RNA–Protein interactions for RNA: ENST00000538136.1

MSH6-209, Transcript of mutS homolog 6, humanhuman

TSL 2 BASIC

Gene MSH6, Length 4,055 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-209ENST00000538136 hADV29S1A0JD25 119 aa4.59□□□□□ -1.67
MSH6-209ENST00000538136 IFITM1P13164 125 aa4.58□□□□□ -1.68
MSH6-209ENST00000538136 TYMSOSQ8TAI1 123 aa4.58□□□□□ -1.68
MSH6-209ENST00000538136 DNAH9Q9NYC9 4486 aa4.58□□□□□ -1.68
MSH6-209ENST00000538136 ATXN8Q156A1 80 aa4.58□□□□□ -1.68
MSH6-209ENST00000538136 Q6ZRN7 208 aaPredicted RBP4.58□□□□□ -1.68
MSH6-209ENST00000538136 SIGMAR1Q99720 223 aa4.57□□□□□ -1.68
MSH6-209ENST00000538136 BAALC-AS2P0C853 105 aa4.57□□□□□ -1.68
MSH6-209ENST00000538136 NDUFS5O43920 106 aa4.56□□□□□ -1.68
MSH6-209ENST00000538136 SPANXDQ9BXN6 97 aa4.56□□□□□ -1.68
MSH6-209ENST00000538136 KMT2CQ8NEZ4 4911 aaKnown RBP4.56□□□□□ -1.68
MSH6-209ENST00000538136 H0Y9J4 135 aa4.56□□□□□ -1.68
MSH6-209ENST00000538136 TRIAP1O43715 76 aa4.56□□□□□ -1.68
MSH6-209ENST00000538136 GTF2H5Q6ZYL4 71 aa4.56□□□□□ -1.68
MSH6-209ENST00000538136 VPREB1P12018 145 aa4.55□□□□□ -1.68
MSH6-209ENST00000538136 UBE2V1Q13404 147 aa4.55□□□□□ -1.68
MSH6-209ENST00000538136 COX17Q14061 63 aa4.55□□□□□ -1.68
MSH6-209ENST00000538136 Q9BRP9 147 aa4.55□□□□□ -1.68
MSH6-209ENST00000538136 ETDBQ3ZM63 59 aa4.55□□□□□ -1.68
MSH6-209ENST00000538136 TRACP01848 142 aa4.55□□□□□ -1.68
MSH6-209ENST00000538136 CRYGAP11844 174 aa4.55□□□□□ -1.68
MSH6-209ENST00000538136 ERC2-IT1O76042 136 aa4.54□□□□□ -1.68
MSH6-209ENST00000538136 ANKRD29Q8N6D5 301 aa4.54□□□□□ -1.68
MSH6-209ENST00000538136 DSCR8Q96T75 97 aa4.54□□□□□ -1.68
MSH6-209ENST00000538136 KRTAP26-1Q6PEX3 210 aa4.54□□□□□ -1.68
MSH6-209ENST00000538136 C2orf91Q6ZV80 131 aa4.54□□□□□ -1.68
MSH6-209ENST00000538136 Q8NDZ9 215 aa4.54□□□□□ -1.68
MSH6-209ENST00000538136 ORMDL1Q9P0S3 153 aa4.54□□□□□ -1.68
MSH6-209ENST00000538136 IGLV5-45A0A087WSX0 123 aa4.54□□□□□ -1.68
MSH6-209ENST00000538136 CNBPP62633 177 aaKnown RBP4.54□□□□□ -1.68
MSH6-209ENST00000538136 C14orf132Q9NPU4 83 aa4.53□□□□□ -1.68
MSH6-209ENST00000538136 KIAA1109Q2LD37 5005 aa4.53□□□□□ -1.68
MSH6-209ENST00000538136 IGLV7-43P04211 117 aa4.52□□□□□ -1.69
MSH6-209ENST00000538136 CDIP1Q9H305 208 aa4.52□□□□□ -1.69
MSH6-209ENST00000538136 CCKP06307 115 aa4.51□□□□□ -1.69
MSH6-209ENST00000538136 PLECQ15149 4684 aaKnown RBP4.51□□□□□ -1.69
MSH6-209ENST00000538136 BCE1O60756 84 aa4.51□□□□□ -1.69
MSH6-209ENST00000538136 ZNF861PO60384 105 aa4.51□□□□□ -1.69
MSH6-209ENST00000538136 HIST1H4AP62805 103 aaKnown RBP4.51□□□□□ -1.69
MSH6-209ENST00000538136 KRTAP11-1Q8IUC1 163 aa4.51□□□□□ -1.69
MSH6-209ENST00000538136 C9orf92A6NGG3 77 aa4.51□□□□□ -1.69
MSH6-209ENST00000538136 K7ERU9 68 aa4.51□□□□□ -1.69
MSH6-209ENST00000538136 OCIAD2Q56VL3 154 aa4.5□□□□□ -1.69
MSH6-209ENST00000538136 A0A087WSZ3 146 aa4.5□□□□□ -1.69
MSH6-209ENST00000538136 LYSTQ99698 3801 aa4.5□□□□□ -1.69
MSH6-209ENST00000538136 STARD9Q9P2P6 4700 aa4.5□□□□□ -1.69
MSH6-209ENST00000538136 TCL1BO95988 128 aa4.5□□□□□ -1.69
MSH6-209ENST00000538136 H0YGX0 51 aa4.49□□□□□ -1.69
MSH6-209ENST00000538136 SCGB1A1P11684 91 aa4.49□□□□□ -1.69
MSH6-209ENST00000538136 IGLV1-50A0A075B6I6 118 aa4.49□□□□□ -1.69
MSH6-209ENST00000538136 GHRHP01286 108 aa4.48□□□□□ -1.69
MSH6-209ENST00000538136 RBM3P98179 157 aaKnown RBP4.48□□□□□ -1.69
MSH6-209ENST00000538136 Q6Q795 121 aa4.48□□□□□ -1.69
MSH6-209ENST00000538136 DHRS4-AS1Q9P1J3 65 aa4.48□□□□□ -1.69
MSH6-209ENST00000538136 ZNF706Q9Y5V0 76 aaPredicted RBP4.48□□□□□ -1.69
MSH6-209ENST00000538136 A0A1W2PPM0 123 aa4.47□□□□□ -1.69
MSH6-209ENST00000538136 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP4.47□□□□□ -1.69
MSH6-209ENST00000538136 FAM218AQ96MZ4 157 aa4.46□□□□□ -1.69
MSH6-209ENST00000538136 TEX49A0A1B0GTD5 131 aa4.46□□□□□ -1.7
MSH6-209ENST00000538136 LINC01546A6NGU7 62 aa4.46□□□□□ -1.7
MSH6-209ENST00000538136 C9orf118A6NHY6 69 aa4.46□□□□□ -1.7
MSH6-209ENST00000538136 PRYO14603 147 aa4.46□□□□□ -1.7
MSH6-209ENST00000538136 Q6ZRX8 168 aa4.46□□□□□ -1.7
MSH6-209ENST00000538136 HIGD1BQ9P298 99 aa4.46□□□□□ -1.7
MSH6-209ENST00000538136 TIMM17BO60830 172 aa4.46□□□□□ -1.7
MSH6-209ENST00000538136 Q8NBF4 154 aa4.46□□□□□ -1.7
MSH6-209ENST00000538136 NDUFV3P56181 108 aaKnown RBP4.46□□□□□ -1.7
MSH6-209ENST00000538136 LINC01561Q8N1V8 128 aa4.46□□□□□ -1.7
MSH6-209ENST00000538136 LITAFQ99732 161 aa4.46□□□□□ -1.7
MSH6-209ENST00000538136 DNAH1Q9P2D7 4330 aa4.46□□□□□ -1.7
MSH6-209ENST00000538136 NREPQ16612 68 aa4.45□□□□□ -1.7
MSH6-209ENST00000538136 TAX1BP3O14907 124 aa4.45□□□□□ -1.7
MSH6-209ENST00000538136 IGKV3D-7A0A0C4DH55 119 aa4.45□□□□□ -1.7
MSH6-209ENST00000538136 KRTAP4-5Q9BYR2 181 aa4.45□□□□□ -1.7
MSH6-209ENST00000538136 PLAC8Q9NZF1 115 aa4.45□□□□□ -1.7
MSH6-209ENST00000538136 LINC00304Q8N9R0 145 aa4.44□□□□□ -1.7
MSH6-209ENST00000538136 IGHV6-1A0A0B4J1U7 121 aa4.44□□□□□ -1.7
MSH6-209ENST00000538136 A0A0B4J2C4 111 aa4.44□□□□□ -1.7
MSH6-209ENST00000538136 TRBV10-2A0A0K0K1G8 114 aa4.44□□□□□ -1.7
MSH6-209ENST00000538136 FAT1Q14517 4588 aa4.44□□□□□ -1.7
MSH6-209ENST00000538136 RYR3Q15413 4870 aa4.44□□□□□ -1.7
MSH6-209ENST00000538136 KMT2AQ03164 3969 aa4.43□□□□□ -1.7
MSH6-209ENST00000538136 J3QR89 54 aa4.43□□□□□ -1.7
MSH6-209ENST00000538136 NDUFC2O95298 119 aa4.43□□□□□ -1.7
MSH6-209ENST00000538136 WFDC13Q8IUB5 93 aa4.43□□□□□ -1.7
MSH6-209ENST00000538136 LINC00575Q6W349 94 aa4.43□□□□□ -1.7
MSH6-209ENST00000538136 Q8N1X5 172 aa4.43□□□□□ -1.7
MSH6-209ENST00000538136 TMEM256-PLSCR3K7ERE1 68 aa4.42□□□□□ -1.7
MSH6-209ENST00000538136 F8WDY8 70 aa4.42□□□□□ -1.7
MSH6-209ENST00000538136 IGKV4-1P06312 121 aa4.42□□□□□ -1.7
MSH6-209ENST00000538136 A0A087X002 238 aa4.41□□□□□ -1.7
MSH6-209ENST00000538136 LST1O00453 97 aa4.41□□□□□ -1.7
MSH6-209ENST00000538136 TLX1NBP0CAT3 122 aa4.41□□□□□ -1.7
MSH6-209ENST00000538136 Q8N9L7 120 aa4.41□□□□□ -1.7
MSH6-209ENST00000538136 TRBV20-1A0A075B6N2 111 aa4.41□□□□□ -1.7
MSH6-209ENST00000538136 B5MCH6 92 aa4.4□□□□□ -1.7
MSH6-209ENST00000538136 IGLV6-57P01721 117 aa4.4□□□□□ -1.7
MSH6-209ENST00000538136 NDUFB1O75438 58 aa4.4□□□□□ -1.71
MSH6-209ENST00000538136 KRTAP7-1Q8IUC3 87 aa4.4□□□□□ -1.71
MSH6-209ENST00000538136 KCNQ1DNQ9H478 68 aa4.4□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 109.1 ms