RNA–Protein interactions for RNA: ENST00000535689.5

SNHG1-202, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 550 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-202ENST00000535689 BORCS7Q96B45 105 aa1.54□□□□□ -2.16
SNHG1-202ENST00000535689 TIMM21Q9BVV7 248 aa1.54□□□□□ -2.16
SNHG1-202ENST00000535689 TMEM242Q9NWH2 141 aa1.54□□□□□ -2.16
SNHG1-202ENST00000535689 TRBV27A0A0K0K1C4 114 aa1.53□□□□□ -2.16
SNHG1-202ENST00000535689 MUC21A0A140T8X8 626 aa1.53□□□□□ -2.16
SNHG1-202ENST00000535689 A6NED7 52 aa1.53□□□□□ -2.16
SNHG1-202ENST00000535689 LYRM1O43325 122 aa1.53□□□□□ -2.16
SNHG1-202ENST00000535689 MPC2O95563 127 aa1.53□□□□□ -2.16
SNHG1-202ENST00000535689 IGLC6P0CF74 106 aa1.53□□□□□ -2.16
SNHG1-202ENST00000535689 RAB5BP61020 215 aa1.53□□□□□ -2.16
SNHG1-202ENST00000535689 SEC11AP67812 179 aa1.53□□□□□ -2.16
SNHG1-202ENST00000535689 S100A12P80511 92 aa1.53□□□□□ -2.16
SNHG1-202ENST00000535689 KRTAP6-3Q3LI67 103 aa1.53□□□□□ -2.16
SNHG1-202ENST00000535689 C1orf195Q5TG92 126 aa1.53□□□□□ -2.16
SNHG1-202ENST00000535689 ATP5L2Q7Z4Y8 100 aa1.53□□□□□ -2.16
SNHG1-202ENST00000535689 COMMD7Q86VX2 200 aa1.53□□□□□ -2.16
SNHG1-202ENST00000535689 PPP1R1CQ8WVI7 109 aa1.53□□□□□ -2.16
SNHG1-202ENST00000535689 KRTAP4-1Q9BYQ7 146 aa1.53□□□□□ -2.16
SNHG1-202ENST00000535689 C6orf48Q9UBA6 75 aa1.53□□□□□ -2.16
SNHG1-202ENST00000535689 A0A1B0GW54 56 aa1.52□□□□□ -2.17
SNHG1-202ENST00000535689 INMT-MINDY4F8WBC2 141 aa1.52□□□□□ -2.17
SNHG1-202ENST00000535689 KRTAP5-8O75690 187 aa1.52□□□□□ -2.17
SNHG1-202ENST00000535689 SIX6O95475 246 aa1.52□□□□□ -2.17
SNHG1-202ENST00000535689 POLR2KP53803 58 aaKnown RBP1.52□□□□□ -2.17
SNHG1-202ENST00000535689 HERVK_113P63121 156 aa1.52□□□□□ -2.17
SNHG1-202ENST00000535689 HBBP68871 147 aa1.52□□□□□ -2.17
SNHG1-202ENST00000535689 PCOTHQ58A44 107 aa1.52□□□□□ -2.17
SNHG1-202ENST00000535689 PLEKHB2Q96CS7 222 aa1.52□□□□□ -2.17
SNHG1-202ENST00000535689 SMIM3Q9BZL3 60 aa1.52□□□□□ -2.17
SNHG1-202ENST00000535689 C20orf202A1L168 122 aa1.51□□□□□ -2.17
SNHG1-202ENST00000535689 F8VRH5 84 aa1.51□□□□□ -2.17
SNHG1-202ENST00000535689 G0S2P27469 103 aa1.51□□□□□ -2.17
SNHG1-202ENST00000535689 FOXA3P55318 350 aaPredicted RBP1.51□□□□□ -2.17
SNHG1-202ENST00000535689 MRPS36P82909 103 aaKnown RBP1.51□□□□□ -2.17
SNHG1-202ENST00000535689 KRTAP25-1Q3LHN0 102 aa1.51□□□□□ -2.17
SNHG1-202ENST00000535689 MRPL51Q4U2R6 128 aaKnown RBP1.51□□□□□ -2.17
SNHG1-202ENST00000535689 Q8IZM0 81 aa1.51□□□□□ -2.17
SNHG1-202ENST00000535689 ZCCHC13Q8WW36 166 aaKnown RBP1.51□□□□□ -2.17
SNHG1-202ENST00000535689 LIMD2Q9BT23 127 aa1.51□□□□□ -2.17
SNHG1-202ENST00000535689 CNFNQ9BYD5 112 aa1.51□□□□□ -2.17
SNHG1-202ENST00000535689 SPANXA1Q9NS26 97 aa1.51□□□□□ -2.17
SNHG1-202ENST00000535689 V9GYH0 126 aa1.51□□□□□ -2.17
SNHG1-202ENST00000535689 FLGP20930 4061 aaPredicted RBP1.51□□□□□ -2.17
SNHG1-202ENST00000535689 TRBV20-1A0A075B6N2 111 aa1.5□□□□□ -2.17
SNHG1-202ENST00000535689 MAP1LC3B2A6NCE7 125 aa1.5□□□□□ -2.17
SNHG1-202ENST00000535689 UMAD1C9J7I0 102 aa1.5□□□□□ -2.17
SNHG1-202ENST00000535689 ZNF73O43830 326 aaPredicted RBP1.5□□□□□ -2.17
SNHG1-202ENST00000535689 PDE6DO43924 150 aa1.5□□□□□ -2.17
SNHG1-202ENST00000535689 IL7P13232 177 aa1.5□□□□□ -2.17
SNHG1-202ENST00000535689 IFI27P40305 119 aaPredicted RBP1.5□□□□□ -2.17
SNHG1-202ENST00000535689 GNG4P50150 75 aa1.5□□□□□ -2.17
SNHG1-202ENST00000535689 DEFA3P59666 94 aa1.5□□□□□ -2.17
SNHG1-202ENST00000535689 KRTAP19-2Q3LHN2 52 aa1.5□□□□□ -2.17
SNHG1-202ENST00000535689 Q6Q795 121 aa1.5□□□□□ -2.17
SNHG1-202ENST00000535689 KRTAP13-1Q8IUC0 172 aa1.5□□□□□ -2.17
SNHG1-202ENST00000535689 KCNRGQ8N5I3 272 aa1.5□□□□□ -2.17
SNHG1-202ENST00000535689 RPL39LQ96EH5 51 aaKnown RBP1.5□□□□□ -2.17
SNHG1-202ENST00000535689 C20orf166-AS1Q96NR2 134 aa1.5□□□□□ -2.17
SNHG1-202ENST00000535689 C20orf78Q9BR46 151 aa1.5□□□□□ -2.17
SNHG1-202ENST00000535689 C2orf88Q9BSF0 95 aa1.5□□□□□ -2.17
SNHG1-202ENST00000535689 MAP1LC3BQ9GZQ8 125 aa1.5□□□□□ -2.17
SNHG1-202ENST00000535689 TMEM191AQ9H0A3 160 aa1.5□□□□□ -2.17
SNHG1-202ENST00000535689 TOMM7Q9P0U1 55 aa1.5□□□□□ -2.17
SNHG1-202ENST00000535689 TRBV20OR9-2A0A075B6H5 130 aa1.49□□□□□ -2.17
SNHG1-202ENST00000535689 PLA2G10O15496 165 aa1.49□□□□□ -2.17
SNHG1-202ENST00000535689 RPL35P42766 123 aaKnown RBP1.49□□□□□ -2.17
SNHG1-202ENST00000535689 LINC00313P59037 77 aa1.49□□□□□ -2.17
SNHG1-202ENST00000535689 CCL20P78556 96 aa1.49□□□□□ -2.17
SNHG1-202ENST00000535689 COX17Q14061 63 aa1.49□□□□□ -2.17
SNHG1-202ENST00000535689 KRTAP20-1Q3LI63 56 aa1.49□□□□□ -2.17
SNHG1-202ENST00000535689 C2orf82Q6UX34 121 aa1.49□□□□□ -2.17
SNHG1-202ENST00000535689 ATP11AUNQ6ZP68 121 aa1.49□□□□□ -2.17
SNHG1-202ENST00000535689 AKAP14Q86UN6 197 aa1.49□□□□□ -2.17
SNHG1-202ENST00000535689 SFT2D1Q8WV19 159 aa1.49□□□□□ -2.17
SNHG1-202ENST00000535689 MBD3L1Q8WWY6 194 aa1.49□□□□□ -2.17
SNHG1-202ENST00000535689 SPRR4Q96PI1 79 aa1.49□□□□□ -2.17
SNHG1-202ENST00000535689 TMEM126AQ9H061 195 aa1.49□□□□□ -2.17
SNHG1-202ENST00000535689 XAGE1AQ9HD64 81 aa1.49□□□□□ -2.17
SNHG1-202ENST00000535689 MANBALQ9NQG1 85 aa1.49□□□□□ -2.17
SNHG1-202ENST00000535689 FCGBPQ9Y6R7 5405 aaPredicted RBP1.49□□□□□ -2.17
SNHG1-202ENST00000535689 SSPOA2VEC9 5147 aa1.48□□□□□ -2.17
SNHG1-202ENST00000535689 A0A1B0GUT8 65 aa1.48□□□□□ -2.17
SNHG1-202ENST00000535689 A0A1W2PNM2 257 aa1.48□□□□□ -2.17
SNHG1-202ENST00000535689 LINC01549A6NIU2 74 aa1.48□□□□□ -2.17
SNHG1-202ENST00000535689 FABP9Q0Z7S8 132 aa1.48□□□□□ -2.17
SNHG1-202ENST00000535689 SFTA2Q6UW10 78 aa1.48□□□□□ -2.17
SNHG1-202ENST00000535689 LINC00299Q6ZSB3 139 aa1.48□□□□□ -2.17
SNHG1-202ENST00000535689 TMEM141Q96I45 108 aa1.48□□□□□ -2.17
SNHG1-202ENST00000535689 MACF1Q9UPN3 7388 aaKnown RBP1.47□□□□□ -2.17
SNHG1-202ENST00000535689 TRAV9-1A0A075B6T8 112 aa1.47□□□□□ -2.17
SNHG1-202ENST00000535689 ETDCA0A1B0GVM5 59 aa1.47□□□□□ -2.17
SNHG1-202ENST00000535689 NPYP01303 97 aa1.47□□□□□ -2.17
SNHG1-202ENST00000535689 PPBPP02775 128 aa1.47□□□□□ -2.17
SNHG1-202ENST00000535689 S100A8P05109 93 aa1.47□□□□□ -2.17
SNHG1-202ENST00000535689 PRLHP81277 87 aa1.47□□□□□ -2.17
SNHG1-202ENST00000535689 JOSD1Q15040 202 aaPredicted RBP1.47□□□□□ -2.17
SNHG1-202ENST00000535689 Q6ZUT4 128 aa1.47□□□□□ -2.17
SNHG1-202ENST00000535689 SMCR5Q8TEV8 140 aa1.47□□□□□ -2.17
SNHG1-202ENST00000535689 S100ZQ8WXG8 99 aa1.47□□□□□ -2.17
SNHG1-202ENST00000535689 MIEN1Q9BRT3 115 aa1.47□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 7.1 ms