RNA–Protein interactions for RNA: ENST00000538291.5

SCARB1-205, Transcript of scavenger receptor class B member 1, humanhuman

TSL 5

Gene SCARB1, Length 5,527 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-205ENST00000538291 SMR3BP02814 79 aaPredicted RBP11.06□□□□□ -0.64
SCARB1-205ENST00000538291 LINC00336Q6ZUF6 198 aa11.05□□□□□ -0.64
SCARB1-205ENST00000538291 KRTAP10-3P60369 221 aa11.05□□□□□ -0.64
SCARB1-205ENST00000538291 OBSCN-AS1Q96MR7 158 aa11.04□□□□□ -0.64
SCARB1-205ENST00000538291 CENPFP49454 3210 aa11.04□□□□□ -0.64
SCARB1-205ENST00000538291 C9orf92A6NGG3 77 aa11.03□□□□□ -0.64
SCARB1-205ENST00000538291 PRR15Q8IV56 129 aa11.03□□□□□ -0.64
SCARB1-205ENST00000538291 GIG44P09565 113 aaPredicted RBP11.03□□□□□ -0.64
SCARB1-205ENST00000538291 C9orf129Q5T035 196 aaKnown RBP11.03□□□□□ -0.64
SCARB1-205ENST00000538291 LINC00612Q8N6U2 182 aa11.03□□□□□ -0.64
SCARB1-205ENST00000538291 A0A1B0GVX0 72 aa11.02□□□□□ -0.64
SCARB1-205ENST00000538291 SRCAPQ6ZRS2 3230 aa11.02□□□□□ -0.64
SCARB1-205ENST00000538291 ERC2-IT1O76042 136 aa11.02□□□□□ -0.65
SCARB1-205ENST00000538291 TLX1NBP0CAT3 122 aa11.02□□□□□ -0.65
SCARB1-205ENST00000538291 COA5Q86WW8 74 aa11.01□□□□□ -0.65
SCARB1-205ENST00000538291 MGAM2Q2M2H8 2515 aa11.01□□□□□ -0.65
SCARB1-205ENST00000538291 PLA2G2DQ9UNK4 145 aa11□□□□□ -0.65
SCARB1-205ENST00000538291 IGLV7-43P04211 117 aa10.99□□□□□ -0.65
SCARB1-205ENST00000538291 C4orf26Q17RF5 130 aa10.98□□□□□ -0.65
SCARB1-205ENST00000538291 Q8N377 158 aa10.98□□□□□ -0.65
SCARB1-205ENST00000538291 USP24Q9UPU5 2620 aa10.98□□□□□ -0.65
SCARB1-205ENST00000538291 EP400Q96L91 3159 aa10.98□□□□□ -0.65
SCARB1-205ENST00000538291 UQCR11O14957 56 aa10.97□□□□□ -0.65
SCARB1-205ENST00000538291 SPINT4Q6UDR6 99 aa10.97□□□□□ -0.65
SCARB1-205ENST00000538291 PCSK5Q92824 1860 aa10.96□□□□□ -0.65
SCARB1-205ENST00000538291 APLNQ9ULZ1 77 aa10.96□□□□□ -0.66
SCARB1-205ENST00000538291 HECTD1Q9ULT8 2610 aa10.95□□□□□ -0.66
SCARB1-205ENST00000538291 IGLV5-37A0A075B6J1 123 aa10.94□□□□□ -0.66
SCARB1-205ENST00000538291 PSORS1C2Q9UIG4 136 aa10.94□□□□□ -0.66
SCARB1-205ENST00000538291 ANAPC11Q9NYG5 84 aa10.93□□□□□ -0.66
SCARB1-205ENST00000538291 RBM12B-AS1Q9P1G2 102 aa10.93□□□□□ -0.66
SCARB1-205ENST00000538291 EIF4EBP3O60516 100 aaPredicted RBP10.93□□□□□ -0.66
SCARB1-205ENST00000538291 ZNF575Q86XF7 245 aa10.93□□□□□ -0.66
SCARB1-205ENST00000538291 CNBPP62633 177 aaKnown RBP10.91□□□□□ -0.66
SCARB1-205ENST00000538291 A0A1W2PNN7 141 aa10.91□□□□□ -0.66
SCARB1-205ENST00000538291 CYP4F30PQ9H0H9 118 aa10.91□□□□□ -0.66
SCARB1-205ENST00000538291 SPRR4Q96PI1 79 aa10.9□□□□□ -0.66
SCARB1-205ENST00000538291 A0A0G2JQZ4 141 aa10.9□□□□□ -0.67
SCARB1-205ENST00000538291 A8MUN3 132 aa10.89□□□□□ -0.67
SCARB1-205ENST00000538291 CRIPTQ9P021 101 aa10.88□□□□□ -0.67
SCARB1-205ENST00000538291 CASC10Q5T4H9 136 aa10.86□□□□□ -0.67
SCARB1-205ENST00000538291 KRTAP1-3Q8IUG1 177 aa10.85□□□□□ -0.67
SCARB1-205ENST00000538291 MIR22HGQ0VDD5 57 aa10.84□□□□□ -0.67
SCARB1-205ENST00000538291 KRTAP1-1Q07627 177 aa10.8□□□□□ -0.68
SCARB1-205ENST00000538291 KLKP1Q107X0 134 aa10.79□□□□□ -0.68
SCARB1-205ENST00000538291 A0A1W2PNM2 257 aa10.76□□□□□ -0.69
SCARB1-205ENST00000538291 LINC01554Q52M75 96 aa10.76□□□□□ -0.69
SCARB1-205ENST00000538291 ATRQ13535 2644 aa10.74□□□□□ -0.69
SCARB1-205ENST00000538291 MAST4O15021 2626 aa10.73□□□□□ -0.69
SCARB1-205ENST00000538291 TNP2Q05952 138 aa10.73□□□□□ -0.69
SCARB1-205ENST00000538291 IGLV5-48A0A075B6I7 105 aa10.72□□□□□ -0.69
SCARB1-205ENST00000538291 FAM104AQ969W3 186 aa10.72□□□□□ -0.69
SCARB1-205ENST00000538291 Q8N1X5 172 aa10.71□□□□□ -0.69
SCARB1-205ENST00000538291 Q6ZSA8 131 aa10.7□□□□□ -0.7
SCARB1-205ENST00000538291 CD164Q04900 197 aa10.67□□□□□ -0.7
SCARB1-205ENST00000538291 A0A0D9SG42 100 aa10.66□□□□□ -0.7
SCARB1-205ENST00000538291 IGLV7-46A0A075B6I9 117 aa10.65□□□□□ -0.7
SCARB1-205ENST00000538291 SPANXA2-OT1Q8N9U9 137 aa10.64□□□□□ -0.71
SCARB1-205ENST00000538291 H7BZZ5 65 aa10.64□□□□□ -0.71
SCARB1-205ENST00000538291 CDC42SE1Q9NRR8 79 aa10.63□□□□□ -0.71
SCARB1-205ENST00000538291 PRR26Q8N8Z3 221 aa10.6□□□□□ -0.71
SCARB1-205ENST00000538291 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.59□□□□□ -0.71
SCARB1-205ENST00000538291 FLNAP21333 2647 aaKnown RBP10.56□□□□□ -0.72
SCARB1-205ENST00000538291 FAM229BQ4G0N7 80 aa10.55□□□□□ -0.72
SCARB1-205ENST00000538291 M0R2T5 61 aa10.54□□□□□ -0.72
SCARB1-205ENST00000538291 HELZ2Q9BYK8 2649 aaKnown RBP10.54□□□□□ -0.72
SCARB1-205ENST00000538291 WIPF1O43516 503 aa10.52□□□□□ -0.73
SCARB1-205ENST00000538291 BPTFQ12830 3046 aa10.52□□□□□ -0.73
SCARB1-205ENST00000538291 ITPR3Q14573 2671 aa10.5□□□□□ -0.73
SCARB1-205ENST00000538291 CAMK2N1Q7Z7J9 78 aa10.5□□□□□ -0.73
SCARB1-205ENST00000538291 PRRC2CQ9Y520 2896 aaKnown RBP10.49□□□□□ -0.73
SCARB1-205ENST00000538291 PLAC8Q9NZF1 115 aa10.47□□□□□ -0.73
SCARB1-205ENST00000538291 STAB1Q9NY15 2570 aa10.45□□□□□ -0.74
SCARB1-205ENST00000538291 CR1P17927 2039 aa10.45□□□□□ -0.74
SCARB1-205ENST00000538291 OCR1Q9BZK8 76 aa10.44□□□□□ -0.74
SCARB1-205ENST00000538291 KTN1-AS1Q86SY8 53 aa10.42□□□□□ -0.74
SCARB1-205ENST00000538291 HRES1P13985 223 aa10.41□□□□□ -0.74
SCARB1-205ENST00000538291 LCA10Q71F78 164 aa10.41□□□□□ -0.74
SCARB1-205ENST00000538291 A0A1B0GU33 70 aa10.4□□□□□ -0.75
SCARB1-205ENST00000538291 ZCCHC13Q8WW36 166 aaKnown RBP10.39□□□□□ -0.75
SCARB1-205ENST00000538291 LUZP6Q538Z0 58 aa10.39□□□□□ -0.75
SCARB1-205ENST00000538291 CSAG1Q6PB30 78 aa10.38□□□□□ -0.75
SCARB1-205ENST00000538291 Q1T7F1 81 aa10.37□□□□□ -0.75
SCARB1-205ENST00000538291 CFAP46Q8IYW2 2715 aa10.32□□□□□ -0.76
SCARB1-205ENST00000538291 SPRR1AP35321 89 aa10.32□□□□□ -0.76
SCARB1-205ENST00000538291 LINC00483Q53H64 154 aa10.32□□□□□ -0.76
SCARB1-205ENST00000538291 MMP24-AS1A0A0U1RRL7 71 aa10.32□□□□□ -0.76
SCARB1-205ENST00000538291 S4R3F8 94 aa10.3□□□□□ -0.76
SCARB1-205ENST00000538291 SEC61BP60468 96 aaKnown RBP10.28□□□□□ -0.76
SCARB1-205ENST00000538291 Q8N9P0 234 aaPredicted RBP10.27□□□□□ -0.77
SCARB1-205ENST00000538291 SPRR1BP22528 89 aa10.26□□□□□ -0.77
SCARB1-205ENST00000538291 Q5VSD8 79 aa10.25□□□□□ -0.77
SCARB1-205ENST00000538291 LCE6AA0A183 80 aa10.23□□□□□ -0.77
SCARB1-205ENST00000538291 DMAC1Q96GE9 116 aa10.22□□□□□ -0.77
SCARB1-205ENST00000538291 SPINK7P58062 85 aa10.22□□□□□ -0.77
SCARB1-205ENST00000538291 Q8NDZ9 215 aa10.21□□□□□ -0.77
SCARB1-205ENST00000538291 Q5W150 140 aa10.2□□□□□ -0.78
SCARB1-205ENST00000538291 KRTAP1-5Q9BYS1 174 aa10.19□□□□□ -0.78
SCARB1-205ENST00000538291 SETXQ7Z333 2677 aaKnown RBP10.18□□□□□ -0.78
SCARB1-205ENST00000538291 LINC00472Q9H8W2 130 aa10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms