RNA–Protein interactions for RNA: ENST00000538502.5

SORT1-209, Transcript of sortilin 1, humanhuman

TSL 2 BASIC

Gene SORT1, Length 6,993 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-209ENST00000538502 LINC00304Q8N9R0 145 aa4.47□□□□□ -1.69
SORT1-209ENST00000538502 NOTCH2Q04721 2471 aa4.46□□□□□ -1.69
SORT1-209ENST00000538502 Q8N9P0 234 aaPredicted RBP4.46□□□□□ -1.7
SORT1-209ENST00000538502 FP248Q71RG6 208 aaPredicted RBP4.46□□□□□ -1.7
SORT1-209ENST00000538502 DMAC1Q96GE9 116 aa4.46□□□□□ -1.7
SORT1-209ENST00000538502 C9orf163Q8N9P6 203 aa4.45□□□□□ -1.7
SORT1-209ENST00000538502 C19orf73Q9NVV2 129 aa4.45□□□□□ -1.7
SORT1-209ENST00000538502 H3BS24 57 aa4.44□□□□□ -1.7
SORT1-209ENST00000538502 IGLV7-43P04211 117 aa4.44□□□□□ -1.7
SORT1-209ENST00000538502 GIG44P09565 113 aaPredicted RBP4.44□□□□□ -1.7
SORT1-209ENST00000538502 NAV2Q8IVL1 2488 aa4.44□□□□□ -1.7
SORT1-209ENST00000538502 Q5VV11 94 aa4.43□□□□□ -1.7
SORT1-209ENST00000538502 FAM229BQ4G0N7 80 aa4.43□□□□□ -1.7
SORT1-209ENST00000538502 A0A1B0GU33 70 aa4.43□□□□□ -1.7
SORT1-209ENST00000538502 MYO18BQ8IUG5 2567 aa4.42□□□□□ -1.7
SORT1-209ENST00000538502 LINC00483Q53H64 154 aa4.41□□□□□ -1.7
SORT1-209ENST00000538502 DOPEY1Q5JWR5 2465 aa4.41□□□□□ -1.7
SORT1-209ENST00000538502 A0A0A0MQY5 61 aa4.4□□□□□ -1.71
SORT1-209ENST00000538502 TTC28Q96AY4 2481 aa4.4□□□□□ -1.71
SORT1-209ENST00000538502 A0A1W2PNN7 141 aa4.4□□□□□ -1.71
SORT1-209ENST00000538502 ZNF575Q86XF7 245 aa4.4□□□□□ -1.71
SORT1-209ENST00000538502 A0A087WTM6 91 aa4.39□□□□□ -1.71
SORT1-209ENST00000538502 PRR26Q8N8Z3 221 aa4.39□□□□□ -1.71
SORT1-209ENST00000538502 CCDC168Q8NDH2 2452 aa4.39□□□□□ -1.71
SORT1-209ENST00000538502 HRES1P13985 223 aa4.39□□□□□ -1.71
SORT1-209ENST00000538502 A0A096LNT2 108 aa4.39□□□□□ -1.71
SORT1-209ENST00000538502 MMP24-AS1A0A0U1RRL7 71 aa4.38□□□□□ -1.71
SORT1-209ENST00000538502 PSORS1C2Q9UIG4 136 aa4.38□□□□□ -1.71
SORT1-209ENST00000538502 A0A0G2JQZ4 141 aa4.38□□□□□ -1.71
SORT1-209ENST00000538502 Q8N1X5 172 aa4.37□□□□□ -1.71
SORT1-209ENST00000538502 LRRK2Q5S007 2527 aa4.37□□□□□ -1.71
SORT1-209ENST00000538502 A0A0D9SG42 100 aa4.37□□□□□ -1.71
SORT1-209ENST00000538502 KRTAP24-1Q3LI83 254 aa4.37□□□□□ -1.71
SORT1-209ENST00000538502 WWC2-AS2Q96NR7 200 aa4.36□□□□□ -1.71
SORT1-209ENST00000538502 CYSTM1Q9H1C7 97 aa4.36□□□□□ -1.71
SORT1-209ENST00000538502 C9orf92A6NGG3 77 aa4.36□□□□□ -1.71
SORT1-209ENST00000538502 MYO9AB2RTY4 2548 aa4.35□□□□□ -1.71
SORT1-209ENST00000538502 SPRR1AP35321 89 aa4.35□□□□□ -1.71
SORT1-209ENST00000538502 SPRR1BP22528 89 aa4.34□□□□□ -1.71
SORT1-209ENST00000538502 KRTAP10-11P60412 298 aa4.34□□□□□ -1.71
SORT1-209ENST00000538502 CSAG1Q6PB30 78 aa4.34□□□□□ -1.71
SORT1-209ENST00000538502 PIEZO2Q9H5I5 2752 aa4.34□□□□□ -1.71
SORT1-209ENST00000538502 FN1P02751 2386 aaKnown RBP4.33□□□□□ -1.72
SORT1-209ENST00000538502 TNP2Q05952 138 aa4.33□□□□□ -1.72
SORT1-209ENST00000538502 COX6B2Q6YFQ2 88 aa4.33□□□□□ -1.72
SORT1-209ENST00000538502 OXTP01178 125 aa4.32□□□□□ -1.72
SORT1-209ENST00000538502 PRAC1Q96KF2 57 aa4.32□□□□□ -1.72
SORT1-209ENST00000538502 SPINK7P58062 85 aa4.32□□□□□ -1.72
SORT1-209ENST00000538502 ZCCHC13Q8WW36 166 aaKnown RBP4.32□□□□□ -1.72
SORT1-209ENST00000538502 UTRNP46939 3433 aa4.31□□□□□ -1.72
SORT1-209ENST00000538502 LINC00472Q9H8W2 130 aa4.31□□□□□ -1.72
SORT1-209ENST00000538502 J3QL48 77 aa4.3□□□□□ -1.72
SORT1-209ENST00000538502 K7EIL1 84 aa4.3□□□□□ -1.72
SORT1-209ENST00000538502 ROMO1P60602 79 aa4.3□□□□□ -1.72
SORT1-209ENST00000538502 ANAPC11Q9NYG5 84 aa4.3□□□□□ -1.72
SORT1-209ENST00000538502 Q5W150 140 aa4.29□□□□□ -1.72
SORT1-209ENST00000538502 BPTFQ12830 3046 aa4.29□□□□□ -1.72
SORT1-209ENST00000538502 CASC10Q5T4H9 136 aa4.28□□□□□ -1.72
SORT1-209ENST00000538502 KRTAP10-3P60369 221 aa4.28□□□□□ -1.72
SORT1-209ENST00000538502 ZFYVE26Q68DK2 2539 aa4.28□□□□□ -1.72
SORT1-209ENST00000538502 IGF2RP11717 2491 aa4.28□□□□□ -1.72
SORT1-209ENST00000538502 ABCA12Q86UK0 2595 aa4.28□□□□□ -1.72
SORT1-209ENST00000538502 Q6ZR54 194 aa4.28□□□□□ -1.72
SORT1-209ENST00000538502 S4R3F8 94 aa4.27□□□□□ -1.73
SORT1-209ENST00000538502 A0A087X002 238 aa4.26□□□□□ -1.73
SORT1-209ENST00000538502 RPL37P61927 97 aaKnown RBP4.25□□□□□ -1.73
SORT1-209ENST00000538502 CAMK2N1Q7Z7J9 78 aa4.25□□□□□ -1.73
SORT1-209ENST00000538502 PLAC8Q9NZF1 115 aa4.25□□□□□ -1.73
SORT1-209ENST00000538502 TLN1Q9Y490 2541 aaKnown RBP4.25□□□□□ -1.73
SORT1-209ENST00000538502 H1FX-AS1Q4G0G2 97 aa4.24□□□□□ -1.73
SORT1-209ENST00000538502 JMJD1CQ15652 2540 aa4.23□□□□□ -1.73
SORT1-209ENST00000538502 SPATA8Q6RVD6 105 aa4.23□□□□□ -1.73
SORT1-209ENST00000538502 KRTAP26-1Q6PEX3 210 aa4.23□□□□□ -1.73
SORT1-209ENST00000538502 NCOR2Q9Y618 2525 aa4.23□□□□□ -1.73
SORT1-209ENST00000538502 Q6ZSA8 131 aa4.23□□□□□ -1.73
SORT1-209ENST00000538502 Q8NDZ9 215 aa4.23□□□□□ -1.73
SORT1-209ENST00000538502 F8P00451 2351 aa4.23□□□□□ -1.73
SORT1-209ENST00000538502 A6NN06 94 aa4.22□□□□□ -1.73
SORT1-209ENST00000538502 TLN2Q9Y4G6 2542 aa4.22□□□□□ -1.73
SORT1-209ENST00000538502 USP9XQ93008 2570 aaPredicted RBP4.22□□□□□ -1.73
SORT1-209ENST00000538502 KRTAP29-1A8MX34 341 aaPredicted RBP4.2□□□□□ -1.74
SORT1-209ENST00000538502 PIEZO1Q92508 2521 aa4.2□□□□□ -1.74
SORT1-209ENST00000538502 KRTAP16-1A8MUX0 517 aa4.2□□□□□ -1.74
SORT1-209ENST00000538502 LCE6AA0A183 80 aa4.2□□□□□ -1.74
SORT1-209ENST00000538502 WDR87Q6ZQQ6 2873 aa4.2□□□□□ -1.74
SORT1-209ENST00000538502 PCNTO95613 3336 aa4.19□□□□□ -1.74
SORT1-209ENST00000538502 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP4.19□□□□□ -1.74
SORT1-209ENST00000538502 CR1P17927 2039 aa4.19□□□□□ -1.74
SORT1-209ENST00000538502 PKD1L2Q7Z442 2459 aa4.19□□□□□ -1.74
SORT1-209ENST00000538502 ANKRD17O75179 2603 aaKnown RBP4.19□□□□□ -1.74
SORT1-209ENST00000538502 SMR3BP02814 79 aaPredicted RBP4.18□□□□□ -1.74
SORT1-209ENST00000538502 KRTAP1-3Q8IUG1 177 aa4.17□□□□□ -1.74
SORT1-209ENST00000538502 KRTAP25-1Q3LHN0 102 aa4.17□□□□□ -1.74
SORT1-209ENST00000538502 ZNF462Q96JM2 2506 aa4.16□□□□□ -1.74
SORT1-209ENST00000538502 SETD2Q9BYW2 2564 aaPredicted RBP4.15□□□□□ -1.75
SORT1-209ENST00000538502 KRTAP4-16G5E9R7 235 aaPredicted RBP4.14□□□□□ -1.75
SORT1-209ENST00000538502 KRTAP1-1Q07627 177 aa4.14□□□□□ -1.75
SORT1-209ENST00000538502 CENPFP49454 3210 aa4.14□□□□□ -1.75
SORT1-209ENST00000538502 R4GN34 69 aa4.14□□□□□ -1.75
SORT1-209ENST00000538502 ACANP16112 2415 aa4.14□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 86.4 ms