RNA–Protein interactions for RNA: ENST00000537686.5

GGA3-201, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GGA3, Length 4,069 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-201ENST00000537686 H3BNG1 76 aa6.89□□□□□ -1.31
GGA3-201ENST00000537686 Q6ZVQ6 151 aa6.89□□□□□ -1.31
GGA3-201ENST00000537686 LINC01547P58512 204 aaPredicted RBP6.89□□□□□ -1.31
GGA3-201ENST00000537686 DEFB116Q30KQ4 102 aa6.89□□□□□ -1.31
GGA3-201ENST00000537686 LINC00208Q96KT6 92 aa6.89□□□□□ -1.31
GGA3-201ENST00000537686 TRAV7A0A075B6U4 112 aa6.88□□□□□ -1.31
GGA3-201ENST00000537686 LINC00167Q96N53 147 aa6.88□□□□□ -1.31
GGA3-201ENST00000537686 SMCR5Q8TEV8 140 aa6.87□□□□□ -1.31
GGA3-201ENST00000537686 SPTSSBQ8NFR3 76 aa6.86□□□□□ -1.31
GGA3-201ENST00000537686 FAM218AQ96MZ4 157 aa6.86□□□□□ -1.31
GGA3-201ENST00000537686 IGHV6-1A0A0B4J1U7 121 aa6.86□□□□□ -1.31
GGA3-201ENST00000537686 KIAA0087Q14695 138 aa6.85□□□□□ -1.31
GGA3-201ENST00000537686 CSNK1G2-AS1Q8NCQ2 148 aa6.85□□□□□ -1.31
GGA3-201ENST00000537686 LINC00588Q9Y4M8 146 aa6.84□□□□□ -1.31
GGA3-201ENST00000537686 ATP5EP56381 51 aaPredicted RBP6.84□□□□□ -1.32
GGA3-201ENST00000537686 NSD1Q96L73 2696 aaPredicted RBP6.84□□□□□ -1.32
GGA3-201ENST00000537686 C19orf73Q9NVV2 129 aa6.82□□□□□ -1.32
GGA3-201ENST00000537686 SPATA3Q8NHX4 192 aa6.82□□□□□ -1.32
GGA3-201ENST00000537686 GIG44P09565 113 aaPredicted RBP6.81□□□□□ -1.32
GGA3-201ENST00000537686 NBEAL2Q6ZNJ1 2754 aa6.81□□□□□ -1.32
GGA3-201ENST00000537686 KRTAP10-3P60369 221 aa6.81□□□□□ -1.32
GGA3-201ENST00000537686 LITAFQ99732 161 aa6.81□□□□□ -1.32
GGA3-201ENST00000537686 TRBV7-7A0A0K0K1E9 115 aa6.8□□□□□ -1.32
GGA3-201ENST00000537686 BSNQ9UPA5 3926 aa6.8□□□□□ -1.32
GGA3-201ENST00000537686 NBDYA0A0U1RRE5 68 aa6.79□□□□□ -1.32
GGA3-201ENST00000537686 EIF4EBP3O60516 100 aaPredicted RBP6.79□□□□□ -1.32
GGA3-201ENST00000537686 CHTF8P0CG12 524 aa6.78□□□□□ -1.32
GGA3-201ENST00000537686 PCOTHQ58A44 107 aa6.78□□□□□ -1.32
GGA3-201ENST00000537686 PHF5AQ7RTV0 110 aaKnown RBP6.78□□□□□ -1.32
GGA3-201ENST00000537686 HIVEP1P15822 2718 aa6.78□□□□□ -1.32
GGA3-201ENST00000537686 FBN2P35556 2912 aa6.78□□□□□ -1.32
GGA3-201ENST00000537686 ELOF1P60002 83 aaKnown RBP6.78□□□□□ -1.32
GGA3-201ENST00000537686 TMEM254Q8TBM7 123 aa6.78□□□□□ -1.32
GGA3-201ENST00000537686 DNAH10OSP0CZ25 163 aa6.77□□□□□ -1.33
GGA3-201ENST00000537686 NF1P21359 2839 aa6.77□□□□□ -1.33
GGA3-201ENST00000537686 Q6ZRP5 223 aa6.77□□□□□ -1.33
GGA3-201ENST00000537686 V9GYY9 64 aa6.77□□□□□ -1.33
GGA3-201ENST00000537686 GVQW2A0A096LPI5 108 aaPredicted RBP6.77□□□□□ -1.33
GGA3-201ENST00000537686 A0A0U1RQV1 116 aa6.77□□□□□ -1.33
GGA3-201ENST00000537686 Q6ZRX8 168 aa6.76□□□□□ -1.33
GGA3-201ENST00000537686 K7EIL1 84 aa6.76□□□□□ -1.33
GGA3-201ENST00000537686 MOBPQ13875 183 aa6.76□□□□□ -1.33
GGA3-201ENST00000537686 RETNLBQ9BQ08 111 aa6.76□□□□□ -1.33
GGA3-201ENST00000537686 SMIM26A0A096LP01 95 aa6.76□□□□□ -1.33
GGA3-201ENST00000537686 A6NED7 52 aa6.76□□□□□ -1.33
GGA3-201ENST00000537686 HCG22E2RYF7 251 aa6.76□□□□□ -1.33
GGA3-201ENST00000537686 KRTAP10-11P60412 298 aa6.76□□□□□ -1.33
GGA3-201ENST00000537686 CXCL6P80162 114 aa6.76□□□□□ -1.33
GGA3-201ENST00000537686 TRBV7-6A0A0J9YX20 115 aa6.75□□□□□ -1.33
GGA3-201ENST00000537686 H0Y9P7 68 aa6.75□□□□□ -1.33
GGA3-201ENST00000537686 VPREB1P12018 145 aa6.75□□□□□ -1.33
GGA3-201ENST00000537686 ST20-AS1Q8NBB2 130 aa6.74□□□□□ -1.33
GGA3-201ENST00000537686 C16orf90A8MZG2 172 aa6.74□□□□□ -1.33
GGA3-201ENST00000537686 Q8NBF4 154 aa6.74□□□□□ -1.33
GGA3-201ENST00000537686 TENM4Q6N022 2769 aa6.73□□□□□ -1.33
GGA3-201ENST00000537686 SERP1Q9Y6X1 66 aa6.73□□□□□ -1.33
GGA3-201ENST00000537686 LINC00476Q8WZB0 136 aa6.73□□□□□ -1.33
GGA3-201ENST00000537686 PRR15LQ9BU68 103 aa6.73□□□□□ -1.33
GGA3-201ENST00000537686 RTL8CO15255 209 aa6.72□□□□□ -1.33
GGA3-201ENST00000537686 PRR34Q9NV39 138 aa6.72□□□□□ -1.33
GGA3-201ENST00000537686 STAB2Q8WWQ8 2551 aa6.72□□□□□ -1.33
GGA3-201ENST00000537686 EPM2AB3EWF7 344 aa6.72□□□□□ -1.33
GGA3-201ENST00000537686 MXRA5Q9NR99 2828 aa6.72□□□□□ -1.33
GGA3-201ENST00000537686 K7ERS5 55 aa6.72□□□□□ -1.33
GGA3-201ENST00000537686 Q6ZQT0 140 aa6.72□□□□□ -1.33
GGA3-201ENST00000537686 SPACA4Q8TDM5 124 aa6.71□□□□□ -1.33
GGA3-201ENST00000537686 CSMD1Q96PZ7 3565 aa6.71□□□□□ -1.33
GGA3-201ENST00000537686 SMIM29Q86T20 159 aa6.71□□□□□ -1.34
GGA3-201ENST00000537686 FAM168BA1KXE4 195 aa6.71□□□□□ -1.34
GGA3-201ENST00000537686 LINC00612Q8N6U2 182 aa6.71□□□□□ -1.34
GGA3-201ENST00000537686 IGLV6-57P01721 117 aa6.71□□□□□ -1.34
GGA3-201ENST00000537686 KMT2BQ9UMN6 2715 aaPredicted RBP6.7□□□□□ -1.34
GGA3-201ENST00000537686 SERTAD4-AS1Q5TG53 156 aa6.7□□□□□ -1.34
GGA3-201ENST00000537686 LIMD2Q9BT23 127 aa6.7□□□□□ -1.34
GGA3-201ENST00000537686 CRYGAP11844 174 aa6.69□□□□□ -1.34
GGA3-201ENST00000537686 RPS28P62857 69 aaKnown RBP6.68□□□□□ -1.34
GGA3-201ENST00000537686 C1orf64Q8NEQ6 169 aa6.68□□□□□ -1.34
GGA3-201ENST00000537686 WWC2-AS2Q96NR7 200 aa6.68□□□□□ -1.34
GGA3-201ENST00000537686 SPINK1P00995 79 aa6.68□□□□□ -1.34
GGA3-201ENST00000537686 CELSR1Q9NYQ6 3014 aa6.68□□□□□ -1.34
GGA3-201ENST00000537686 LOC110117498A0A087WWA1 95 aa6.67□□□□□ -1.34
GGA3-201ENST00000537686 IGKV2D-30A0A075B6S6 120 aa6.67□□□□□ -1.34
GGA3-201ENST00000537686 IGKV2-30P06310 120 aa6.67□□□□□ -1.34
GGA3-201ENST00000537686 NIPBLQ6KC79 2804 aaeCLIP6.67□□□□□ -1.34
GGA3-201ENST00000537686 A0A1B0GW54 56 aa6.66□□□□□ -1.34
GGA3-201ENST00000537686 C15orf56Q8N910 161 aa6.66□□□□□ -1.34
GGA3-201ENST00000537686 BCE1O60756 84 aa6.66□□□□□ -1.34
GGA3-201ENST00000537686 hDV103S1A0JD37 113 aa6.65□□□□□ -1.34
GGA3-201ENST00000537686 LINC00528Q8N1L1 170 aa6.65□□□□□ -1.34
GGA3-201ENST00000537686 SVEP1Q4LDE5 3571 aa6.65□□□□□ -1.34
GGA3-201ENST00000537686 FLG2Q5D862 2391 aaPredicted RBP6.65□□□□□ -1.35
GGA3-201ENST00000537686 KCNQ1DNQ9H478 68 aa6.64□□□□□ -1.35
GGA3-201ENST00000537686 PSPHP1O15172 72 aa6.64□□□□□ -1.35
GGA3-201ENST00000537686 IGLV1-50A0A075B6I6 118 aa6.63□□□□□ -1.35
GGA3-201ENST00000537686 TM2D3Q9BRN9 247 aa6.62□□□□□ -1.35
GGA3-201ENST00000537686 RPL37AP61513 92 aaKnown RBP6.62□□□□□ -1.35
GGA3-201ENST00000537686 TRBV7-4A0A0J9YYF1 115 aa6.6□□□□□ -1.35
GGA3-201ENST00000537686 C9orf129Q5T035 196 aaKnown RBP6.6□□□□□ -1.35
GGA3-201ENST00000537686 TYMSOSQ8TAI1 123 aa6.6□□□□□ -1.35
GGA3-201ENST00000537686 TP53AIP1Q9HCN2 124 aa6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms