RNA–Protein interactions for RNA: ENST00000535668.1

CLSTN3-206, Transcript of calsyntenin 3, humanhuman

TSL 3

Gene CLSTN3, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-206ENST00000535668 IGKV2-28A0A075B6P5 120 aa6.39□□□□□ -1.39
CLSTN3-206ENST00000535668 IGKV2D-28P01615 120 aa6.39□□□□□ -1.39
CLSTN3-206ENST00000535668 SPINK8P0C7L1 97 aa6.39□□□□□ -1.39
CLSTN3-206ENST00000535668 ASB16-AS1Q495Z4 193 aa6.39□□□□□ -1.39
CLSTN3-206ENST00000535668 ZNF625Q96I27 306 aaPredicted RBP6.39□□□□□ -1.39
CLSTN3-206ENST00000535668 RETNLBQ9BQ08 111 aa6.39□□□□□ -1.39
CLSTN3-206ENST00000535668 PPDPFQ9H3Y8 114 aa6.39□□□□□ -1.39
CLSTN3-206ENST00000535668 ERG28Q9UKR5 140 aa6.39□□□□□ -1.39
CLSTN3-206ENST00000535668 SMIM13P0DJ93 91 aa6.38□□□□□ -1.39
CLSTN3-206ENST00000535668 RPS29P62273 56 aaKnown RBP6.38□□□□□ -1.39
CLSTN3-206ENST00000535668 PRLHP81277 87 aa6.38□□□□□ -1.39
CLSTN3-206ENST00000535668 UBE2V1Q13404 147 aa6.38□□□□□ -1.39
CLSTN3-206ENST00000535668 Q6ZVH6 145 aa6.38□□□□□ -1.39
CLSTN3-206ENST00000535668 GTF2H5Q6ZYL4 71 aa6.38□□□□□ -1.39
CLSTN3-206ENST00000535668 C9orf118A6NHY6 69 aa6.37□□□□□ -1.39
CLSTN3-206ENST00000535668 TMEM238C9JI98 176 aa6.37□□□□□ -1.39
CLSTN3-206ENST00000535668 ZNF22P17026 224 aaPredicted RBP6.37□□□□□ -1.39
CLSTN3-206ENST00000535668 SPRR1AP35321 89 aa6.37□□□□□ -1.39
CLSTN3-206ENST00000535668 KRTAP13-3Q3SY46 172 aa6.37□□□□□ -1.39
CLSTN3-206ENST00000535668 FAM19A1Q7Z5A9 133 aa6.37□□□□□ -1.39
CLSTN3-206ENST00000535668 PCP2Q8IVA1 136 aa6.37□□□□□ -1.39
CLSTN3-206ENST00000535668 CEND1Q8N111 149 aa6.37□□□□□ -1.39
CLSTN3-206ENST00000535668 Q8NDZ9 215 aa6.37□□□□□ -1.39
CLSTN3-206ENST00000535668 SPRR4Q96PI1 79 aa6.37□□□□□ -1.39
CLSTN3-206ENST00000535668 SPANXB1Q9NS25 103 aaPredicted RBP6.37□□□□□ -1.39
CLSTN3-206ENST00000535668 KRTAP4-16G5E9R7 235 aaPredicted RBP6.36□□□□□ -1.39
CLSTN3-206ENST00000535668 TAX1BP3O14907 124 aa6.36□□□□□ -1.39
CLSTN3-206ENST00000535668 LEPROTO15243 131 aa6.36□□□□□ -1.39
CLSTN3-206ENST00000535668 LCE2DQ5TA82 110 aaPredicted RBP6.36□□□□□ -1.39
CLSTN3-206ENST00000535668 A0A1B0GWB2 263 aa6.35□□□□□ -1.39
CLSTN3-206ENST00000535668 SPINK1P00995 79 aa6.35□□□□□ -1.39
CLSTN3-206ENST00000535668 PFN2P35080 140 aa6.35□□□□□ -1.39
CLSTN3-206ENST00000535668 LINC00483Q53H64 154 aa6.35□□□□□ -1.39
CLSTN3-206ENST00000535668 C3orf22Q8N5N4 141 aa6.35□□□□□ -1.39
CLSTN3-206ENST00000535668 LINC00337Q8N6G1 96 aa6.35□□□□□ -1.39
CLSTN3-206ENST00000535668 COPS9Q8WXC6 57 aa6.35□□□□□ -1.39
CLSTN3-206ENST00000535668 KCNQ1DNQ9H478 68 aa6.35□□□□□ -1.39
CLSTN3-206ENST00000535668 ZNF706Q9Y5V0 76 aaPredicted RBP6.35□□□□□ -1.39
CLSTN3-206ENST00000535668 TMEM223A0PJW6 202 aa6.34□□□□□ -1.39
CLSTN3-206ENST00000535668 LGALS3P17931 250 aaKnown RBP6.34□□□□□ -1.39
CLSTN3-206ENST00000535668 VAMP3Q15836 100 aa6.34□□□□□ -1.39
CLSTN3-206ENST00000535668 LYRM7Q5U5X0 104 aa6.34□□□□□ -1.39
CLSTN3-206ENST00000535668 HIST1H4GQ99525 98 aa6.34□□□□□ -1.39
CLSTN3-206ENST00000535668 ZNF815PA8K554 130 aa6.33□□□□□ -1.4
CLSTN3-206ENST00000535668 J3QQQ9 107 aa6.33□□□□□ -1.4
CLSTN3-206ENST00000535668 TMEM170BQ5T4T1 132 aa6.33□□□□□ -1.4
CLSTN3-206ENST00000535668 SCGB1D4Q6XE38 83 aa6.33□□□□□ -1.4
CLSTN3-206ENST00000535668 LOC107984156A0A0G2JMH3 177 aa6.32□□□□□ -1.4
CLSTN3-206ENST00000535668 A0A0J9YXY3 114 aa6.32□□□□□ -1.4
CLSTN3-206ENST00000535668 PRYO14603 147 aa6.32□□□□□ -1.4
CLSTN3-206ENST00000535668 TIMM17BO60830 172 aa6.32□□□□□ -1.4
CLSTN3-206ENST00000535668 FABP2P12104 132 aa6.32□□□□□ -1.4
CLSTN3-206ENST00000535668 ARL17AQ8IVW1 177 aa6.32□□□□□ -1.4
CLSTN3-206ENST00000535668 SVIPQ8NHG7 77 aa6.31□□□□□ -1.4
CLSTN3-206ENST00000535668 IFITM1P13164 125 aa6.3□□□□□ -1.4
CLSTN3-206ENST00000535668 HIGD2AQ9BW72 106 aa6.3□□□□□ -1.4
CLSTN3-206ENST00000535668 A0A1W2PPM0 123 aa6.29□□□□□ -1.4
CLSTN3-206ENST00000535668 SEC61BP60468 96 aaKnown RBP6.29□□□□□ -1.4
CLSTN3-206ENST00000535668 C4orf48Q5BLP8 95 aa6.29□□□□□ -1.4
CLSTN3-206ENST00000535668 SSBP3-AS1Q7Z2R9 100 aa6.29□□□□□ -1.4
CLSTN3-206ENST00000535668 K7EP34 96 aa6.28□□□□□ -1.4
CLSTN3-206ENST00000535668 HERV-K104P63124 156 aa6.28□□□□□ -1.4
CLSTN3-206ENST00000535668 XP32Q5T750 250 aa6.28□□□□□ -1.4
CLSTN3-206ENST00000535668 Q8NBF4 154 aa6.28□□□□□ -1.4
CLSTN3-206ENST00000535668 KRTAP4-1Q9BYQ7 146 aa6.28□□□□□ -1.4
CLSTN3-206ENST00000535668 TRBV20-1A0A075B6N2 111 aa6.27□□□□□ -1.41
CLSTN3-206ENST00000535668 FXYD2P54710 66 aa6.27□□□□□ -1.41
CLSTN3-206ENST00000535668 SMCR5Q8TEV8 140 aa6.27□□□□□ -1.41
CLSTN3-206ENST00000535668 SPANXDQ9BXN6 97 aa6.27□□□□□ -1.41
CLSTN3-206ENST00000535668 SPANXCQ9NY87 97 aa6.27□□□□□ -1.41
CLSTN3-206ENST00000535668 A0A0B4J2C4 111 aa6.26□□□□□ -1.41
CLSTN3-206ENST00000535668 F8W1H4 67 aa6.26□□□□□ -1.41
CLSTN3-206ENST00000535668 H3BUT2 72 aa6.26□□□□□ -1.41
CLSTN3-206ENST00000535668 LINC01547P58512 204 aaPredicted RBP6.26□□□□□ -1.41
CLSTN3-206ENST00000535668 Q8N377 158 aa6.26□□□□□ -1.41
CLSTN3-206ENST00000535668 NHP2Q9NX24 153 aaKnown RBP6.26□□□□□ -1.41
CLSTN3-206ENST00000535668 TRBV10-2A0A0K0K1G8 114 aa6.25□□□□□ -1.41
CLSTN3-206ENST00000535668 LINC00158P58513 81 aa6.25□□□□□ -1.41
CLSTN3-206ENST00000535668 SPCS1Q9Y6A9 102 aa6.25□□□□□ -1.41
CLSTN3-206ENST00000535668 SLC25A20O43772 301 aa6.24□□□□□ -1.41
CLSTN3-206ENST00000535668 LCE2CQ5TA81 110 aa6.24□□□□□ -1.41
CLSTN3-206ENST00000535668 TTTY13Q9BZ97 58 aa6.24□□□□□ -1.41
CLSTN3-206ENST00000535668 NDUFA12Q9UI09 145 aa6.24□□□□□ -1.41
CLSTN3-206ENST00000535668 B5MCH6 92 aa6.23□□□□□ -1.41
CLSTN3-206ENST00000535668 K7ERU9 68 aa6.23□□□□□ -1.41
CLSTN3-206ENST00000535668 KRTAP19-2Q3LHN2 52 aa6.23□□□□□ -1.41
CLSTN3-206ENST00000535668 PRO1854Q9UHT4 67 aa6.23□□□□□ -1.41
CLSTN3-206ENST00000535668 TRBV10-3A0A0K0K1G6 114 aa6.22□□□□□ -1.41
CLSTN3-206ENST00000535668 J3QR89 54 aa6.22□□□□□ -1.41
CLSTN3-206ENST00000535668 MIR7-3HGQ8N6C7 128 aa6.22□□□□□ -1.41
CLSTN3-206ENST00000535668 DAND5Q8N907 189 aa6.22□□□□□ -1.41
CLSTN3-206ENST00000535668 FSIP2Q5CZC0 6907 aa6.22□□□□□ -1.41
CLSTN3-206ENST00000535668 ETDCA0A1B0GVM5 59 aa6.21□□□□□ -1.42
CLSTN3-206ENST00000535668 Q6ZRX8 168 aa6.21□□□□□ -1.42
CLSTN3-206ENST00000535668 RAB37Q96AX2 223 aa6.21□□□□□ -1.42
CLSTN3-206ENST00000535668 NDUFC2O95298 119 aa6.2□□□□□ -1.42
CLSTN3-206ENST00000535668 IGLV6-57P01721 117 aa6.2□□□□□ -1.42
CLSTN3-206ENST00000535668 COX6CP09669 75 aa6.2□□□□□ -1.42
CLSTN3-206ENST00000535668 TSPEAR-AS2P59090 65 aa6.2□□□□□ -1.42
CLSTN3-206ENST00000535668 Q9BRP9 147 aa6.2□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 91 ms