RNA–Protein interactions for RNA: ENST00000537582.1

SFSWAP-206, Transcript of splicing factor SWAP, humanhuman

TSL 2

Gene SFSWAP, Length 1,576 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-206ENST00000537582 KRTAP11-1Q8IUC1 163 aa9.83□□□□□ -0.84
SFSWAP-206ENST00000537582 LINC01600Q96MT4 127 aa9.83□□□□□ -0.84
SFSWAP-206ENST00000537582 PLAC8Q9NZF1 115 aa9.83□□□□□ -0.84
SFSWAP-206ENST00000537582 TRBV10-3A0A0K0K1G6 114 aa9.82□□□□□ -0.84
SFSWAP-206ENST00000537582 RPL37AP8A6NKH3 93 aa9.82□□□□□ -0.84
SFSWAP-206ENST00000537582 EPM2AB3EWF7 344 aa9.82□□□□□ -0.84
SFSWAP-206ENST00000537582 M0R378 163 aa9.82□□□□□ -0.84
SFSWAP-206ENST00000537582 MRPL55Q7Z7F7 128 aaKnown RBP9.82□□□□□ -0.84
SFSWAP-206ENST00000537582 OR13C6PQ8NH95 151 aa9.82□□□□□ -0.84
SFSWAP-206ENST00000537582 LINC00167Q96N53 147 aa9.82□□□□□ -0.84
SFSWAP-206ENST00000537582 H7C2G1 150 aa9.81□□□□□ -0.84
SFSWAP-206ENST00000537582 TRIAP1O43715 76 aa9.81□□□□□ -0.84
SFSWAP-206ENST00000537582 RPL13AP40429 203 aaKnown RBP9.81□□□□□ -0.84
SFSWAP-206ENST00000537582 TRBV10-2A0A0K0K1G8 114 aa9.8□□□□□ -0.84
SFSWAP-206ENST00000537582 ATXN8Q156A1 80 aa9.8□□□□□ -0.84
SFSWAP-206ENST00000537582 TEN1Q86WV5 123 aa9.8□□□□□ -0.84
SFSWAP-206ENST00000537582 IGLV6-57P01721 117 aa9.8□□□□□ -0.84
SFSWAP-206ENST00000537582 S100A7L2Q5SY68 101 aa9.8□□□□□ -0.84
SFSWAP-206ENST00000537582 PCP4P48539 62 aa9.79□□□□□ -0.84
SFSWAP-206ENST00000537582 TRAV13-2A0A0B4J235 113 aa9.78□□□□□ -0.84
SFSWAP-206ENST00000537582 COX6CP09669 75 aa9.78□□□□□ -0.84
SFSWAP-206ENST00000537582 PPDPFLQ8WWR9 84 aa9.78□□□□□ -0.84
SFSWAP-206ENST00000537582 SLC25A20O43772 301 aa9.77□□□□□ -0.85
SFSWAP-206ENST00000537582 APOBP04114 4563 aaKnown RBP9.77□□□□□ -0.85
SFSWAP-206ENST00000537582 XGP55808 180 aa9.77□□□□□ -0.85
SFSWAP-206ENST00000537582 IGLV1-50A0A075B6I6 118 aa9.76□□□□□ -0.85
SFSWAP-206ENST00000537582 C9JAW5 83 aa9.75□□□□□ -0.85
SFSWAP-206ENST00000537582 SMIM11BQ8TCY0 68 aa9.75□□□□□ -0.85
SFSWAP-206ENST00000537582 TMEM126AQ9H061 195 aa9.75□□□□□ -0.85
SFSWAP-206ENST00000537582 UBE2BP63146 152 aa9.75□□□□□ -0.85
SFSWAP-206ENST00000537582 ANKRD29Q8N6D5 301 aa9.74□□□□□ -0.85
SFSWAP-206ENST00000537582 TRAV23DV6A0A075B6W5 121 aa9.73□□□□□ -0.85
SFSWAP-206ENST00000537582 LST1O00453 97 aa9.73□□□□□ -0.85
SFSWAP-206ENST00000537582 H3BT86 120 aa9.71□□□□□ -0.85
SFSWAP-206ENST00000537582 KCNQ1DNQ9H478 68 aa9.71□□□□□ -0.85
SFSWAP-206ENST00000537582 C6orf99Q4VX62 202 aa9.7□□□□□ -0.86
SFSWAP-206ENST00000537582 ZNF73O43830 326 aaPredicted RBP9.69□□□□□ -0.86
SFSWAP-206ENST00000537582 SMR3BP02814 79 aaPredicted RBP9.69□□□□□ -0.86
SFSWAP-206ENST00000537582 PRYO14603 147 aa9.68□□□□□ -0.86
SFSWAP-206ENST00000537582 RPL28P46779 137 aaKnown RBP9.68□□□□□ -0.86
SFSWAP-206ENST00000537582 REG3GQ6UW15 175 aa9.68□□□□□ -0.86
SFSWAP-206ENST00000537582 SIGMAR1Q99720 223 aa9.68□□□□□ -0.86
SFSWAP-206ENST00000537582 PSORS1C2Q9UIG4 136 aa9.68□□□□□ -0.86
SFSWAP-206ENST00000537582 SCGB1A1P11684 91 aa9.67□□□□□ -0.86
SFSWAP-206ENST00000537582 CLEC2BQ92478 149 aa9.67□□□□□ -0.86
SFSWAP-206ENST00000537582 KRTAP4-16G5E9R7 235 aaPredicted RBP9.67□□□□□ -0.86
SFSWAP-206ENST00000537582 SPRR1AP35321 89 aa9.67□□□□□ -0.86
SFSWAP-206ENST00000537582 C21orf62-AS1Q17RA5 79 aa9.66□□□□□ -0.86
SFSWAP-206ENST00000537582 DIRC1Q969H9 104 aa9.66□□□□□ -0.86
SFSWAP-206ENST00000537582 CDIP1Q9H305 208 aa9.65□□□□□ -0.86
SFSWAP-206ENST00000537582 TRACP01848 142 aa9.64□□□□□ -0.87
SFSWAP-206ENST00000537582 PRLHP81277 87 aa9.63□□□□□ -0.87
SFSWAP-206ENST00000537582 HSPG2P98160 4391 aa9.63□□□□□ -0.87
SFSWAP-206ENST00000537582 KIAA1109Q2LD37 5005 aa9.63□□□□□ -0.87
SFSWAP-206ENST00000537582 C1orf137Q5JT78 98 aa9.63□□□□□ -0.87
SFSWAP-206ENST00000537582 FAM19A1Q7Z5A9 133 aa9.63□□□□□ -0.87
SFSWAP-206ENST00000537582 LINC00528Q8N1L1 170 aa9.63□□□□□ -0.87
SFSWAP-206ENST00000537582 ETDCA0A1B0GVM5 59 aa9.62□□□□□ -0.87
SFSWAP-206ENST00000537582 B5MCH6 92 aa9.62□□□□□ -0.87
SFSWAP-206ENST00000537582 BCE1O60756 84 aa9.62□□□□□ -0.87
SFSWAP-206ENST00000537582 CDK2AP2O75956 126 aa9.62□□□□□ -0.87
SFSWAP-206ENST00000537582 FAM218AQ96MZ4 157 aa9.62□□□□□ -0.87
SFSWAP-206ENST00000537582 KRTAP17-1Q9BYP8 105 aa9.62□□□□□ -0.87
SFSWAP-206ENST00000537582 RYR1P21817 5038 aa9.61□□□□□ -0.87
SFSWAP-206ENST00000537582 COX7BP24311 80 aa9.61□□□□□ -0.87
SFSWAP-206ENST00000537582 ELOF1P60002 83 aaKnown RBP9.61□□□□□ -0.87
SFSWAP-206ENST00000537582 FAT1Q14517 4588 aa9.6□□□□□ -0.87
SFSWAP-206ENST00000537582 Q6ZRX8 168 aa9.59□□□□□ -0.87
SFSWAP-206ENST00000537582 Q9BRP9 147 aa9.59□□□□□ -0.87
SFSWAP-206ENST00000537582 KRTAP13-1Q8IUC0 172 aa9.58□□□□□ -0.88
SFSWAP-206ENST00000537582 TEX49A0A1B0GTD5 131 aa9.58□□□□□ -0.88
SFSWAP-206ENST00000537582 UBE2AP49459 152 aa9.58□□□□□ -0.88
SFSWAP-206ENST00000537582 VPS13BQ7Z7G8 4022 aa9.57□□□□□ -0.88
SFSWAP-206ENST00000537582 TRBV7-6A0A0J9YX20 115 aa9.57□□□□□ -0.88
SFSWAP-206ENST00000537582 RPL37AP61513 92 aaKnown RBP9.57□□□□□ -0.88
SFSWAP-206ENST00000537582 H0YGX0 51 aa9.56□□□□□ -0.88
SFSWAP-206ENST00000537582 ERC2-IT1O76042 136 aa9.56□□□□□ -0.88
SFSWAP-206ENST00000537582 IGLV7-43P04211 117 aa9.56□□□□□ -0.88
SFSWAP-206ENST00000537582 LINC00575Q6W349 94 aa9.56□□□□□ -0.88
SFSWAP-206ENST00000537582 SMCR5Q8TEV8 140 aa9.56□□□□□ -0.88
SFSWAP-206ENST00000537582 FAM240AA0A1B0GVK7 77 aa9.55□□□□□ -0.88
SFSWAP-206ENST00000537582 KRTAP10-4P60372 401 aaPredicted RBP9.55□□□□□ -0.88
SFSWAP-206ENST00000537582 HIGD2AQ9BW72 106 aa9.55□□□□□ -0.88
SFSWAP-206ENST00000537582 SRRM2Q9UQ35 2752 aaKnown RBP9.55□□□□□ -0.88
SFSWAP-206ENST00000537582 BIRC6Q9NR09 4857 aa9.53□□□□□ -0.88
SFSWAP-206ENST00000537582 H0Y9J4 135 aa9.52□□□□□ -0.89
SFSWAP-206ENST00000537582 MT-ATP8P03928 68 aa9.52□□□□□ -0.89
SFSWAP-206ENST00000537582 ZNF861PO60384 105 aa9.51□□□□□ -0.89
SFSWAP-206ENST00000537582 hADV29S1A0JD25 119 aa9.5□□□□□ -0.89
SFSWAP-206ENST00000537582 BAALC-AS2P0C853 105 aa9.5□□□□□ -0.89
SFSWAP-206ENST00000537582 ST20-AS1Q8NBB2 130 aa9.5□□□□□ -0.89
SFSWAP-206ENST00000537582 DHRS4-AS1Q9P1J3 65 aa9.5□□□□□ -0.89
SFSWAP-206ENST00000537582 A0A1B0GX51 115 aa9.49□□□□□ -0.89
SFSWAP-206ENST00000537582 Q5VSD8 79 aa9.49□□□□□ -0.89
SFSWAP-206ENST00000537582 DNAL4O96015 105 aa9.48□□□□□ -0.89
SFSWAP-206ENST00000537582 FAM229AH3BQW9 127 aa9.47□□□□□ -0.89
SFSWAP-206ENST00000537582 ACYP1P07311 99 aa9.47□□□□□ -0.89
SFSWAP-206ENST00000537582 INAFM2P0DMQ5 153 aa9.47□□□□□ -0.89
SFSWAP-206ENST00000537582 Q6ZQY7 126 aa9.47□□□□□ -0.89
SFSWAP-206ENST00000537582 DEFB105AQ8NG35 78 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 114.5 ms