RNA–Protein interactions for RNA: ENST00000538239.5

LRP6-203, Transcript of LDL receptor related protein 6, humanhuman

TSL 1 (best)

Gene LRP6, Length 7,812 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP6-203ENST00000538239 LITAFQ99732 161 aa3.5□□□□□ -1.85
LRP6-203ENST00000538239 KCNQ1DNQ9H478 68 aa3.5□□□□□ -1.85
LRP6-203ENST00000538239 A0A0G2JQZ4 141 aa3.5□□□□□ -1.85
LRP6-203ENST00000538239 PSORS1C2Q9UIG4 136 aa3.5□□□□□ -1.85
LRP6-203ENST00000538239 PSPHP1O15172 72 aa3.49□□□□□ -1.85
LRP6-203ENST00000538239 OBSCN-AS1Q96MR7 158 aa3.49□□□□□ -1.85
LRP6-203ENST00000538239 LOC110117498A0A087WWA1 95 aa3.49□□□□□ -1.85
LRP6-203ENST00000538239 ACYP2P14621 99 aa3.48□□□□□ -1.85
LRP6-203ENST00000538239 IGFL1Q6UW32 110 aa3.48□□□□□ -1.85
LRP6-203ENST00000538239 SPAG11AQ6PDA7 123 aa3.48□□□□□ -1.85
LRP6-203ENST00000538239 EPG5Q9HCE0 2579 aa3.48□□□□□ -1.85
LRP6-203ENST00000538239 TRBV7-4A0A0J9YYF1 115 aa3.48□□□□□ -1.85
LRP6-203ENST00000538239 SMCPP49901 116 aaPredicted RBP3.48□□□□□ -1.85
LRP6-203ENST00000538239 C8orf87E5RJ46 101 aa3.47□□□□□ -1.85
LRP6-203ENST00000538239 A8MWP4 228 aa3.47□□□□□ -1.85
LRP6-203ENST00000538239 TLX1NBP0CAT3 122 aa3.47□□□□□ -1.85
LRP6-203ENST00000538239 HECTD1Q9ULT8 2610 aa3.47□□□□□ -1.85
LRP6-203ENST00000538239 SMIM26A0A096LP01 95 aa3.47□□□□□ -1.85
LRP6-203ENST00000538239 A0A1B0GW54 56 aa3.47□□□□□ -1.85
LRP6-203ENST00000538239 K7EQZ3 153 aa3.46□□□□□ -1.85
LRP6-203ENST00000538239 BRCA2P51587 3418 aa3.46□□□□□ -1.86
LRP6-203ENST00000538239 A0A1B0GU69 56 aa3.46□□□□□ -1.86
LRP6-203ENST00000538239 CNBPP62633 177 aaKnown RBP3.46□□□□□ -1.86
LRP6-203ENST00000538239 MRPL34Q9BQ48 92 aaKnown RBP3.46□□□□□ -1.86
LRP6-203ENST00000538239 EIF4EBP3O60516 100 aaPredicted RBP3.46□□□□□ -1.86
LRP6-203ENST00000538239 TRAV22A0A0B4J277 110 aa3.46□□□□□ -1.86
LRP6-203ENST00000538239 SSBP3-AS1Q7Z2R9 100 aa3.46□□□□□ -1.86
LRP6-203ENST00000538239 PLA2G2DQ9UNK4 145 aa3.45□□□□□ -1.86
LRP6-203ENST00000538239 LAMA3Q16787 3333 aa3.45□□□□□ -1.86
LRP6-203ENST00000538239 IGLV8-61A0A075B6I0 122 aa3.45□□□□□ -1.86
LRP6-203ENST00000538239 Q8N377 158 aa3.45□□□□□ -1.86
LRP6-203ENST00000538239 CHD9Q3L8U1 2897 aa3.44□□□□□ -1.86
LRP6-203ENST00000538239 ERC2-IT1O76042 136 aa3.44□□□□□ -1.86
LRP6-203ENST00000538239 SPRR4Q96PI1 79 aa3.44□□□□□ -1.86
LRP6-203ENST00000538239 C8orf17Q9NRJ1 99 aa3.43□□□□□ -1.86
LRP6-203ENST00000538239 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP3.43□□□□□ -1.86
LRP6-203ENST00000538239 PRO0461Q9UI25 63 aa3.43□□□□□ -1.86
LRP6-203ENST00000538239 RANBP2P49792 3224 aaKnown RBP3.43□□□□□ -1.86
LRP6-203ENST00000538239 A0A1B0GVX0 72 aa3.42□□□□□ -1.86
LRP6-203ENST00000538239 IGLV5-37A0A075B6J1 123 aa3.42□□□□□ -1.86
LRP6-203ENST00000538239 LOC101927531A0A1B0GV80 90 aa3.42□□□□□ -1.86
LRP6-203ENST00000538239 PRR26Q8N8Z3 221 aa3.41□□□□□ -1.86
LRP6-203ENST00000538239 RBM12B-AS1Q9P1G2 102 aa3.41□□□□□ -1.86
LRP6-203ENST00000538239 H3BPC8 53 aa3.41□□□□□ -1.86
LRP6-203ENST00000538239 PMAIP1Q13794 54 aa3.41□□□□□ -1.86
LRP6-203ENST00000538239 WIPF1O43516 503 aa3.4□□□□□ -1.86
LRP6-203ENST00000538239 PRR15Q8IV56 129 aa3.4□□□□□ -1.87
LRP6-203ENST00000538239 BPTFQ12830 3046 aa3.4□□□□□ -1.87
LRP6-203ENST00000538239 PRRC2CQ9Y520 2896 aaKnown RBP3.39□□□□□ -1.87
LRP6-203ENST00000538239 CDH23Q9H251 3354 aa3.39□□□□□ -1.87
LRP6-203ENST00000538239 PRUNE2Q8WUY3 3088 aa3.39□□□□□ -1.87
LRP6-203ENST00000538239 IGLV7-46A0A075B6I9 117 aa3.39□□□□□ -1.87
LRP6-203ENST00000538239 FLNBO75369 2602 aaKnown RBP3.38□□□□□ -1.87
LRP6-203ENST00000538239 C1orf195Q5TG92 126 aa3.38□□□□□ -1.87
LRP6-203ENST00000538239 FLNAP21333 2647 aaKnown RBP3.38□□□□□ -1.87
LRP6-203ENST00000538239 Q6ZSA8 131 aa3.37□□□□□ -1.87
LRP6-203ENST00000538239 ITPR3Q14573 2671 aa3.37□□□□□ -1.87
LRP6-203ENST00000538239 LCE6AA0A183 80 aa3.37□□□□□ -1.87
LRP6-203ENST00000538239 HELZ2Q9BYK8 2649 aaKnown RBP3.37□□□□□ -1.87
LRP6-203ENST00000538239 Q5VSD8 79 aa3.36□□□□□ -1.87
LRP6-203ENST00000538239 M0R2T5 61 aa3.36□□□□□ -1.87
LRP6-203ENST00000538239 TRANK1O15050 2925 aa3.36□□□□□ -1.87
LRP6-203ENST00000538239 XIRP2A4UGR9 3374 aa3.36□□□□□ -1.87
LRP6-203ENST00000538239 Q8N1X5 172 aa3.36□□□□□ -1.87
LRP6-203ENST00000538239 COA5Q86WW8 74 aa3.35□□□□□ -1.87
LRP6-203ENST00000538239 A0A1W2PNM2 257 aa3.35□□□□□ -1.87
LRP6-203ENST00000538239 LINC01554Q52M75 96 aa3.35□□□□□ -1.87
LRP6-203ENST00000538239 PLAC8Q9NZF1 115 aa3.35□□□□□ -1.87
LRP6-203ENST00000538239 KRTAP1-5Q9BYS1 174 aa3.34□□□□□ -1.87
LRP6-203ENST00000538239 IGLV5-48A0A075B6I7 105 aa3.34□□□□□ -1.87
LRP6-203ENST00000538239 LINC01600Q96MT4 127 aa3.34□□□□□ -1.87
LRP6-203ENST00000538239 CFAP46Q8IYW2 2715 aa3.33□□□□□ -1.88
LRP6-203ENST00000538239 UNC80Q8N2C7 3258 aa3.33□□□□□ -1.88
LRP6-203ENST00000538239 KRTAP10-2P60368 255 aa3.33□□□□□ -1.88
LRP6-203ENST00000538239 MGAQ8IWI9 3026 aa3.33□□□□□ -1.88
LRP6-203ENST00000538239 KRTAP10-1P60331 282 aa3.33□□□□□ -1.88
LRP6-203ENST00000538239 MGAM2Q2M2H8 2515 aa3.32□□□□□ -1.88
LRP6-203ENST00000538239 CD164Q04900 197 aa3.32□□□□□ -1.88
LRP6-203ENST00000538239 FAM104AQ969W3 186 aa3.32□□□□□ -1.88
LRP6-203ENST00000538239 AKAP13Q12802 2813 aa3.31□□□□□ -1.88
LRP6-203ENST00000538239 A0A0D9SG42 100 aa3.31□□□□□ -1.88
LRP6-203ENST00000538239 FAM229BQ4G0N7 80 aa3.31□□□□□ -1.88
LRP6-203ENST00000538239 USP24Q9UPU5 2620 aa3.31□□□□□ -1.88
LRP6-203ENST00000538239 SZT2Q5T011 3432 aa3.31□□□□□ -1.88
LRP6-203ENST00000538239 C4orf26Q17RF5 130 aa3.3□□□□□ -1.88
LRP6-203ENST00000538239 CFAP54Q96N23 3096 aa3.29□□□□□ -1.88
LRP6-203ENST00000538239 SPINT4Q6UDR6 99 aa3.28□□□□□ -1.88
LRP6-203ENST00000538239 LAMA2P24043 3122 aaKnown RBP3.28□□□□□ -1.88
LRP6-203ENST00000538239 Q8NDZ9 215 aa3.28□□□□□ -1.88
LRP6-203ENST00000538239 WDFY4Q6ZS81 3184 aa3.28□□□□□ -1.88
LRP6-203ENST00000538239 TRIOO75962 3097 aa3.28□□□□□ -1.88
LRP6-203ENST00000538239 A8MUN3 132 aa3.27□□□□□ -1.89
LRP6-203ENST00000538239 UQCR11O14957 56 aa3.27□□□□□ -1.89
LRP6-203ENST00000538239 ATRQ13535 2644 aa3.27□□□□□ -1.89
LRP6-203ENST00000538239 DNAH14Q0VDD8 3507 aa3.27□□□□□ -1.89
LRP6-203ENST00000538239 MIR22HGQ0VDD5 57 aa3.26□□□□□ -1.89
LRP6-203ENST00000538239 CELSR3Q9NYQ7 3312 aa3.26□□□□□ -1.89
LRP6-203ENST00000538239 MAST4O15021 2626 aa3.26□□□□□ -1.89
LRP6-203ENST00000538239 KRTAP26-1Q6PEX3 210 aa3.25□□□□□ -1.89
LRP6-203ENST00000538239 ZNF292O60281 2723 aa3.25□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 176.3 ms