RNA–Protein interactions for RNA: ENST00000536218.5

LIG1-203, Transcript of DNA ligase 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LIG1, Length 3,179 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-203ENST00000536218 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.41□□□□□ -0.9
LIG1-203ENST00000536218 IGLV10-54A0A075B6I4 117 aa9.41□□□□□ -0.9
LIG1-203ENST00000536218 PRR4Q16378 134 aa9.41□□□□□ -0.9
LIG1-203ENST00000536218 Q6ZRP5 223 aa9.41□□□□□ -0.9
LIG1-203ENST00000536218 SPART-AS1P0CW21 52 aa9.4□□□□□ -0.9
LIG1-203ENST00000536218 KRTAP10-11P60412 298 aa9.4□□□□□ -0.9
LIG1-203ENST00000536218 LINC00269Q8N2A0 174 aa9.4□□□□□ -0.9
LIG1-203ENST00000536218 ERC2-IT1O76042 136 aa9.4□□□□□ -0.91
LIG1-203ENST00000536218 FAM30AQ9NZY2 134 aa9.39□□□□□ -0.91
LIG1-203ENST00000536218 OCR1Q9BZK8 76 aa9.39□□□□□ -0.91
LIG1-203ENST00000536218 hDV103S1A0JD37 113 aa9.38□□□□□ -0.91
LIG1-203ENST00000536218 ANGP03950 147 aaKnown RBP9.38□□□□□ -0.91
LIG1-203ENST00000536218 CD164Q04900 197 aa9.38□□□□□ -0.91
LIG1-203ENST00000536218 BAHCC1Q9P281 2608 aa9.38□□□□□ -0.91
LIG1-203ENST00000536218 Q8IZM0 81 aa9.38□□□□□ -0.91
LIG1-203ENST00000536218 C1orf64Q8NEQ6 169 aa9.37□□□□□ -0.91
LIG1-203ENST00000536218 CYSRT1A8MQ03 144 aa9.36□□□□□ -0.91
LIG1-203ENST00000536218 A8MU10 97 aa9.36□□□□□ -0.91
LIG1-203ENST00000536218 IGKV4-1P06312 121 aa9.36□□□□□ -0.91
LIG1-203ENST00000536218 MRPL55Q7Z7F7 128 aaKnown RBP9.35□□□□□ -0.91
LIG1-203ENST00000536218 TRAV22A0A0B4J277 110 aa9.34□□□□□ -0.91
LIG1-203ENST00000536218 A0A1B0GUV1 79 aa9.34□□□□□ -0.91
LIG1-203ENST00000536218 C3orf84H3BNL1 204 aa9.34□□□□□ -0.91
LIG1-203ENST00000536218 TENM3Q9P273 2699 aa9.34□□□□□ -0.91
LIG1-203ENST00000536218 Q1T7F1 81 aa9.33□□□□□ -0.92
LIG1-203ENST00000536218 C10orf25Q5T742 122 aa9.33□□□□□ -0.92
LIG1-203ENST00000536218 A8MUN3 132 aa9.32□□□□□ -0.92
LIG1-203ENST00000536218 REG3AQ06141 175 aa9.32□□□□□ -0.92
LIG1-203ENST00000536218 KLK12Q9UKR0 248 aa9.32□□□□□ -0.92
LIG1-203ENST00000536218 CHCHD10Q8WYQ3 142 aaPredicted RBP9.31□□□□□ -0.92
LIG1-203ENST00000536218 SMIM29Q86T20 159 aa9.31□□□□□ -0.92
LIG1-203ENST00000536218 ANK2Q01484 3957 aa9.29□□□□□ -0.92
LIG1-203ENST00000536218 COX7BP24311 80 aa9.29□□□□□ -0.92
LIG1-203ENST00000536218 SPTSSBQ8NFR3 76 aa9.29□□□□□ -0.92
LIG1-203ENST00000536218 COX17Q14061 63 aa9.29□□□□□ -0.92
LIG1-203ENST00000536218 DIRC1Q969H9 104 aa9.29□□□□□ -0.92
LIG1-203ENST00000536218 KIAA0087Q14695 138 aa9.28□□□□□ -0.92
LIG1-203ENST00000536218 UNQ6190/PRO20217Q6UXQ8 127 aa9.28□□□□□ -0.92
LIG1-203ENST00000536218 MGAM2Q2M2H8 2515 aa9.27□□□□□ -0.92
LIG1-203ENST00000536218 LELP1Q5T871 98 aa9.27□□□□□ -0.93
LIG1-203ENST00000536218 XAGE1AQ9HD64 81 aa9.27□□□□□ -0.93
LIG1-203ENST00000536218 A0A0J9YWU9 116 aa9.26□□□□□ -0.93
LIG1-203ENST00000536218 HIGD2BQ4VC39 106 aa9.26□□□□□ -0.93
LIG1-203ENST00000536218 KPRPQ5T749 579 aaPredicted RBP9.26□□□□□ -0.93
LIG1-203ENST00000536218 IGLV6-57P01721 117 aa9.25□□□□□ -0.93
LIG1-203ENST00000536218 SYCNQ0VAF6 134 aa9.25□□□□□ -0.93
LIG1-203ENST00000536218 EGFEM1PQ0D2K5 195 aa9.24□□□□□ -0.93
LIG1-203ENST00000536218 RBM12B-AS1Q9P1G2 102 aa9.24□□□□□ -0.93
LIG1-203ENST00000536218 H3BQ85 93 aa9.24□□□□□ -0.93
LIG1-203ENST00000536218 ZNF73O43830 326 aaPredicted RBP9.24□□□□□ -0.93
LIG1-203ENST00000536218 CHKB-CPT1BH3BT56 60 aa9.23□□□□□ -0.93
LIG1-203ENST00000536218 WFDC10BQ8IUB3 73 aa9.23□□□□□ -0.93
LIG1-203ENST00000536218 DEFB105AQ8NG35 78 aa9.22□□□□□ -0.93
LIG1-203ENST00000536218 PSCAO43653 123 aa9.21□□□□□ -0.94
LIG1-203ENST00000536218 SPAG11BQ08648 103 aa9.21□□□□□ -0.94
LIG1-203ENST00000536218 UBE2BP63146 152 aa9.2□□□□□ -0.94
LIG1-203ENST00000536218 C11orf45Q8TAV5 145 aa9.2□□□□□ -0.94
LIG1-203ENST00000536218 DEFB131BA0A096LNP1 70 aa9.2□□□□□ -0.94
LIG1-203ENST00000536218 KTN1-AS1Q86SY8 53 aa9.19□□□□□ -0.94
LIG1-203ENST00000536218 CMYA5Q8N3K9 4069 aa9.19□□□□□ -0.94
LIG1-203ENST00000536218 Q5VV11 94 aa9.18□□□□□ -0.94
LIG1-203ENST00000536218 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.17□□□□□ -0.94
LIG1-203ENST00000536218 ST20-AS1Q8NBB2 130 aa9.16□□□□□ -0.94
LIG1-203ENST00000536218 LINC00588Q9Y4M8 146 aa9.16□□□□□ -0.94
LIG1-203ENST00000536218 ELOF1P60002 83 aaKnown RBP9.16□□□□□ -0.94
LIG1-203ENST00000536218 PRR34Q9NV39 138 aa9.16□□□□□ -0.94
LIG1-203ENST00000536218 ETDCA0A1B0GVM5 59 aa9.15□□□□□ -0.95
LIG1-203ENST00000536218 C16orf90A8MZG2 172 aa9.15□□□□□ -0.95
LIG1-203ENST00000536218 UBE2AP49459 152 aa9.15□□□□□ -0.95
LIG1-203ENST00000536218 PRR15LQ9BU68 103 aa9.15□□□□□ -0.95
LIG1-203ENST00000536218 HCG22E2RYF7 251 aa9.13□□□□□ -0.95
LIG1-203ENST00000536218 M0R378 163 aa9.13□□□□□ -0.95
LIG1-203ENST00000536218 ZCCHC13Q8WW36 166 aaKnown RBP9.12□□□□□ -0.95
LIG1-203ENST00000536218 DEFB116Q30KQ4 102 aa9.11□□□□□ -0.95
LIG1-203ENST00000536218 H3BNG1 76 aa9.11□□□□□ -0.95
LIG1-203ENST00000536218 K7EIL1 84 aa9.11□□□□□ -0.95
LIG1-203ENST00000536218 IGKV2D-24A0A075B6R9 120 aa9.1□□□□□ -0.95
LIG1-203ENST00000536218 A6NED7 52 aa9.1□□□□□ -0.95
LIG1-203ENST00000536218 CYP4F30PQ9H0H9 118 aa9.1□□□□□ -0.95
LIG1-203ENST00000536218 LCE6AA0A183 80 aa9.09□□□□□ -0.95
LIG1-203ENST00000536218 B9D2Q9BPU9 175 aa9.08□□□□□ -0.96
LIG1-203ENST00000536218 K7EQZ3 153 aa9.08□□□□□ -0.96
LIG1-203ENST00000536218 CAMK2N2Q96S95 79 aa9.08□□□□□ -0.96
LIG1-203ENST00000536218 C6orf48Q9UBA6 75 aa9.08□□□□□ -0.96
LIG1-203ENST00000536218 LINC00528Q8N1L1 170 aa9.07□□□□□ -0.96
LIG1-203ENST00000536218 LINC00208Q96KT6 92 aa9.06□□□□□ -0.96
LIG1-203ENST00000536218 STAB2Q8WWQ8 2551 aa9.06□□□□□ -0.96
LIG1-203ENST00000536218 LCA10Q71F78 164 aa9.05□□□□□ -0.96
LIG1-203ENST00000536218 Q8N9P0 234 aaPredicted RBP9.05□□□□□ -0.96
LIG1-203ENST00000536218 C4orf48Q5BLP8 95 aa9.05□□□□□ -0.96
LIG1-203ENST00000536218 NDUFB1O75438 58 aa9.04□□□□□ -0.96
LIG1-203ENST00000536218 WFDC13Q8IUB5 93 aa9.04□□□□□ -0.96
LIG1-203ENST00000536218 MP68P56378 58 aa9.04□□□□□ -0.96
LIG1-203ENST00000536218 KRTAP26-1Q6PEX3 210 aa9.04□□□□□ -0.96
LIG1-203ENST00000536218 LIMD2Q9BT23 127 aa9.04□□□□□ -0.96
LIG1-203ENST00000536218 A0A1W2PNM2 257 aa9.03□□□□□ -0.96
LIG1-203ENST00000536218 ATP11AUNQ6ZP68 121 aa9.03□□□□□ -0.96
LIG1-203ENST00000536218 MDFIQ99750 246 aa9.03□□□□□ -0.96
LIG1-203ENST00000536218 DNAH3Q8TD57 4116 aa9.03□□□□□ -0.96
LIG1-203ENST00000536218 NDUFS5O43920 106 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 248.2 ms