RNA–Protein interactions for RNA: ENST00000535406.5

CDCA3-204, Transcript of cell division cycle associated 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CDCA3, Length 1,327 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-204ENST00000535406 LINC00337Q8N6G1 96 aa5.54□□□□□ -1.52
CDCA3-204ENST00000535406 KCNQ1DNQ9H478 68 aa5.54□□□□□ -1.52
CDCA3-204ENST00000535406 SPANXB1Q9NS25 103 aaPredicted RBP5.54□□□□□ -1.52
CDCA3-204ENST00000535406 LPAP08519 4548 aa5.54□□□□□ -1.52
CDCA3-204ENST00000535406 TRBV10-2A0A0K0K1G8 114 aa5.53□□□□□ -1.52
CDCA3-204ENST00000535406 LINC01545Q5VT33 79 aa5.53□□□□□ -1.52
CDCA3-204ENST00000535406 PET117Q6UWS5 81 aa5.53□□□□□ -1.52
CDCA3-204ENST00000535406 ZNF706Q9Y5V0 76 aaPredicted RBP5.53□□□□□ -1.52
CDCA3-204ENST00000535406 A0A0J9YXY3 114 aa5.52□□□□□ -1.53
CDCA3-204ENST00000535406 NDUFC2O95298 119 aa5.52□□□□□ -1.53
CDCA3-204ENST00000535406 DDTP30046 118 aa5.52□□□□□ -1.53
CDCA3-204ENST00000535406 NPC2P61916 151 aa5.52□□□□□ -1.53
CDCA3-204ENST00000535406 COA6Q5JTJ3 125 aaKnown RBP5.52□□□□□ -1.53
CDCA3-204ENST00000535406 LINC00304Q8N9R0 145 aa5.52□□□□□ -1.53
CDCA3-204ENST00000535406 RNF213Q63HN8 5207 aa5.52□□□□□ -1.53
CDCA3-204ENST00000535406 KRTAP4-16G5E9R7 235 aaPredicted RBP5.51□□□□□ -1.53
CDCA3-204ENST00000535406 C3orf79P0CE67 100 aa5.51□□□□□ -1.53
CDCA3-204ENST00000535406 S100A7L2Q5SY68 101 aa5.51□□□□□ -1.53
CDCA3-204ENST00000535406 LCE3BQ5TA77 95 aa5.51□□□□□ -1.53
CDCA3-204ENST00000535406 SPRR4Q96PI1 79 aa5.51□□□□□ -1.53
CDCA3-204ENST00000535406 KRTDAPP60985 99 aa5.5□□□□□ -1.53
CDCA3-204ENST00000535406 ADAMTSL4-AS1Q5T5F5 129 aa5.5□□□□□ -1.53
CDCA3-204ENST00000535406 SOSTDC1Q6X4U4 206 aa5.5□□□□□ -1.53
CDCA3-204ENST00000535406 C3orf22Q8N5N4 141 aa5.5□□□□□ -1.53
CDCA3-204ENST00000535406 C20orf202A1L168 122 aa5.49□□□□□ -1.53
CDCA3-204ENST00000535406 ZNF815PA8K554 130 aa5.49□□□□□ -1.53
CDCA3-204ENST00000535406 IGLV6-57P01721 117 aa5.49□□□□□ -1.53
CDCA3-204ENST00000535406 SMCR5Q8TEV8 140 aa5.49□□□□□ -1.53
CDCA3-204ENST00000535406 TRAV23DV6A0A075B6W5 121 aa5.48□□□□□ -1.53
CDCA3-204ENST00000535406 TIMM17BO60830 172 aa5.48□□□□□ -1.53
CDCA3-204ENST00000535406 Q6ZRX8 168 aa5.48□□□□□ -1.53
CDCA3-204ENST00000535406 LINC00308Q8TCZ7 52 aa5.48□□□□□ -1.53
CDCA3-204ENST00000535406 LITAFQ99732 161 aa5.48□□□□□ -1.53
CDCA3-204ENST00000535406 TTTY13Q9BZ97 58 aa5.48□□□□□ -1.53
CDCA3-204ENST00000535406 PPDPFQ9H3Y8 114 aa5.48□□□□□ -1.53
CDCA3-204ENST00000535406 SPANXCQ9NY87 97 aa5.48□□□□□ -1.53
CDCA3-204ENST00000535406 ZNF73O43830 326 aaPredicted RBP5.47□□□□□ -1.53
CDCA3-204ENST00000535406 CTAG1AP78358 180 aa5.47□□□□□ -1.53
CDCA3-204ENST00000535406 JOSD1Q15040 202 aaPredicted RBP5.47□□□□□ -1.53
CDCA3-204ENST00000535406 RETNLBQ9BQ08 111 aa5.47□□□□□ -1.53
CDCA3-204ENST00000535406 Q9BRP9 147 aa5.47□□□□□ -1.53
CDCA3-204ENST00000535406 CBY1Q9Y3M2 126 aa5.47□□□□□ -1.53
CDCA3-204ENST00000535406 LINC00483Q53H64 154 aa5.46□□□□□ -1.54
CDCA3-204ENST00000535406 GAGE2AQ6NT46 116 aa5.46□□□□□ -1.54
CDCA3-204ENST00000535406 SCGB1D4Q6XE38 83 aa5.46□□□□□ -1.54
CDCA3-204ENST00000535406 ERC2-IT1O76042 136 aa5.45□□□□□ -1.54
CDCA3-204ENST00000535406 AKR1D1P51857 326 aa5.45□□□□□ -1.54
CDCA3-204ENST00000535406 SPAG11AQ6PDA7 123 aa5.45□□□□□ -1.54
CDCA3-204ENST00000535406 ATOH7Q8N100 152 aa5.45□□□□□ -1.54
CDCA3-204ENST00000535406 OR13C6PQ8NH95 151 aa5.45□□□□□ -1.54
CDCA3-204ENST00000535406 HINT1P49773 126 aaPredicted RBP5.44□□□□□ -1.54
CDCA3-204ENST00000535406 Q8NBF4 154 aa5.44□□□□□ -1.54
CDCA3-204ENST00000535406 SPANXDQ9BXN6 97 aa5.44□□□□□ -1.54
CDCA3-204ENST00000535406 IGLV9-49A0A0B4J1Y8 123 aa5.43□□□□□ -1.54
CDCA3-204ENST00000535406 S100A1P23297 94 aa5.43□□□□□ -1.54
CDCA3-204ENST00000535406 MOBPQ13875 183 aa5.43□□□□□ -1.54
CDCA3-204ENST00000535406 KRTAP9-9Q9BYP9 154 aa5.43□□□□□ -1.54
CDCA3-204ENST00000535406 KRTAP9-4Q9BYQ2 154 aa5.43□□□□□ -1.54
CDCA3-204ENST00000535406 KRTAP4-8A0A0G2JLE6 195 aa5.42□□□□□ -1.54
CDCA3-204ENST00000535406 S100A2P29034 98 aa5.42□□□□□ -1.54
CDCA3-204ENST00000535406 LINC00518Q8N0U6 118 aa5.42□□□□□ -1.54
CDCA3-204ENST00000535406 HIST3H2BBQ8N257 126 aa5.42□□□□□ -1.54
CDCA3-204ENST00000535406 COPS9Q8WXC6 57 aa5.42□□□□□ -1.54
CDCA3-204ENST00000535406 IGLV7-46A0A075B6I9 117 aa5.41□□□□□ -1.54
CDCA3-204ENST00000535406 PCP2Q8IVA1 136 aa5.41□□□□□ -1.54
CDCA3-204ENST00000535406 C5orf52A6NGY3 159 aa5.4□□□□□ -1.55
CDCA3-204ENST00000535406 SPINK1P00995 79 aa5.4□□□□□ -1.55
CDCA3-204ENST00000535406 S100A6P06703 90 aa5.4□□□□□ -1.55
CDCA3-204ENST00000535406 IFITM1P13164 125 aa5.4□□□□□ -1.55
CDCA3-204ENST00000535406 SNRPEP62304 92 aaKnown RBP5.4□□□□□ -1.55
CDCA3-204ENST00000535406 TPRXLQ17RH7 258 aa5.4□□□□□ -1.55
CDCA3-204ENST00000535406 Q6ZVH6 145 aa5.4□□□□□ -1.55
CDCA3-204ENST00000535406 HIST1H2BLQ99880 126 aa5.4□□□□□ -1.55
CDCA3-204ENST00000535406 C6orf99Q4VX62 202 aa5.39□□□□□ -1.55
CDCA3-204ENST00000535406 C9orf153Q5TBE3 101 aa5.39□□□□□ -1.55
CDCA3-204ENST00000535406 SSBP3-AS1Q7Z2R9 100 aa5.39□□□□□ -1.55
CDCA3-204ENST00000535406 ST20-AS1Q8NBB2 130 aa5.39□□□□□ -1.55
CDCA3-204ENST00000535406 DHRS4-AS1Q9P1J3 65 aa5.39□□□□□ -1.55
CDCA3-204ENST00000535406 HSBP1L1C9JCN9 74 aa5.38□□□□□ -1.55
CDCA3-204ENST00000535406 COX7BP24311 80 aa5.38□□□□□ -1.55
CDCA3-204ENST00000535406 ELOF1P60002 83 aaKnown RBP5.38□□□□□ -1.55
CDCA3-204ENST00000535406 FP248Q71RG6 208 aaPredicted RBP5.38□□□□□ -1.55
CDCA3-204ENST00000535406 A6NDN8 102 aa5.37□□□□□ -1.55
CDCA3-204ENST00000535406 RPS29P62273 56 aaKnown RBP5.37□□□□□ -1.55
CDCA3-204ENST00000535406 MUSTN1Q8IVN3 82 aa5.37□□□□□ -1.55
CDCA3-204ENST00000535406 SLC25A34Q6PIV7 304 aa5.36□□□□□ -1.55
CDCA3-204ENST00000535406 MUC2Q02817 5179 aa5.36□□□□□ -1.55
CDCA3-204ENST00000535406 TRBV7-6A0A0J9YX20 115 aa5.35□□□□□ -1.55
CDCA3-204ENST00000535406 SPRR1BP22528 89 aa5.35□□□□□ -1.55
CDCA3-204ENST00000535406 TRAV13-2A0A0B4J235 113 aa5.34□□□□□ -1.55
CDCA3-204ENST00000535406 A0A1B0GWB2 263 aa5.34□□□□□ -1.55
CDCA3-204ENST00000535406 Q8N377 158 aa5.34□□□□□ -1.55
CDCA3-204ENST00000535406 LAMTOR3Q9UHA4 124 aa5.34□□□□□ -1.55
CDCA3-204ENST00000535406 SLC25A20O43772 301 aa5.33□□□□□ -1.56
CDCA3-204ENST00000535406 KRTAP4-12Q9BQ66 201 aa5.33□□□□□ -1.56
CDCA3-204ENST00000535406 A0A0U1RQV1 116 aa5.32□□□□□ -1.56
CDCA3-204ENST00000535406 TAL2Q16559 108 aa5.32□□□□□ -1.56
CDCA3-204ENST00000535406 DEFB105AQ8NG35 78 aa5.32□□□□□ -1.56
CDCA3-204ENST00000535406 TEX49A0A1B0GTD5 131 aa5.31□□□□□ -1.56
CDCA3-204ENST00000535406 A4D1N5 150 aa5.31□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms