SFSWAP-207ENST00000538548 TNP2Q05952 138 aa12.09□□□□□ -0.47
SFSWAP-207ENST00000538548 C1orf137Q5JT78 98 aa12.09□□□□□ -0.47
SFSWAP-207ENST00000538548 WFDC10BQ8IUB3 73 aa12.09□□□□□ -0.47
SFSWAP-207ENST00000538548 Q8NBF4 154 aa12.09□□□□□ -0.47
SFSWAP-207ENST00000538548 C7orf33Q8WU49 177 aa12.08□□□□□ -0.47
SFSWAP-207ENST00000538548 NOTCH1P46531 2555 aa12.08□□□□□ -0.48
SFSWAP-207ENST00000538548 DSCR10P59022 87 aa12.07□□□□□ -0.48
SFSWAP-207ENST00000538548 SPRR4Q96PI1 79 aa12.07□□□□□ -0.48
SFSWAP-207ENST00000538548 Q6ZRX8 168 aa12.07□□□□□ -0.48
SFSWAP-207ENST00000538548 CYP4F30PQ9H0H9 118 aa12.06□□□□□ -0.48
SFSWAP-207ENST00000538548 IGLV2-33A0A075B6J2 118 aaPredicted RBP12.06□□□□□ -0.48
SFSWAP-207ENST00000538548 SERTAD4-AS1Q5TG53 156 aa12.06□□□□□ -0.48
SFSWAP-207ENST00000538548 K7EQZ3 153 aa12.04□□□□□ -0.48
SFSWAP-207ENST00000538548 SYCNQ0VAF6 134 aa12.04□□□□□ -0.48
SFSWAP-207ENST00000538548 Q9BRP9 147 aa12.04□□□□□ -0.48
SFSWAP-207ENST00000538548 KRTAP4-16G5E9R7 235 aaPredicted RBP12.01□□□□□ -0.49
SFSWAP-207ENST00000538548 TRAV22A0A0B4J277 110 aa12.01□□□□□ -0.49
SFSWAP-207ENST00000538548 HCG22E2RYF7 251 aa12□□□□□ -0.49
SFSWAP-207ENST00000538548 ANK2Q01484 3957 aa11.99□□□□□ -0.49
SFSWAP-207ENST00000538548 PSPHP1O15172 72 aa11.99□□□□□ -0.49
SFSWAP-207ENST00000538548 PMAIP1Q13794 54 aa11.99□□□□□ -0.49
SFSWAP-207ENST00000538548 ST20-AS1Q8NBB2 130 aa11.99□□□□□ -0.49
SFSWAP-207ENST00000538548 NDUFB1O75438 58 aa11.99□□□□□ -0.49
SFSWAP-207ENST00000538548 H3BNG1 76 aa11.98□□□□□ -0.49
SFSWAP-207ENST00000538548 SPRR1AP35321 89 aa11.98□□□□□ -0.49
SFSWAP-207ENST00000538548 PLA2G2DQ9UNK4 145 aa11.98□□□□□ -0.49
SFSWAP-207ENST00000538548 RPL37AP8A6NKH3 93 aa11.96□□□□□ -0.49
SFSWAP-207ENST00000538548 PSCAO43653 123 aa11.96□□□□□ -0.49
SFSWAP-207ENST00000538548 IGLV1-50A0A075B6I6 118 aa11.96□□□□□ -0.5
SFSWAP-207ENST00000538548 IGKV2D-24A0A075B6R9 120 aa11.96□□□□□ -0.5
SFSWAP-207ENST00000538548 PRR4Q16378 134 aa11.95□□□□□ -0.5
SFSWAP-207ENST00000538548 TLX1NBP0CAT3 122 aa11.94□□□□□ -0.5
SFSWAP-207ENST00000538548 NBEAL1Q6ZS30 2694 aa11.94□□□□□ -0.5
SFSWAP-207ENST00000538548 IGLV5-37A0A075B6J1 123 aa11.92□□□□□ -0.5
SFSWAP-207ENST00000538548 MP68P56378 58 aa11.9□□□□□ -0.5
SFSWAP-207ENST00000538548 LINC01556Q5JQF7 62 aa11.9□□□□□ -0.5
SFSWAP-207ENST00000538548 FAM168BA1KXE4 195 aa11.89□□□□□ -0.51
SFSWAP-207ENST00000538548 A8MUN3 132 aa11.88□□□□□ -0.51
SFSWAP-207ENST00000538548 LINC00476Q8WZB0 136 aa11.88□□□□□ -0.51
SFSWAP-207ENST00000538548 MGAM2Q2M2H8 2515 aa11.87□□□□□ -0.51
SFSWAP-207ENST00000538548 B9D2Q9BPU9 175 aa11.87□□□□□ -0.51
SFSWAP-207ENST00000538548 UBE2BP63146 152 aa11.86□□□□□ -0.51
SFSWAP-207ENST00000538548 KRTAP24-1Q3LI83 254 aa11.86□□□□□ -0.51
SFSWAP-207ENST00000538548 WFDC13Q8IUB5 93 aa11.85□□□□□ -0.51
SFSWAP-207ENST00000538548 CMYA5Q8N3K9 4069 aa11.84□□□□□ -0.51
SFSWAP-207ENST00000538548 TENM3Q9P273 2699 aa11.84□□□□□ -0.51
SFSWAP-207ENST00000538548 KRTAP7-1Q8IUC3 87 aa11.84□□□□□ -0.51
SFSWAP-207ENST00000538548 Q5VV11 94 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 196 ms