RNA–Protein interactions for RNA: ENST00000537842.5

TNFRSF1A-210, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 3

Gene TNFRSF1A, Length 404 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-210ENST00000537842 SPANXA2-OT1Q8N9U9 137 aa1.6□□□□□ -2.15
TNFRSF1A-210ENST00000537842 CIRBP-AS1Q8TBR5 109 aa1.6□□□□□ -2.15
TNFRSF1A-210ENST00000537842 COPS9Q8WXC6 57 aa1.6□□□□□ -2.15
TNFRSF1A-210ENST00000537842 UBE2WQ96B02 151 aa1.6□□□□□ -2.15
TNFRSF1A-210ENST00000537842 LINC00526Q96FQ7 95 aa1.6□□□□□ -2.15
TNFRSF1A-210ENST00000537842 SPANXDQ9BXN6 97 aa1.6□□□□□ -2.15
TNFRSF1A-210ENST00000537842 DPH3P1Q9H4G8 78 aa1.6□□□□□ -2.15
TNFRSF1A-210ENST00000537842 IGHV1-24A0A0C4DH33 117 aa1.59□□□□□ -2.15
TNFRSF1A-210ENST00000537842 C7orf77A4D0Y5 90 aa1.59□□□□□ -2.15
TNFRSF1A-210ENST00000537842 C9JAW5 83 aa1.59□□□□□ -2.15
TNFRSF1A-210ENST00000537842 D6R8Y8 96 aa1.59□□□□□ -2.15
TNFRSF1A-210ENST00000537842 LEPROTO15243 131 aa1.59□□□□□ -2.15
TNFRSF1A-210ENST00000537842 DLEU1O43261 78 aa1.59□□□□□ -2.15
TNFRSF1A-210ENST00000537842 HIST1H2BKO60814 126 aa1.59□□□□□ -2.15
TNFRSF1A-210ENST00000537842 SMR3BP02814 79 aaPredicted RBP1.59□□□□□ -2.15
TNFRSF1A-210ENST00000537842 HIST1H2BJP06899 126 aa1.59□□□□□ -2.15
TNFRSF1A-210ENST00000537842 TRGC1P0CF51 173 aa1.59□□□□□ -2.15
TNFRSF1A-210ENST00000537842 SDIM1Q6ZPB5 146 aa1.59□□□□□ -2.15
TNFRSF1A-210ENST00000537842 TMEM136Q6ZRR5 245 aa1.59□□□□□ -2.15
TNFRSF1A-210ENST00000537842 Q6ZSA8 131 aa1.59□□□□□ -2.15
TNFRSF1A-210ENST00000537842 IMMP2LQ96T52 175 aa1.59□□□□□ -2.15
TNFRSF1A-210ENST00000537842 CDC42SE2Q9NRR3 84 aa1.59□□□□□ -2.15
TNFRSF1A-210ENST00000537842 TMEM242Q9NWH2 141 aa1.59□□□□□ -2.15
TNFRSF1A-210ENST00000537842 NAT8BQ9UHF3 227 aa1.59□□□□□ -2.15
TNFRSF1A-210ENST00000537842 TRBV25-1A0A075B6N4 114 aa1.58□□□□□ -2.16
TNFRSF1A-210ENST00000537842 IGKV2D-24A0A075B6R9 120 aa1.58□□□□□ -2.16
TNFRSF1A-210ENST00000537842 A0A087WX48 190 aa1.58□□□□□ -2.16
TNFRSF1A-210ENST00000537842 IGKV3OR2-268A0A0C4DH90 116 aa1.58□□□□□ -2.16
TNFRSF1A-210ENST00000537842 TRBV7-6A0A0J9YX20 115 aa1.58□□□□□ -2.16
TNFRSF1A-210ENST00000537842 LINC00959A0A1B0GUT2 108 aa1.58□□□□□ -2.16
TNFRSF1A-210ENST00000537842 A8MWP4 228 aa1.58□□□□□ -2.16
TNFRSF1A-210ENST00000537842 H3BPC8 53 aa1.58□□□□□ -2.16
TNFRSF1A-210ENST00000537842 H3BQ85 93 aa1.58□□□□□ -2.16
TNFRSF1A-210ENST00000537842 I3L3M4 83 aa1.58□□□□□ -2.16
TNFRSF1A-210ENST00000537842 ANGP03950 147 aaKnown RBP1.58□□□□□ -2.16
TNFRSF1A-210ENST00000537842 SMIM6P0DI80 62 aa1.58□□□□□ -2.16
TNFRSF1A-210ENST00000537842 CKS2P33552 79 aa1.58□□□□□ -2.16
TNFRSF1A-210ENST00000537842 IFI27P40305 119 aaPredicted RBP1.58□□□□□ -2.16
TNFRSF1A-210ENST00000537842 COX6A2Q02221 97 aa1.58□□□□□ -2.16
TNFRSF1A-210ENST00000537842 SEC11CQ9BY50 192 aa1.58□□□□□ -2.16
TNFRSF1A-210ENST00000537842 ST20Q9HBF5 79 aa1.58□□□□□ -2.16
TNFRSF1A-210ENST00000537842 UBE2D4Q9Y2X8 147 aa1.58□□□□□ -2.16
TNFRSF1A-210ENST00000537842 TRAV13-1A0A0B4J241 112 aa1.57□□□□□ -2.16
TNFRSF1A-210ENST00000537842 IGHV1-58A0A0C4DH39 117 aa1.57□□□□□ -2.16
TNFRSF1A-210ENST00000537842 LINC01546A6NGU7 62 aa1.57□□□□□ -2.16
TNFRSF1A-210ENST00000537842 IGIPA6NJ69 53 aa1.57□□□□□ -2.16
TNFRSF1A-210ENST00000537842 MT-ND4LP03901 98 aa1.57□□□□□ -2.16
TNFRSF1A-210ENST00000537842 S100A8P05109 93 aa1.57□□□□□ -2.16
TNFRSF1A-210ENST00000537842 XCL1P47992 114 aa1.57□□□□□ -2.16
TNFRSF1A-210ENST00000537842 HBBP68871 147 aa1.57□□□□□ -2.16
TNFRSF1A-210ENST00000537842 ELOBQ15370 118 aa1.57□□□□□ -2.16
TNFRSF1A-210ENST00000537842 LINC01554Q52M75 96 aa1.57□□□□□ -2.16
TNFRSF1A-210ENST00000537842 AMMECR1LQ6DCA0 310 aa1.57□□□□□ -2.16
TNFRSF1A-210ENST00000537842 SPINT4Q6UDR6 99 aa1.57□□□□□ -2.16
TNFRSF1A-210ENST00000537842 Q6ZUT4 128 aa1.57□□□□□ -2.16
TNFRSF1A-210ENST00000537842 KRTAP11-1Q8IUC1 163 aa1.57□□□□□ -2.16
TNFRSF1A-210ENST00000537842 ATOH7Q8N100 152 aa1.57□□□□□ -2.16
TNFRSF1A-210ENST00000537842 C9orf163Q8N9P6 203 aa1.57□□□□□ -2.16
TNFRSF1A-210ENST00000537842 ST20-AS1Q8NBB2 130 aa1.57□□□□□ -2.16
TNFRSF1A-210ENST00000537842 SMCR5Q8TEV8 140 aa1.57□□□□□ -2.16
TNFRSF1A-210ENST00000537842 PRELID3AQ96N28 172 aa1.57□□□□□ -2.16
TNFRSF1A-210ENST00000537842 C12orf57Q99622 126 aa1.57□□□□□ -2.16
TNFRSF1A-210ENST00000537842 C20orf78Q9BR46 151 aa1.57□□□□□ -2.16
TNFRSF1A-210ENST00000537842 SMIM2Q9BVW6 85 aa1.57□□□□□ -2.16
TNFRSF1A-210ENST00000537842 HIGD2AQ9BW72 106 aa1.57□□□□□ -2.16
TNFRSF1A-210ENST00000537842 LOC107984640A0A0U1RRK4 108 aa1.56□□□□□ -2.16
TNFRSF1A-210ENST00000537842 A0A1B0GV90 55 aa1.56□□□□□ -2.16
TNFRSF1A-210ENST00000537842 A0A1W2PNN7 141 aa1.56□□□□□ -2.16
TNFRSF1A-210ENST00000537842 COLCA2A8K830 154 aa1.56□□□□□ -2.16
TNFRSF1A-210ENST00000537842 TMEM256-PLSCR3K7ERE1 68 aa1.56□□□□□ -2.16
TNFRSF1A-210ENST00000537842 CCL25O15444 150 aa1.56□□□□□ -2.16
TNFRSF1A-210ENST00000537842 NUPR1O60356 82 aa1.56□□□□□ -2.16
TNFRSF1A-210ENST00000537842 APOC3P02656 99 aa1.56□□□□□ -2.16
TNFRSF1A-210ENST00000537842 MT-ND6P03923 174 aa1.56□□□□□ -2.16
TNFRSF1A-210ENST00000537842 FXYD2P54710 66 aa1.56□□□□□ -2.16
TNFRSF1A-210ENST00000537842 CNBPP62633 177 aaKnown RBP1.56□□□□□ -2.16
TNFRSF1A-210ENST00000537842 Q0VG73 95 aa1.56□□□□□ -2.16
TNFRSF1A-210ENST00000537842 CIRBPQ14011 172 aaKnown RBP1.56□□□□□ -2.16
TNFRSF1A-210ENST00000537842 Q5W150 140 aa1.56□□□□□ -2.16
TNFRSF1A-210ENST00000537842 C5orf38Q86SI9 138 aa1.56□□□□□ -2.16
TNFRSF1A-210ENST00000537842 Q8N8P6 123 aa1.56□□□□□ -2.16
TNFRSF1A-210ENST00000537842 AMELXQ99217 191 aa1.56□□□□□ -2.16
TNFRSF1A-210ENST00000537842 TIMM21Q9BVV7 248 aa1.56□□□□□ -2.16
TNFRSF1A-210ENST00000537842 ERG28Q9UKR5 140 aa1.56□□□□□ -2.16
TNFRSF1A-210ENST00000537842 MUC17Q685J3 4493 aa1.55□□□□□ -2.16
TNFRSF1A-210ENST00000537842 GVQW2A0A096LPI5 108 aaPredicted RBP1.55□□□□□ -2.16
TNFRSF1A-210ENST00000537842 TRAV16A0A0A6YYK6 109 aaPredicted RBP1.55□□□□□ -2.16
TNFRSF1A-210ENST00000537842 LINC00587B1AMM8 73 aa1.55□□□□□ -2.16
TNFRSF1A-210ENST00000537842 H3BMG7 143 aa1.55□□□□□ -2.16
TNFRSF1A-210ENST00000537842 J3QQQ9 107 aa1.55□□□□□ -2.16
TNFRSF1A-210ENST00000537842 INAFM2P0DMQ5 153 aa1.55□□□□□ -2.16
TNFRSF1A-210ENST00000537842 UBE2D1P51668 147 aa1.55□□□□□ -2.16
TNFRSF1A-210ENST00000537842 MRPS36P82909 103 aaKnown RBP1.55□□□□□ -2.16
TNFRSF1A-210ENST00000537842 PMCHL1Q16048 86 aa1.55□□□□□ -2.16
TNFRSF1A-210ENST00000537842 C9orf116Q5BN46 136 aaPredicted RBP1.55□□□□□ -2.16
TNFRSF1A-210ENST00000537842 Q5VSD8 79 aa1.55□□□□□ -2.16
TNFRSF1A-210ENST00000537842 C2orf82Q6UX34 121 aa1.55□□□□□ -2.16
TNFRSF1A-210ENST00000537842 HRCT1Q6UXD1 115 aa1.55□□□□□ -2.16
TNFRSF1A-210ENST00000537842 UNQ6190/PRO20217Q6UXQ8 127 aa1.55□□□□□ -2.16
TNFRSF1A-210ENST00000537842 C18orf32Q8TCD1 76 aa1.55□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms